Guide to the Human Genome
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Name: BARX2 Sequence: fasta or formatted (279aa) NCBI GI: 6633798
Description:

BarH-like homeobox 2

Referenced in:

Homeobox and Related Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         19           2
 C cysteine            2.2          6           1
 D aspartate           2.2          6           1
 E glutamate          10.0         28           2
 F phenylalanine       1.4          4           1
 G glycine             4.3         12           2
 H histidine           1.8          5           1
 I isoleucine          3.2          9           1
 K lysine              7.9         22           2
 L leucine            10.4         29           2
 M methionine          2.5          7           1
 N asparagine          1.1          3           1
 P proline            10.8         30           3
 Q glutamine           7.9         22           1
 R arginine            5.7         16           3
 S serine              9.3         26           2
 T threonine           5.7         16           1
 V valine              3.9         11           2
 W tryptophan          0.7          2           1
 Y tyrosine            2.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BarH-like homeobox 2 
BARX1                 0.264   BarH-like homeobox 1 
BARHL1                0.125   BarH-like homeobox 1 
BARHL2                0.125   BarH-like homeobox 2 
HLX                   0.123   H2.0-like homeobox 
BSX                   0.123   brain specific homeobox 
NKX1-1                0.115   PREDICTED: NK1 homeobox 1 
DLX4                  0.115   distal-less homeobox 4 isoform a 
NKX1-1                0.114   PREDICTED: NK1 homeobox 1 
NKX1-1                0.114   PREDICTED: HPX-153 homeobox 
NKX1-2                0.112   NK1 homeobox 2 
NKX1-2                0.112   PREDICTED: NK1 homeobox 2 
NKX1-2                0.112   PREDICTED: NK1 homeobox 2 
NKX1-2                0.112   PREDICTED: NK1 homeobox 2 
DLX2                  0.110   distal-less homeobox 2 
DLX3                  0.106   distal-less homeobox 3 
MNX1                  0.106   homeo box HB9 
DLX1                  0.106   distal-less homeobox 1 isoform 1 
HOXA3                 0.106   homeobox A3 isoform a 
HOXA3                 0.106   homeobox A3 isoform a 
DLX5                  0.104   distal-less homeobox 5 
HOXA3                 0.102   homeobox A3 isoform b 
DLX4                  0.102   distal-less homeobox 4 isoform b 
DLX6                  0.102   distal-less homeobox 6 
HOXC4                 0.097   homeobox C4 
HOXC4                 0.097   homeobox C4 
TLX1                  0.097   T-cell leukemia homeobox 1 
NKX3-2                0.097   NK3 homeobox 2 
NKX2-3                0.097   NK2 transcription factor related, locus 3 
GBX2                  0.097   gastrulation brain homeo box 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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