Guide to the Human Genome
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Name: LOC100293034 Sequence: fasta or formatted (324aa) NCBI GI: 239752808
Description:

PREDICTED: similar to c-jun

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         25           2
 C cysteine            2.8          9           1
 D aspartate           2.8          9           1
 E glutamate           1.5          5           1
 F phenylalanine       4.9         16           2
 G glycine            10.5         34           2
 H histidine           3.4         11           1
 I isoleucine          0.9          3           2
 K lysine              1.5          5           1
 L leucine            17.0         55           5
 M methionine          1.2          4           1
 N asparagine          1.9          6           1
 P proline             7.4         24           2
 Q glutamine           4.9         16           1
 R arginine           10.5         34           2
 S serine              9.0         29           3
 T threonine           4.0         13           1
 V valine              6.8         22           3
 W tryptophan          1.2          4           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to c-jun 
LOC100291417          1.000   PREDICTED: hypothetical protein XP_002346430 
LOC100288387          1.000   PREDICTED: hypothetical protein XP_002342128 
LOC100292064          0.016   PREDICTED: hypothetical protein XP_002345331 
LOC100290378          0.016   PREDICTED: hypothetical protein XP_002347782 
LOC100287901          0.016   PREDICTED: hypothetical protein XP_002342210 
OSGEPL1               0.013   O-sialoglycoprotein endopeptidase-like 1 
CIZ1                  0.011   CDKN1A interacting zinc finger protein 1 isoform 3 ...
CIZ1                  0.011   CDKN1A interacting zinc finger protein 1 isoform 1 ...
CIZ1                  0.011   CDKN1A interacting zinc finger protein 1 isoform 2 ...
CIZ1                  0.011   CDKN1A interacting zinc finger protein 1 isoform 1 [...
SH3RF1                0.011   SH3 domain containing ring finger 1 
FMN1                  0.010   formin 1 
NUP62                 0.010   nucleoporin 62kDa 
NUP62                 0.010   nucleoporin 62kDa 
NUP62                 0.010   nucleoporin 62kDa 
NUP62                 0.010   nucleoporin 62kDa 
ZBTB4                 0.010   zinc finger and BTB domain containing 4 
ZBTB4                 0.010   zinc finger and BTB domain containing 4 
LOC100292623          0.008   PREDICTED: hypothetical protein 
LOC100290254          0.008   PREDICTED: hypothetical protein XP_002347960 
GLIS3                 0.008   GLIS family zinc finger 3 isoform a 
GLIS3                 0.008   GLIS family zinc finger 3 isoform b 
RNF169                0.008   ring finger protein 169 
LOC100287030          0.006   PREDICTED: hypothetical protein XP_002343628 
SDC3                  0.006   syndecan 3 
ARHGEF17              0.006   Rho guanine nucleotide exchange factor (GEF) 17 [Hom...
LOC100292934          0.005   PREDICTED: hypothetical protein 
GFRA3                 0.005   GDNF family receptor alpha 3 preproprotein 
C7orf70               0.005   hypothetical protein LOC84792 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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