Guide to the Human Genome
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Name: DLX1 Sequence: fasta or formatted (129aa) NCBI GI: 84043956
Description:

distal-less homeobox 1 isoform 2

Referenced in:

Homeobox and Related Proteins

Other entries for this name:
alt prot [255aa] distal-less homeobox 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         10           1
 C cysteine            0.8          1           1
 D aspartate           3.1          4           1
 E glutamate           3.9          5           1
 F phenylalanine       2.3          3           1
 G glycine            10.1         13           2
 H histidine           4.7          6           1
 I isoleucine          1.6          2           1
 K lysine              1.6          2           1
 L leucine             4.7          6           1
 M methionine          5.4          7           1
 N asparagine          2.3          3           1
 P proline            10.1         13           2
 Q glutamine           7.0          9           2
 R arginine            1.6          2           1
 S serine             20.2         26           2
 T threonine           2.3          3           2
 V valine              5.4          7           1
 W tryptophan          0.8          1           1
 Y tyrosine            4.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   distal-less homeobox 1 isoform 2 
DLX1                  0.818   distal-less homeobox 1 isoform 1 
DLX6                  0.186   distal-less homeobox 6 
SPATC1                0.066   spermatogenesis and centriole associated 1 isoform ...
SPATC1                0.066   spermatogenesis and centriole associated 1 isoform ...
SSFA2                 0.050   sperm specific antigen 2 isoform 1 
SSFA2                 0.050   sperm specific antigen 2 isoform 2 
REV3L                 0.037   DNA polymerase zeta 
ZNF395                0.029   zinc finger protein 395 
COL6A2                0.025   alpha 2 type VI collagen isoform 2C2 precursor [Hom...
ZNF750                0.025   zinc finger protein 750 
PUM2                  0.021   pumilio homolog 2 
MED1                  0.021   mediator complex subunit 1 
SCN5A                 0.021   voltage-gated sodium channel type V alpha isoform f...
SCN5A                 0.021   voltage-gated sodium channel type V alpha isoform e...
SCN5A                 0.021   voltage-gated sodium channel type V alpha isoform a ...
SCN5A                 0.021   voltage-gated sodium channel type V alpha isoform b ...
SCN5A                 0.021   voltage-gated sodium channel type V alpha isoform d...
SCN5A                 0.021   voltage-gated sodium channel type V alpha isoform c...
FBRSL1                0.021   fibrosin-like 1 
SEC31A                0.021   SEC31 homolog A isoform 3 
SEC31A                0.021   SEC31 homolog A isoform 1 
ZMYM2                 0.021   zinc finger protein 198 
ZMYM2                 0.021   zinc finger protein 198 
SEC31A                0.021   SEC31 homolog A isoform 2 
SEC31A                0.021   SEC31 homolog A isoform 1 
FLG                   0.021   filaggrin 
NFATC1                0.021   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.021   nuclear factor of activated T-cells, cytosolic compo...
NFATC1                0.021   nuclear factor of activated T-cells, cytosolic compo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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