BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|81174549 hypothetical protein LOC84792 [Homo sapiens] (259 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|81174549 hypothetical protein LOC84792 [Homo sapiens] 535 e-152 gi|145699105 connexin40.1 [Homo sapiens] 37 0.017 gi|239750937 PREDICTED: similar to FLJ00402 protein [Homo sapiens] 33 0.19 gi|239745331 PREDICTED: similar to FLJ00402 protein [Homo sapiens] 33 0.19 gi|91105174 CD19 antigen [Homo sapiens] 33 0.25 gi|62460633 RNA-binding motif protein 16 [Homo sapiens] 33 0.32 gi|124378039 SEC16 homolog A [Homo sapiens] 32 0.55 gi|40805108 putative small membrane protein NID67 [Homo sapiens] 32 0.72 gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 31 0.94 gi|239757095 PREDICTED: similar to hCG2005276 [Homo sapiens] 31 0.94 gi|239751601 PREDICTED: hypothetical protein XP_002347933 [Homo ... 31 0.94 gi|239749957 PREDICTED: hypothetical protein [Homo sapiens] 31 0.94 gi|239746116 PREDICTED: hypothetical protein XP_002344200 [Homo ... 31 0.94 gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 30 1.6 gi|15193488 BCL2 binding component 3 isoform 4 [Homo sapiens] 30 1.6 gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 30 2.1 gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 30 2.1 gi|153791535 general control of amino acid synthesis 5-like 2 [H... 30 2.7 gi|197333755 interferon-related developmental regulator 2 [Homo ... 30 2.7 gi|164419749 SWI/SNF-related matrix-associated actin-dependent r... 29 3.6 gi|21071044 SWI/SNF-related matrix-associated actin-dependent re... 29 3.6 gi|33286436 gametogenetin [Homo sapiens] 29 3.6 gi|222352129 von Willebrand factor A domain containing 5B2 [Homo... 29 4.7 gi|28558977 mediator complex subunit 26 [Homo sapiens] 29 4.7 gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens] 29 4.7 gi|148762963 armadillo repeat containing 2 [Homo sapiens] 29 4.7 gi|49472841 A kinase (PRKA) anchor protein 8-like [Homo sapiens] 29 4.7 gi|239757119 PREDICTED: hypothetical protein [Homo sapiens] 28 6.1 gi|239752808 PREDICTED: similar to c-jun [Homo sapiens] 28 6.1 gi|239747354 PREDICTED: hypothetical protein XP_002346430 [Homo ... 28 6.1 >gi|81174549 hypothetical protein LOC84792 [Homo sapiens] Length = 259 Score = 535 bits (1377), Expect = e-152 Identities = 259/259 (100%), Positives = 259/259 (100%) Query: 1 MRDRRGPLGTCLAQVQQAGGGDSDKLSCSLKKRMPEGPWPADAPSWMNKPVVDGNSQSEA 60 MRDRRGPLGTCLAQVQQAGGGDSDKLSCSLKKRMPEGPWPADAPSWMNKPVVDGNSQSEA Sbjct: 1 MRDRRGPLGTCLAQVQQAGGGDSDKLSCSLKKRMPEGPWPADAPSWMNKPVVDGNSQSEA 60 Query: 61 LSLEMRKDPSGAGLWLHSGGPVLPYVRESVRRNPASAATPSTAVGLFPAPTECFARVSCS 120 LSLEMRKDPSGAGLWLHSGGPVLPYVRESVRRNPASAATPSTAVGLFPAPTECFARVSCS Sbjct: 61 LSLEMRKDPSGAGLWLHSGGPVLPYVRESVRRNPASAATPSTAVGLFPAPTECFARVSCS 120 Query: 121 GVEALGRRDWLGGGPRATDGHRGQCPKGEPRVSRLPRHQKVPEMGSFQDDPPSAFPKGLG 180 GVEALGRRDWLGGGPRATDGHRGQCPKGEPRVSRLPRHQKVPEMGSFQDDPPSAFPKGLG Sbjct: 121 GVEALGRRDWLGGGPRATDGHRGQCPKGEPRVSRLPRHQKVPEMGSFQDDPPSAFPKGLG 180 Query: 181 SELEPACLHSILSATLHVYPEVLLSEETKRIFLDRLKPMFSKQTIEFKKMLKSTSDGLQI 240 SELEPACLHSILSATLHVYPEVLLSEETKRIFLDRLKPMFSKQTIEFKKMLKSTSDGLQI Sbjct: 181 SELEPACLHSILSATLHVYPEVLLSEETKRIFLDRLKPMFSKQTIEFKKMLKSTSDGLQI 240 Query: 241 TLGLLALQPFELANTLCHS 259 TLGLLALQPFELANTLCHS Sbjct: 241 TLGLLALQPFELANTLCHS 259 >gi|145699105 connexin40.1 [Homo sapiens] Length = 370 Score = 37.0 bits (84), Expect = 0.017 Identities = 41/162 (25%), Positives = 58/162 (35%), Gaps = 33/162 (20%) Query: 26 LSCSLKKRMPEGPWPADAPSWMNKPVVDGNSQSEALSLEMRKDPSGAGLWLHSGGPVLPY 85 L CSL++RM P P +PS + G+++ E ++ GA P P Sbjct: 216 LVCSLRRRMRRRPGPPTSPSIRKQSGASGHAEGRRTDEEGGREEEGA--------PAPPG 267 Query: 86 VRESVRRNPASAATPSTAVGLFPAPTECFARVSCSGVEALGRRDWLGGGPRATDGHRGQC 145 R S S G P E + V+ S E LGR+ Sbjct: 268 ARAG-GEGAGSPRRTSRVSGHTKIPDEDESEVTSSASEKLGRQ----------------- 309 Query: 146 PKGEPRVSRLPRHQKVPEMGSFQDDPPSAFPKGLGSELEPAC 187 P+G P R GS ++ PSA P L + P+C Sbjct: 310 PRGRPH-----REAAQDPRGSGSEEQPSAAPSRLAA--PPSC 344 >gi|239750937 PREDICTED: similar to FLJ00402 protein [Homo sapiens] Length = 166 Score = 33.5 bits (75), Expect = 0.19 Identities = 35/118 (29%), Positives = 44/118 (37%), Gaps = 18/118 (15%) Query: 31 KKRMPEGPWPADAPSWMNKPVVDGNSQSEALSLEMRKDPSGAGLWLHSGGPVLPYVRESV 90 K+ P P D P +P V + +R PS H P+LP Sbjct: 3 KREYSSTPLPLDYPK---QPEVGEETVPGVRVSLVRTMPSRC----HCHSPILP------ 49 Query: 91 RRNPASAATPSTAVGLFPAPTECFARVSCSGVEALGRRDWLGGGPRATDGHRGQCPKG 148 NP S P + L P P + R S S + R W GPR+ D RG PKG Sbjct: 50 --NPPSL--PPSLPTLIPPPFLLWGRFSHSHSQTPAPRIW-AQGPRSRDAGRGPAPKG 102 >gi|239745331 PREDICTED: similar to FLJ00402 protein [Homo sapiens] Length = 166 Score = 33.5 bits (75), Expect = 0.19 Identities = 35/118 (29%), Positives = 44/118 (37%), Gaps = 18/118 (15%) Query: 31 KKRMPEGPWPADAPSWMNKPVVDGNSQSEALSLEMRKDPSGAGLWLHSGGPVLPYVRESV 90 K+ P P D P +P V + +R PS H P+LP Sbjct: 3 KREYSSTPLPLDYPK---QPEVGEETVPGVRVSLVRTMPSRC----HCHSPILP------ 49 Query: 91 RRNPASAATPSTAVGLFPAPTECFARVSCSGVEALGRRDWLGGGPRATDGHRGQCPKG 148 NP S P + L P P + R S S + R W GPR+ D RG PKG Sbjct: 50 --NPPSL--PPSLPTLIPPPFLLWGRFSHSHSQTPAPRIW-AQGPRSRDAGRGPAPKG 102 >gi|91105174 CD19 antigen [Homo sapiens] Length = 556 Score = 33.1 bits (74), Expect = 0.25 Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 23/92 (25%) Query: 22 DSDKLSCSLKKRMPEGP--------------WPADAPS-WMNKP--VVDGNSQSEALSLE 64 D L C LK R EGP W D P W +P + +S +++LS + Sbjct: 128 DLGGLGCGLKNRSSEGPSSPSGKLMSPKLYVWAKDRPEIWEGEPPCLPPRDSLNQSLSQD 187 Query: 65 MRKDPSGAGLWLHSGGPVLPYVRESVRRNPAS 96 + P G+ LWL G P +SV R P S Sbjct: 188 LTMAP-GSTLWLSCGVP-----PDSVSRGPLS 213 >gi|62460633 RNA-binding motif protein 16 [Homo sapiens] Length = 1271 Score = 32.7 bits (73), Expect = 0.32 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 8/71 (11%) Query: 121 GVEALGRRDWLGGGPRATDGHRGQCPKGEPRV-------SRLPRHQKVPEMGSFQDDPPS 173 G++ LGRRD G P GHRG + E RV L + G+++ DP S Sbjct: 1075 GIDHLGRRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEERGRFRSGNYRFDPRS 1134 Query: 174 A-FPKGLGSEL 183 + +G G E+ Sbjct: 1135 GPWNRGFGQEV 1145 >gi|124378039 SEC16 homolog A [Homo sapiens] Length = 2357 Score = 32.0 bits (71), Expect = 0.55 Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 16/106 (15%) Query: 77 HSGGPVLPYVRESVRRNPASAATPSTAVGLFPAPTECFARVSCSGVEALGRRDWLGGGPR 136 H G + R R+NP A P P G++ G+ + GGP+ Sbjct: 174 HPHGNMPGLDRPLSRQNPHDGVVTPAASPSLPQP----------GLQMPGQWGPVQGGPQ 223 Query: 137 ATDGHRGQCPKGEPRVSRLPRHQKVPEMGSFQDDPPSAFPKGLGSE 182 + HR CP+G P S +P VP + PS +G G E Sbjct: 224 PSGQHRSPCPEG-PVPSGVPCATSVPHFPT-----PSILHQGPGHE 263 >gi|40805108 putative small membrane protein NID67 [Homo sapiens] Length = 135 Score = 31.6 bits (70), Expect = 0.72 Identities = 38/143 (26%), Positives = 55/143 (38%), Gaps = 25/143 (17%) Query: 28 CSLKKRMPEGPW--PADAPSWMNKPVVDGNSQSEALSLEMRKDPSGAGLWLHSGGPVLPY 85 C + PE PW P+ A S++ + G + E LS R G G GGP P Sbjct: 9 CGNVEGEPETPWSLPSLAGSFLPERSPQGTLEEE-LSWSCR----GPGTGRSGGGPQQPR 63 Query: 86 VRESVRRNPASAATPSTAVGLFPAPTECFARVSCSGVEALGRRDWLGGGPRATDGHRGQC 145 + E R S A P AR S + L R + G G + C Sbjct: 64 IPEPAARPGRSCALPPPG-----------ARRSRGTFQELPRAEVPGLG--VASSCQIPC 110 Query: 146 PKGEPRVSRLPRHQKVPEMGSFQ 168 G+P +H+ +P+ G+F+ Sbjct: 111 SPGDPE-----KHRAIPDPGTFR 128 >gi|4885407 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 [Homo sapiens] Length = 1203 Score = 31.2 bits (69), Expect = 0.94 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 20/82 (24%) Query: 24 DKLSCSLKKRMPEGPWPADAPSWMNKPVVDGNSQSEALSLEMRKDPSGAGLWLHSGGPVL 83 DKL S++KR+ P A +W ++D +E R+DPS Sbjct: 2 DKLPPSMRKRLYSLPQQVGAKAW----IMDEEEDAEEEGAGGRQDPS------------- 44 Query: 84 PYVRESVRRNPASAATPSTAVG 105 R S+R P + +PS A G Sbjct: 45 ---RRSIRLRPLPSPSPSAAAG 63 >gi|239757095 PREDICTED: similar to hCG2005276 [Homo sapiens] Length = 261 Score = 31.2 bits (69), Expect = 0.94 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 22/95 (23%) Query: 46 WMNKPVVDGNSQSEALSLEMRKDPSGAGLWLHSGGPVLPYVRESVRRNPASAATPSTAVG 105 W + ++ G + +ALS+ +R GA W + P RR+P AA P G Sbjct: 79 WGSDQILAGAAPGQALSMGLRSMQVGAR-WAQANEPT--------RRSPHWAAGPGGHQG 129 Query: 106 LFPAPTECFARVSCSGVEALGRRDWLGGGPRATDG 140 L T GRR WLG PR G Sbjct: 130 LAAESTR-------------GRRLWLGTCPRQGTG 151 >gi|239751601 PREDICTED: hypothetical protein XP_002347933 [Homo sapiens] Length = 282 Score = 31.2 bits (69), Expect = 0.94 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 22/95 (23%) Query: 46 WMNKPVVDGNSQSEALSLEMRKDPSGAGLWLHSGGPVLPYVRESVRRNPASAATPSTAVG 105 W + ++ G + +ALS+ +R GA W + P RR+P AA P G Sbjct: 100 WGSDQILAGAAPGQALSMGLRSMQVGAR-WAQANEPT--------RRSPHWAAGPGGHQG 150 Query: 106 LFPAPTECFARVSCSGVEALGRRDWLGGGPRATDG 140 L T GRR WLG PR G Sbjct: 151 LAAESTR-------------GRRLWLGTCPRQGTG 172 >gi|239749957 PREDICTED: hypothetical protein [Homo sapiens] Length = 707 Score = 31.2 bits (69), Expect = 0.94 Identities = 33/106 (31%), Positives = 40/106 (37%), Gaps = 11/106 (10%) Query: 37 GPWPADAPSWMNKPVVDGNSQSEALSLEMRKDPSGAGLWLHSGGPVLPYVRESVRRNPAS 96 G P P WM P G+S SL G G W GGP+ S+R + Sbjct: 586 GGCPIFLPCWMRPP--PGSSLPPCFSL------LGPGPWALPGGPISSLGVSSLRSHHFL 637 Query: 97 AATP--STAVGLFPAPTECFARVSCSGVEALGRRDWLGGGPRATDG 140 A+TP +TA P V CS E LG + G R G Sbjct: 638 ASTPGRTTAGAHHGLPAMQVEHVHCSPQE-LGSPEGSAGSWREEQG 682 >gi|239746116 PREDICTED: hypothetical protein XP_002344200 [Homo sapiens] Length = 282 Score = 31.2 bits (69), Expect = 0.94 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 22/95 (23%) Query: 46 WMNKPVVDGNSQSEALSLEMRKDPSGAGLWLHSGGPVLPYVRESVRRNPASAATPSTAVG 105 W + ++ G + +ALS+ +R GA W + P RR+P AA P G Sbjct: 100 WGSDQILAGAAPGQALSMGLRSMQVGAR-WAQANEPT--------RRSPHWAAGPGGHQG 150 Query: 106 LFPAPTECFARVSCSGVEALGRRDWLGGGPRATDG 140 L T GRR WLG PR G Sbjct: 151 LAAESTR-------------GRRLWLGTCPRQGTG 172 >gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sapiens] Length = 288 Score = 30.4 bits (67), Expect = 1.6 Identities = 20/81 (24%), Positives = 32/81 (39%) Query: 40 PADAPSWMNKPVVDGNSQSEALSLEMRKDPSGAGLWLHSGGPVLPYVRESVRRNPASAAT 99 PA AP+ + P + + A DPS A L S +P + R PA+ Sbjct: 98 PAAAPAAVRPPAAGPPAAAPAAVCPAAADPSAASLCAASPPAAVPAAVPAAVRPPAAGPP 157 Query: 100 PSTAVGLFPAPTECFARVSCS 120 + ++PA + A C+ Sbjct: 158 AAALAAVYPAAADPSAASLCA 178 >gi|15193488 BCL2 binding component 3 isoform 4 [Homo sapiens] Length = 193 Score = 30.4 bits (67), Expect = 1.6 Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 8/93 (8%) Query: 94 PASAATPSTAVGLFPAPTECFARVSCSGVEALGRRDWLGGGPRATDGHRGQCPKG-EPRV 152 P AA P+ A L PA C + ALG W GGPR+ RG P G +P + Sbjct: 42 PGLAAAPA-APTLLPAAYLCAPTAPPAVTAALGGSRW-PGGPRSRP--RGPRPDGPQPSL 97 Query: 153 SRLPRHQKVP---EMGSFQDDPPSAFPKGLGSE 182 S +H + P G+ P A P G E Sbjct: 98 SLAEQHLESPVPSAPGALAGGPTQAAPGVRGEE 130 >gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] Length = 520 Score = 30.0 bits (66), Expect = 2.1 Identities = 32/123 (26%), Positives = 43/123 (34%), Gaps = 15/123 (12%) Query: 49 KPVVDGNSQSEALS-LEMRKDPSGAGLWLHSGGPVLPYVRESVRRNPASAATPSTAVGLF 107 +P G++Q L+ L + S A S P+ P + + A+ S A L Sbjct: 247 RPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRLAAPLAGSRAPSLS 306 Query: 108 PAPTECFARVSCS--------------GVEALGRRDWLGGGPRATDGHRGQCPKGEPRVS 153 P P C R S G E +G R GG R G R C G P + Sbjct: 307 PFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIP 366 Query: 154 RLP 156 P Sbjct: 367 AGP 369 >gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] Length = 520 Score = 30.0 bits (66), Expect = 2.1 Identities = 32/123 (26%), Positives = 43/123 (34%), Gaps = 15/123 (12%) Query: 49 KPVVDGNSQSEALS-LEMRKDPSGAGLWLHSGGPVLPYVRESVRRNPASAATPSTAVGLF 107 +P G++Q L+ L + S A S P+ P + + A+ S A L Sbjct: 247 RPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRLAAPLAGSRAPSLS 306 Query: 108 PAPTECFARVSCS--------------GVEALGRRDWLGGGPRATDGHRGQCPKGEPRVS 153 P P C R S G E +G R GG R G R C G P + Sbjct: 307 PFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCALGSPPIP 366 Query: 154 RLP 156 P Sbjct: 367 AGP 369 >gi|153791535 general control of amino acid synthesis 5-like 2 [Homo sapiens] Length = 837 Score = 29.6 bits (65), Expect = 2.7 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%) Query: 93 NPASAATPSTAVGLFPAPTECFARVSCSGVEALGRRDWLGGGPRATDG--HRGQCPKGEP 150 +PASA P+ PAP A + +G +G GG A G + + + + Sbjct: 33 SPASAPIPTPTPAPAPAPAAAPAGSTGTGGPGVGSGGAGSGGDPARPGLSQQQRASQRKA 92 Query: 151 RVSRLPRHQKVPEMGSF 167 +V LPR +K+ ++G F Sbjct: 93 QVRGLPRAKKLEKLGVF 109 >gi|197333755 interferon-related developmental regulator 2 [Homo sapiens] Length = 506 Score = 29.6 bits (65), Expect = 2.7 Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 13/85 (15%) Query: 178 GLG----SELEPACLHSILSATLHVYPEVLLSEETKRI--FLDRLKPMFSKQTIEFKKML 231 GLG S + PA LH +LSA L + +L + +I LDR P ++L Sbjct: 281 GLGGSSTSPVVPASLHGLLSAALQAWALLLTICPSTQISHILDRQLP-------RLPQLL 333 Query: 232 KSTSDGLQITLGLLALQPFELANTL 256 S S L+I G FELA L Sbjct: 334 SSESVNLRIAAGETIALLFELARDL 358 >gi|164419749 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform b [Homo sapiens] Length = 1042 Score = 29.3 bits (64), Expect = 3.6 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 10/88 (11%) Query: 149 EPRVSRLPRHQKVPEMGSFQDDPPSAFPKGLGSELEPACLHSILSATLHV-----YPEVL 203 EP++ + PR K P + FQ PP F LE L+ + V P Sbjct: 759 EPKIPKAPRPPKQPNVQDFQFFPPRLF-----ELLEKEILYYRKTIGYKVPRNPDIPNPA 813 Query: 204 LSEETKRIFLDRLKPMFSKQTIEFKKML 231 L++ ++ +D +P+ ++T E +K+L Sbjct: 814 LAQREEQKKIDGAEPLTPEETEEKEKLL 841 >gi|21071044 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin a1 isoform a [Homo sapiens] Length = 1054 Score = 29.3 bits (64), Expect = 3.6 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 10/88 (11%) Query: 149 EPRVSRLPRHQKVPEMGSFQDDPPSAFPKGLGSELEPACLHSILSATLHV-----YPEVL 203 EP++ + PR K P + FQ PP F LE L+ + V P Sbjct: 771 EPKIPKAPRPPKQPNVQDFQFFPPRLF-----ELLEKEILYYRKTIGYKVPRNPDIPNPA 825 Query: 204 LSEETKRIFLDRLKPMFSKQTIEFKKML 231 L++ ++ +D +P+ ++T E +K+L Sbjct: 826 LAQREEQKKIDGAEPLTPEETEEKEKLL 853 >gi|33286436 gametogenetin [Homo sapiens] Length = 652 Score = 29.3 bits (64), Expect = 3.6 Identities = 35/129 (27%), Positives = 48/129 (37%), Gaps = 31/129 (24%) Query: 7 PLGTCLAQVQQAGGGDSDKLSC--------SLKKRMPEGPW---PADAP--SWMNKPVVD 53 PLG Q+A GGD D C S + +P P+ P P W++ P D Sbjct: 301 PLGEVSRGAQEAEGGDGDGEGCSGPPSAPASQARALPPPPYTTFPGSKPKFDWVSAP--D 358 Query: 54 G-------NSQSEALSLEMRKDPSGAGLWLHSGGPVLP----YVRESVRRNPASAATPST 102 G N + R+ + +G W G P P + RR + P T Sbjct: 359 GPERHFRFNGAGGGIGAPRRRAAALSGPW---GSPPPPPEQIHSAPGPRRPAPALLAPPT 415 Query: 103 AVGLFPAPT 111 + FPAPT Sbjct: 416 FI--FPAPT 422 >gi|222352129 von Willebrand factor A domain containing 5B2 [Homo sapiens] Length = 1242 Score = 28.9 bits (63), Expect = 4.7 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 7/77 (9%) Query: 108 PAPTECFARVSCSGVEALGRRDWLGGGPRATDGHRGQCPKGEPRVSRLPRHQKVPEMGSF 167 PAPT +V E LGR+ A G P G R +++P + P +G+ Sbjct: 726 PAPTPAPFKVGALSTEVLGRQH-----RAALAGRSLSSPPG--RANQVPGRPRKPSLGAI 778 Query: 168 QDDPPSAFPKGLGSELE 184 D P + LG L+ Sbjct: 779 LDGPSPEPGQQLGQGLD 795 >gi|28558977 mediator complex subunit 26 [Homo sapiens] Length = 600 Score = 28.9 bits (63), Expect = 4.7 Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 13/86 (15%) Query: 94 PASAATPSTAV-GLFPAPTECFARVSCSGVEALGRRDWLGGGPRATDGHRGQCPKGEPRV 152 P +A P T+ GL P C + S ++ L R D G P PKG PR Sbjct: 222 PVNAVRPHTSSPGLGKPPGPCL-QPKASVLQQLDRVDETPGPPH---------PKGPPRC 271 Query: 153 SRLPRHQKVPEMGSFQDDPPSAFPKG 178 S PR+ + GSF PKG Sbjct: 272 SFSPRNSR--HEGSFARQQSLYAPKG 295 >gi|17149853 WAF-1/CIP1 stabilizing protein 39 [Homo sapiens] Length = 349 Score = 28.9 bits (63), Expect = 4.7 Identities = 17/53 (32%), Positives = 26/53 (49%) Query: 15 VQQAGGGDSDKLSCSLKKRMPEGPWPADAPSWMNKPVVDGNSQSEALSLEMRK 67 V QA G+ +K + LKK + P A + K V+ G +Q L+ +RK Sbjct: 294 VAQAALGNLEKATADLKKVLAIDPKNRAAQEELGKVVIQGKNQDAGLAQGLRK 346 >gi|148762963 armadillo repeat containing 2 [Homo sapiens] Length = 867 Score = 28.9 bits (63), Expect = 4.7 Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 13/114 (11%) Query: 146 PKGEPRVSRLPRHQKVPEMGSFQDDPPSAFPKGLGSELEPACLHSILSATLHVYPEVLLS 205 P R+S L KVP + ++D +FPK ++PA + + +A ++ + Sbjct: 86 PISGTRLSPLELKPKVPASPTREEDSCFSFPK---PPVDPAKIRRVSNARARLF----RA 138 Query: 206 EETKRIFLDR-LKPMFSKQTIEFKKMLKSTSDGLQITLGLLALQPFELANTLCH 258 + + DR L P SK+T+E K+ + ++I G+ + +N +CH Sbjct: 139 ASQRALLPDRSLPPSDSKKTVESKETVMMGDSMVKIN-GIYLTK----SNAICH 187 >gi|49472841 A kinase (PRKA) anchor protein 8-like [Homo sapiens] Length = 646 Score = 28.9 bits (63), Expect = 4.7 Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query: 140 GHRGQCPKGEPRVSRLPRHQKVPEMGSFQD-DPPSAFPKG 178 G RGQC G R+ L +PE G FQ AFP G Sbjct: 206 GARGQCMSGASRLPSLFSQNIIPEYGMFQGMRGGGAFPGG 245 >gi|239757119 PREDICTED: hypothetical protein [Homo sapiens] Length = 82 Score = 28.5 bits (62), Expect = 6.1 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 137 ATDGHRGQCPKGEPRVSRLPRHQKVPEMGSFQDDPPSAFPKGLGSELEPAC 187 AT H+G C G PR+ P +P+ S P + + LGS+ E C Sbjct: 2 ATLPHQGVCSYGSPRLQAPPTSATLPDTVSIGRKPTRS--QQLGSQEEMVC 50 >gi|239752808 PREDICTED: similar to c-jun [Homo sapiens] Length = 324 Score = 28.5 bits (62), Expect = 6.1 Identities = 13/26 (50%), Positives = 17/26 (65%) Query: 109 APTECFARVSCSGVEALGRRDWLGGG 134 A T+ A+ SCS V LG R+W+G G Sbjct: 236 ARTKPSAKPSCSSVTFLGHRNWVGVG 261 >gi|239747354 PREDICTED: hypothetical protein XP_002346430 [Homo sapiens] Length = 324 Score = 28.5 bits (62), Expect = 6.1 Identities = 13/26 (50%), Positives = 17/26 (65%) Query: 109 APTECFARVSCSGVEALGRRDWLGGG 134 A T+ A+ SCS V LG R+W+G G Sbjct: 236 ARTKPSAKPSCSSVTFLGHRNWVGVG 261 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.134 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,728,668 Number of Sequences: 37866 Number of extensions: 632871 Number of successful extensions: 1923 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 29 Number of HSP's that attempted gapping in prelim test: 1902 Number of HSP's gapped (non-prelim): 52 length of query: 259 length of database: 18,247,518 effective HSP length: 100 effective length of query: 159 effective length of database: 14,460,918 effective search space: 2299285962 effective search space used: 2299285962 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.