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Search of human proteins with 78482626
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens]
(358 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens] 724 0.0
gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens] 704 0.0
gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens] 456 e-128
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens] 456 e-128
gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens] 456 e-128
gi|19924163 muscle specific ring finger protein 1 [Homo sapiens] 426 e-119
gi|34878852 tripartite motif-containing 55 isoform 4 [Homo sapiens] 327 8e-90
gi|62865606 tripartite motif-containing 36 isoform 1 [Homo sapiens] 150 2e-36
gi|47174859 tripartite motif-containing 46 [Homo sapiens] 145 7e-35
gi|148833499 midline 1 [Homo sapiens] 131 8e-31
gi|4557753 midline 1 [Homo sapiens] 131 8e-31
gi|15451852 midline 1 [Homo sapiens] 131 8e-31
gi|223890259 midline 2 isoform 2 [Homo sapiens] 126 3e-29
gi|223890257 midline 2 isoform 1 [Homo sapiens] 126 3e-29
gi|32454739 tripartite motif-containing 3 [Homo sapiens] 105 5e-23
gi|32454737 tripartite motif-containing 3 [Homo sapiens] 105 5e-23
gi|134288906 tripartite motif-containing 67 [Homo sapiens] 97 3e-20
gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens] 95 8e-20
gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens] 95 8e-20
gi|27436877 tripartite motif-containing 59 [Homo sapiens] 95 8e-20
gi|55741632 fibronectin type III and SPRY domain containing 2 [H... 95 1e-19
gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens] 94 2e-19
gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens] 94 2e-19
gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens] 94 2e-19
gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens] 94 2e-19
gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens] 92 7e-19
gi|190341104 tripartite motif protein 9 isoform 1 [Homo sapiens] 92 7e-19
gi|5730009 ret finger protein [Homo sapiens] 83 4e-16
gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens] 82 1e-15
gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens] 82 1e-15
>gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens]
Length = 358
Score = 724 bits (1869), Expect = 0.0
Identities = 358/358 (100%), Positives = 358/358 (100%)
Query: 1 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP 60
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
Sbjct: 1 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP 60
Query: 61 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA 120
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
Sbjct: 61 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA 120
Query: 121 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM 180
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
Sbjct: 121 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM 180
Query: 181 LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQE 240
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQE
Sbjct: 181 LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQE 240
Query: 241 EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG 300
EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
Sbjct: 241 EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG 300
Query: 301 RPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVAPDGEEGSAGPEEERPDGP 358
RPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVAPDGEEGSAGPEEERPDGP
Sbjct: 301 RPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVAPDGEEGSAGPEEERPDGP 358
>gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]
Length = 400
Score = 704 bits (1816), Expect = 0.0
Identities = 358/400 (89%), Positives = 358/400 (89%), Gaps = 42/400 (10%)
Query: 1 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP 60
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
Sbjct: 1 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP 60
Query: 61 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA 120
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
Sbjct: 61 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA 120
Query: 121 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQK--------- 171
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQK
Sbjct: 121 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKKQDLTLLPR 180
Query: 172 ---------------------------------SELSDGIAMLVAGNDRVQAVITQMEEV 198
SELSDGIAMLVAGNDRVQAVITQMEEV
Sbjct: 181 LECSGTNTTYCSLDLPSSSDPPILASQNTKIIDSELSDGIAMLVAGNDRVQAVITQMEEV 240
Query: 199 CQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLE 258
CQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLE
Sbjct: 241 CQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLE 300
Query: 259 ASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPGYESMEQFTVRVEH 318
ASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPGYESMEQFTVRVEH
Sbjct: 301 ASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPGYESMEQFTVRVEH 360
Query: 319 VAEMLRTIDFQPGASGEEEEVAPDGEEGSAGPEEERPDGP 358
VAEMLRTIDFQPGASGEEEEVAPDGEEGSAGPEEERPDGP
Sbjct: 361 VAEMLRTIDFQPGASGEEEEVAPDGEEGSAGPEEERPDGP 400
>gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens]
Length = 452
Score = 456 bits (1172), Expect = e-128
Identities = 225/354 (63%), Positives = 273/354 (77%), Gaps = 5/354 (1%)
Query: 1 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP 60
M+ ++ +K + +MDNLEKQLICPICLEMF+KPVVILPCQHNLCRKCA+D+FQASNP
Sbjct: 1 MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP 60
Query: 61 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA 120
+RG TT++SGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES+RP K
Sbjct: 61 YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRP--EKK 118
Query: 121 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM 180
MCEEHEEE+INIYCL+CEVPTCSLCKVFGAHKDC+VAPL +++RQKSELSDGIA+
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI 178
Query: 181 LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQE 240
LV NDRVQ VI+Q+E+ C+TIE+ R+QKQ L ++F+ L +LEERK E+ Q + R QE
Sbjct: 179 LVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQE 238
Query: 241 EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG 300
EKL+ VR LI++Y DHLE SKLVES IQ M+EP+MA++LQ AK L+ K+ SK
Sbjct: 239 EKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQME 298
Query: 301 RPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVAPDGE---EGSAGPE 351
+ E GYE+M FTV + +++R IDF EEEE +GE EG G E
Sbjct: 299 KIEHGYENMNHFTVNLNREEKIIREIDFYREDEDEEEEEGGEGEKEGEGEVGGE 352
>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]
Length = 548
Score = 456 bits (1172), Expect = e-128
Identities = 225/354 (63%), Positives = 273/354 (77%), Gaps = 5/354 (1%)
Query: 1 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP 60
M+ ++ +K + +MDNLEKQLICPICLEMF+KPVVILPCQHNLCRKCA+D+FQASNP
Sbjct: 1 MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP 60
Query: 61 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA 120
+RG TT++SGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES+RP K
Sbjct: 61 YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRP--EKK 118
Query: 121 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM 180
MCEEHEEE+INIYCL+CEVPTCSLCKVFGAHKDC+VAPL +++RQKSELSDGIA+
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI 178
Query: 181 LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQE 240
LV NDRVQ VI+Q+E+ C+TIE+ R+QKQ L ++F+ L +LEERK E+ Q + R QE
Sbjct: 179 LVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQE 238
Query: 241 EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG 300
EKL+ VR LI++Y DHLE SKLVES IQ M+EP+MA++LQ AK L+ K+ SK
Sbjct: 239 EKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQME 298
Query: 301 RPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVAPDGE---EGSAGPE 351
+ E GYE+M FTV + +++R IDF EEEE +GE EG G E
Sbjct: 299 KIEHGYENMNHFTVNLNREEKIIREIDFYREDEDEEEEEGGEGEKEGEGEVGGE 352
>gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]
Length = 540
Score = 456 bits (1172), Expect = e-128
Identities = 225/354 (63%), Positives = 273/354 (77%), Gaps = 5/354 (1%)
Query: 1 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP 60
M+ ++ +K + +MDNLEKQLICPICLEMF+KPVVILPCQHNLCRKCA+D+FQASNP
Sbjct: 1 MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP 60
Query: 61 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA 120
+RG TT++SGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES+RP K
Sbjct: 61 YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRP--EKK 118
Query: 121 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM 180
MCEEHEEE+INIYCL+CEVPTCSLCKVFGAHKDC+VAPL +++RQKSELSDGIA+
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI 178
Query: 181 LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQE 240
LV NDRVQ VI+Q+E+ C+TIE+ R+QKQ L ++F+ L +LEERK E+ Q + R QE
Sbjct: 179 LVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYLYGILEERKNEMTQVITRTQE 238
Query: 241 EKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG 300
EKL+ VR LI++Y DHLE SKLVES IQ M+EP+MA++LQ AK L+ K+ SK
Sbjct: 239 EKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAVFLQNAKTLLKKISEASKAFQME 298
Query: 301 RPEPGYESMEQFTVRVEHVAEMLRTIDFQPGASGEEEEVAPDGE---EGSAGPE 351
+ E GYE+M FTV + +++R IDF EEEE +GE EG G E
Sbjct: 299 KIEHGYENMNHFTVNLNREEKIIREIDFYREDEDEEEEEGGEGEKEGEGEVGGE 352
>gi|19924163 muscle specific ring finger protein 1 [Homo sapiens]
Length = 353
Score = 426 bits (1096), Expect = e-119
Identities = 210/346 (60%), Positives = 272/346 (78%), Gaps = 5/346 (1%)
Query: 10 LLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTT 69
L+ D + M+NLEKQLICPICLEMF+KPVVILPCQHNLCRKCAND+FQA+NP W SRGS+
Sbjct: 7 LIQDGNPMENLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQAANPYWTSRGSSV 66
Query: 70 VSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQE-SSRPLHSKAEQHLMCEE 128
SGGRFRCP+CRHEV++DRHGVYGLQRNLLVENIIDIYKQE SSRPL + H MC+E
Sbjct: 67 SMSGGRFRCPTCRHEVIMDRHGVYGLQRNLLVENIIDIYKQECSSRPLQKGS--HPMCKE 124
Query: 129 HEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGNDRV 188
HE+EKINIYCL+CEVPTCS+CKVFG HK CEVAPL ++++ QK+EL++ I+MLVAGNDRV
Sbjct: 125 HEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQSVFQGQKTELNNCISMLVAGNDRV 184
Query: 189 QAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRG 248
Q +ITQ+E+ + ++NS + K+ L+Q+F++L A+L+E+K ELLQ + +EQE+KL +
Sbjct: 185 QTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEKKLSFIEA 244
Query: 249 LIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPGYES 308
LI+QY + L+ S+KLVE+AIQS++EP A +L AK+LI + SK G+ E G+E+
Sbjct: 245 LIQQYQEQLDKSTKLVETAIQSLDEPGGATFLLTAKQLIKSIVEASKGCQLGKTEQGFEN 304
Query: 309 MEQFTVRVEHVAEMLRTIDFQPGASGEE--EEVAPDGEEGSAGPEE 352
M+ FT+ +EH+A+ LR IDF EE EE + EE + G EE
Sbjct: 305 MDFFTLDLEHIADALRAIDFGTDEEEEEFIEEEDQEEEESTEGKEE 350
>gi|34878852 tripartite motif-containing 55 isoform 4 [Homo sapiens]
Length = 241
Score = 327 bits (839), Expect = 8e-90
Identities = 153/203 (75%), Positives = 177/203 (87%), Gaps = 2/203 (0%)
Query: 1 MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP 60
M+ ++ +K + +MDNLEKQLICPICLEMF+KPVVILPCQHNLCRKCA+D+FQASNP
Sbjct: 1 MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQHNLCRKCASDIFQASNP 60
Query: 61 LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA 120
+RG TT++SGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES+RP K
Sbjct: 61 YLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESTRP--EKK 118
Query: 121 EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM 180
MCEEHEEE+INIYCL+CEVPTCSLCKVFGAHKDC+VAPL +++RQKSELSDGIA+
Sbjct: 119 SDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAPLTHVFQRQKSELSDGIAI 178
Query: 181 LVAGNDRVQAVITQMEEVCQTIE 203
LV NDRVQ VI+Q+E+ C+TIE
Sbjct: 179 LVGSNDRVQGVISQLEDTCKTIE 201
>gi|62865606 tripartite motif-containing 36 isoform 1 [Homo sapiens]
Length = 728
Score = 150 bits (379), Expect = 2e-36
Identities = 112/427 (26%), Positives = 187/427 (43%), Gaps = 89/427 (20%)
Query: 16 SMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGR 75
++ N+E++LICP C E+F+ P+ ILPCQH++C KC ++ + + GS +
Sbjct: 23 TIKNIERELICPACKELFTHPL-ILPCQHSICHKCVKELLLTLDDSFNDVGSDNSNQSSP 81
Query: 76 -------------------------------FRCPSCRHEVVLDRHGVYGLQRNLLVENI 104
F CP C H+V L G+ GL RN +E I
Sbjct: 82 RLRLPSPSMDKIDRINRPGWKRNSLTPRTTVFPCPGCEHDVDLGERGINGLFRNFTLETI 141
Query: 105 IDIYKQ------------------ESSR------------------PLHSKAEQH----- 123
++ Y+Q ES++ P + QH
Sbjct: 142 VERYRQAARAATAIMCDLCKPPPQESTKSCMDCSASYCNECFKIHHPWGTIKAQHEYVGP 201
Query: 124 --------LMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELS 175
LMC EHE E+IN+YC C P C LCK+ G H + V + + YK K +LS
Sbjct: 202 TTNFRPKILMCPEHETERINMYCELCRRPVCHLCKLGGNHANHRVTTMSSAYKTLKEKLS 261
Query: 176 DGIAMLVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQAL 235
I L+ +V++ I+++ + + E N R K+ FE L VLEERK +L+A+
Sbjct: 262 KDIDYLIGKESQVKSQISELNLLMKETECNGERAKEEAITHFEKLFEVLEERKSSVLKAI 321
Query: 236 AREQEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSK 295
++ +L + + + +Y LE ++ LV A + ++E + ++Q AK+L ++ ++
Sbjct: 322 DSSKKLRLDKFQTQMEEYQGLLE-NNGLVGYAQEVLKETDQSCFVQTAKQLHLRIQKATE 380
Query: 296 VELAGRPEPGYESMEQFTVRVEHVAEMLRTIDF------QPGASGEEEEVAPDGEEGSAG 349
+ RP S E + V E+L + F P + E+ +V +
Sbjct: 381 SLKSFRP-AAQTSFEDYVVNTSKQTELLGELSFFSSGIDVPEINEEQSKVYNNALINWHH 439
Query: 350 PEEERPD 356
PE+++ D
Sbjct: 440 PEKDKAD 446
>gi|47174859 tripartite motif-containing 46 [Homo sapiens]
Length = 759
Score = 145 bits (365), Expect = 7e-35
Identities = 108/395 (27%), Positives = 178/395 (45%), Gaps = 98/395 (24%)
Query: 3 FTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVF------- 55
FT L+ + SM N+EK+L+CP+C EM+ +P+V LPC HN+C+ CA +V
Sbjct: 10 FTSIMDALVRISTSMKNMEKELLCPVCQEMYKQPLV-LPCTHNVCQACAREVLGQQGYIG 68
Query: 56 -----------QASNPLWQS------------RGSTTVSSG-----GR-----------F 76
AS P +S R + SG GR F
Sbjct: 69 HGGDPSSEPTSPASTPSTRSPRLSRRTLPKPDRLDRLLKSGFGTYPGRKRGALHPQVIMF 128
Query: 77 RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESS----------------------- 113
CP+C+ +V L G+ GL RNL +E +++ Y+Q S
Sbjct: 129 PCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLCKPPPLEATKGCTE 188
Query: 114 -------------RPLHSKAEQH-------------LMCEEHEEEKINIYCLSCEVPTCS 147
P ++ QH LMC +H+EE + YC +C+ C
Sbjct: 189 CRATFCNECFKLFHPWGTQKAQHEPTLPTLSFRPKGLMCPDHKEE-VTHYCKTCQRLVCQ 247
Query: 148 LCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGNDRVQAVITQMEEVCQTIEDNSR 207
LC+V H ++ P+ + Y+ K +L+ + ++ D VQ I ++EE + E + +
Sbjct: 248 LCRVRRTHSGHKITPVLSAYQALKDKLTKSLTYILGNQDTVQTQICELEEAVRHTEVSGQ 307
Query: 208 RQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLEASSKLVESA 267
+ K+ ++Q L AVLEE++ LLQA+ Q+E+L R+ I+++ L+ S LV A
Sbjct: 308 QAKEEVSQLVRGLGAVLEEKRASLLQAIEECQQERLARLSAQIQEHRSLLDGSG-LVGYA 366
Query: 268 IQSMEEPQMALYLQQAKELINKVGAMSKVELAGRP 302
+ ++E ++Q AK+L N++ ++ RP
Sbjct: 367 QEVLKETDQPCFVQAAKQLHNRIARATEALQTFRP 401
>gi|148833499 midline 1 [Homo sapiens]
Length = 667
Score = 131 bits (330), Expect = 8e-31
Identities = 94/387 (24%), Positives = 173/387 (44%), Gaps = 84/387 (21%)
Query: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRF 76
M+ LE +L CPICLE+F P+ +LPC H+LC CA+ + + +S S T F
Sbjct: 1 METLESELTCPICLELFEDPL-LLPCAHSLCFNCAHRILVSHCATNESVESITA-----F 54
Query: 77 RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES----SRPLHSKAEQHL-------- 124
+CP+CRH + L + G+ GL+RN+ ++NIID +++ S + P ++ E+
Sbjct: 55 QCPTCRHVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSA 114
Query: 125 ------MCEEHEEEKINIYCLSCEVPTC-------------------------------- 146
C++ + C++CEV C
Sbjct: 115 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLM 174
Query: 147 ---------------------SLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGN 185
+LCK+ G H+D +VA L Y + K L + L+ N
Sbjct: 175 CLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRN 234
Query: 186 DRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQR 245
++ ++ ++ + CQ +E N+ RQ+ L + + L ++++R+ + + +E K+ R
Sbjct: 235 TELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKI---KEGKVMR 291
Query: 246 VRGLIRQYGD---HLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRP 302
+R L +Q + +E S+ L+ A S++E A +LQ AK + +V + P
Sbjct: 292 LRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIP 351
Query: 303 EPGY-ESMEQFTVRVEHVAEMLRTIDF 328
E ++ + F + ++L +D+
Sbjct: 352 EINLNDTFDTFALDFSREKKLLECLDY 378
>gi|4557753 midline 1 [Homo sapiens]
Length = 667
Score = 131 bits (330), Expect = 8e-31
Identities = 94/387 (24%), Positives = 173/387 (44%), Gaps = 84/387 (21%)
Query: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRF 76
M+ LE +L CPICLE+F P+ +LPC H+LC CA+ + + +S S T F
Sbjct: 1 METLESELTCPICLELFEDPL-LLPCAHSLCFNCAHRILVSHCATNESVESITA-----F 54
Query: 77 RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES----SRPLHSKAEQHL-------- 124
+CP+CRH + L + G+ GL+RN+ ++NIID +++ S + P ++ E+
Sbjct: 55 QCPTCRHVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSA 114
Query: 125 ------MCEEHEEEKINIYCLSCEVPTC-------------------------------- 146
C++ + C++CEV C
Sbjct: 115 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLM 174
Query: 147 ---------------------SLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGN 185
+LCK+ G H+D +VA L Y + K L + L+ N
Sbjct: 175 CLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRN 234
Query: 186 DRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQR 245
++ ++ ++ + CQ +E N+ RQ+ L + + L ++++R+ + + +E K+ R
Sbjct: 235 TELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKI---KEGKVMR 291
Query: 246 VRGLIRQYGD---HLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRP 302
+R L +Q + +E S+ L+ A S++E A +LQ AK + +V + P
Sbjct: 292 LRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIP 351
Query: 303 EPGY-ESMEQFTVRVEHVAEMLRTIDF 328
E ++ + F + ++L +D+
Sbjct: 352 EINLNDTFDTFALDFSREKKLLECLDY 378
>gi|15451852 midline 1 [Homo sapiens]
Length = 667
Score = 131 bits (330), Expect = 8e-31
Identities = 94/387 (24%), Positives = 173/387 (44%), Gaps = 84/387 (21%)
Query: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRF 76
M+ LE +L CPICLE+F P+ +LPC H+LC CA+ + + +S S T F
Sbjct: 1 METLESELTCPICLELFEDPL-LLPCAHSLCFNCAHRILVSHCATNESVESITA-----F 54
Query: 77 RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES----SRPLHSKAEQHL-------- 124
+CP+CRH + L + G+ GL+RN+ ++NIID +++ S + P ++ E+
Sbjct: 55 QCPTCRHVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDANTMTSA 114
Query: 125 ------MCEEHEEEKINIYCLSCEVPTC-------------------------------- 146
C++ + C++CEV C
Sbjct: 115 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLM 174
Query: 147 ---------------------SLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGN 185
+LCK+ G H+D +VA L Y + K L + L+ N
Sbjct: 175 CLEHEDEKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRN 234
Query: 186 DRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQR 245
++ ++ ++ + CQ +E N+ RQ+ L + + L ++++R+ + + +E K+ R
Sbjct: 235 TELETLLAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKI---KEGKVMR 291
Query: 246 VRGLIRQYGD---HLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRP 302
+R L +Q + +E S+ L+ A S++E A +LQ AK + +V + P
Sbjct: 292 LRKLAQQIANCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIP 351
Query: 303 EPGY-ESMEQFTVRVEHVAEMLRTIDF 328
E ++ + F + ++L +D+
Sbjct: 352 EINLNDTFDTFALDFSREKKLLECLDY 378
>gi|223890259 midline 2 isoform 2 [Homo sapiens]
Length = 705
Score = 126 bits (317), Expect = 3e-29
Identities = 90/384 (23%), Positives = 167/384 (43%), Gaps = 78/384 (20%)
Query: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRF 76
M+ LE +L CPICLE+F P+ +LPC H+LC CA+ + +S +S T F
Sbjct: 21 METLESELTCPICLELFEDPL-LLPCAHSLCFSCAHRILVSSCSSGESIEPITA-----F 74
Query: 77 RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES----SRPLHSKAEQHL-------- 124
+CP+CR+ + L+ G+ GL+RN+ ++NIID +++ S + P S+ E+
Sbjct: 75 QCPTCRYVISLNHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSESRRERTYRPTTAMSS 134
Query: 125 ------MCEEHEEEKINIYCLSCEVPTC-------------------------------- 146
CE+ C++CEV C
Sbjct: 135 ERIACQFCEQDPPRDAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGIT 194
Query: 147 ---------------------SLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGN 185
+LCK+ G H+D +VA L +++ K L + LV N
Sbjct: 195 CLDHENEKVNMYCVSDDQLICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKRN 254
Query: 186 DRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQR 245
++ + ++ ++CQ +E N+ + L + + L ++++RK + + + KL++
Sbjct: 255 SELENQMAKLIQICQQVEVNTAMHEAKLMEECDELVEIIQQRKQMIAVKIKETKVMKLRK 314
Query: 246 VRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPG 305
+ + LE S+ L+ A ++E A +LQ AK + +V + P+
Sbjct: 315 LAQQVANCRQCLERSTVLINQAEHILKENDQARFLQSAKNIAERVAMATASSQVLIPDIN 374
Query: 306 Y-ESMEQFTVRVEHVAEMLRTIDF 328
+ ++ E F + ++L +D+
Sbjct: 375 FNDAFENFALDFSREKKLLEGLDY 398
>gi|223890257 midline 2 isoform 1 [Homo sapiens]
Length = 735
Score = 126 bits (317), Expect = 3e-29
Identities = 90/384 (23%), Positives = 167/384 (43%), Gaps = 78/384 (20%)
Query: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRF 76
M+ LE +L CPICLE+F P+ +LPC H+LC CA+ + +S +S T F
Sbjct: 21 METLESELTCPICLELFEDPL-LLPCAHSLCFSCAHRILVSSCSSGESIEPITA-----F 74
Query: 77 RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQES----SRPLHSKAEQHL-------- 124
+CP+CR+ + L+ G+ GL+RN+ ++NIID +++ S + P S+ E+
Sbjct: 75 QCPTCRYVISLNHRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSESRRERTYRPTTAMSS 134
Query: 125 ------MCEEHEEEKINIYCLSCEVPTC-------------------------------- 146
CE+ C++CEV C
Sbjct: 135 ERIACQFCEQDPPRDAVKTCITCEVSYCDRCLRATHPNKKPFTSHRLVEPVPDTHLRGIT 194
Query: 147 ---------------------SLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGN 185
+LCK+ G H+D +VA L +++ K L + LV N
Sbjct: 195 CLDHENEKVNMYCVSDDQLICALCKLVGRHRDHQVASLNDRFEKLKQTLEMNLTNLVKRN 254
Query: 186 DRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQR 245
++ + ++ ++CQ +E N+ + L + + L ++++RK + + + KL++
Sbjct: 255 SELENQMAKLIQICQQVEVNTAMHEAKLMEECDELVEIIQQRKQMIAVKIKETKVMKLRK 314
Query: 246 VRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPG 305
+ + LE S+ L+ A ++E A +LQ AK + +V + P+
Sbjct: 315 LAQQVANCRQCLERSTVLINQAEHILKENDQARFLQSAKNIAERVAMATASSQVLIPDIN 374
Query: 306 Y-ESMEQFTVRVEHVAEMLRTIDF 328
+ ++ E F + ++L +D+
Sbjct: 375 FNDAFENFALDFSREKKLLEGLDY 398
>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 105 bits (263), Expect = 5e-23
Identities = 72/287 (25%), Positives = 129/287 (44%), Gaps = 28/287 (9%)
Query: 20 LEKQ-LICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRC 78
++KQ L+C ICL+ + P V LPC H C +C + A S T+S C
Sbjct: 15 MDKQFLVCSICLDRYQCPKV-LPCLHTFCERCLQNYIPAQ--------SLTLS------C 59
Query: 79 PSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQ--------ESSRPLHSKAEQHLMCEEHE 130
P CR +L GV LQ N + ++++ +Q E PL A + L C HE
Sbjct: 60 PVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHE 119
Query: 131 EEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGNDRVQA 190
+ + YC +CE C C+ G H++ L + ++ K+ L + + ++ A
Sbjct: 120 GKTMEFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSA 178
Query: 191 VITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGEL---LQALAREQEEKLQRVR 247
I + + Q +++ ++ FE L L++RK L L+ + +++ LQ
Sbjct: 179 AIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQL 238
Query: 248 GLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMS 294
+RQ +H+ +S E A++ P++ L + +E + + A +
Sbjct: 239 DTLRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQA 285
>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 105 bits (263), Expect = 5e-23
Identities = 72/287 (25%), Positives = 129/287 (44%), Gaps = 28/287 (9%)
Query: 20 LEKQ-LICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRC 78
++KQ L+C ICL+ + P V LPC H C +C + A S T+S C
Sbjct: 15 MDKQFLVCSICLDRYQCPKV-LPCLHTFCERCLQNYIPAQ--------SLTLS------C 59
Query: 79 PSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQ--------ESSRPLHSKAEQHLMCEEHE 130
P CR +L GV LQ N + ++++ +Q E PL A + L C HE
Sbjct: 60 PVCRQTSILPEQGVSALQNNFFISSLMEAMQQAPDGAHDPEDPHPLSVVAGRPLSCPNHE 119
Query: 131 EEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGNDRVQA 190
+ + YC +CE C C+ G H++ L + ++ K+ L + + ++ A
Sbjct: 120 GKTMEFYCEACETAMCGECRA-GEHREHGTVLLRDVVEQHKAALQRQLEAVRGRLPQLSA 178
Query: 191 VITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGEL---LQALAREQEEKLQRVR 247
I + + Q +++ ++ FE L L++RK L L+ + +++ LQ
Sbjct: 179 AIALVGGISQQLQERKAEALAQISAAFEDLEQALQQRKQALVSDLETICGAKQKVLQSQL 238
Query: 248 GLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMS 294
+RQ +H+ +S E A++ P++ L + +E + + A +
Sbjct: 239 DTLRQGQEHIGSSCSFAEQALRLGSAPEVLLVRKHMRERLAALAAQA 285
>gi|134288906 tripartite motif-containing 67 [Homo sapiens]
Length = 783
Score = 96.7 bits (239), Expect = 3e-20
Identities = 58/211 (27%), Positives = 104/211 (49%)
Query: 118 SKAEQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDG 177
S A + C EHE E ++YC+SC P C LC G H EV PL ++K+ K++LS
Sbjct: 295 STARKFPTCPEHEMENYSMYCVSCRTPVCYLCLEEGRHAKHEVKPLGAMWKQHKAQLSQA 354
Query: 178 IAMLVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAR 237
+ + + + Q++ + Q I++N + L + ++L L +K +LL + +
Sbjct: 355 LNGVSDKAKEAKEFLVQLKNILQQIQENGLDYEACLVAQCDALVDALTRQKAKLLTKVTK 414
Query: 238 EQEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVE 297
E+E KL+ V I L S+ L+E ++ ++E + +LQ + LI +V +
Sbjct: 415 EREHKLKMVWDQINHCTLKLRQSTGLMEYCLEVIKENDPSGFLQISDALIKRVQVSQEQW 474
Query: 298 LAGRPEPGYESMEQFTVRVEHVAEMLRTIDF 328
+ G EP + T+ E + + + +DF
Sbjct: 475 VKGALEPKVSAEFDLTLDSEPLLQAIHQLDF 505
Score = 48.9 bits (115), Expect = 7e-06
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 12/110 (10%)
Query: 67 STTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHL-- 124
S+ SS CP C LD G+ G QRN L+E I+ Y+Q + A +
Sbjct: 148 SSLSSSSSSITCPQCHRSASLDHRGLRGFQRNRLLEAIVQRYQQGRGAVPGTSAAAAVAI 207
Query: 125 --MCEEHEEEKINIYCLSCEVPTCSLCKV--------FGAHKDCEVAPLP 164
+C+ E C C+V CS C++ F H+ + P P
Sbjct: 208 CQLCDRTPPEPAATLCEQCDVLYCSACQLKCHPSRGPFAKHRLVQPPPPP 257
Score = 44.7 bits (104), Expect = 1e-04
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 9/56 (16%)
Query: 20 LEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVF--------QASNPLWQSRGS 67
+E++L CP+C +F +P+ ILPC HN+C CA + PL SRGS
Sbjct: 1 MEEELKCPVCGSLFREPI-ILPCSHNVCLPCARTIAVQTPDGEQHLPQPLLLSRGS 55
>gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens]
Length = 744
Score = 95.1 bits (235), Expect = 8e-20
Identities = 76/288 (26%), Positives = 126/288 (43%), Gaps = 36/288 (12%)
Query: 20 LEKQ-LICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRC 78
++KQ LIC ICLE + P V LPC H C +C + A S T+S C
Sbjct: 16 IDKQFLICSICLERYKNPKV-LPCLHTFCERCLQNYIPAH--------SLTLS------C 60
Query: 79 PSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQ------ESSRPLHS----KAEQHLMCEE 128
P CR +L GV LQ N + N++D+ ++ E S L + A + L C
Sbjct: 61 PVCRQTSILPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPN 120
Query: 129 HEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGNDRV 188
H+ + YC SCE C C G H + PL + ++ K+ L L A N R+
Sbjct: 121 HDGNVMEFYCQSCETAMCREC-TEGEHAEHPTVPLKDVVEQHKASLQ---VQLDAVNKRL 176
Query: 189 QAVITQMEEVCQTIEDNSRRQKQL---LNQRFESLCAVLEERKGELLQALARE---QEEK 242
+ + ++ + + I + ++ + ++ F+ L L RK LL L + +
Sbjct: 177 PEIDSALQFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKV 236
Query: 243 LQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKV 290
LQ + Q + +++ S A+ E ++ L +Q E +N++
Sbjct: 237 LQSQLDTLLQGQESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNEL 284
>gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]
Length = 771
Score = 95.1 bits (235), Expect = 8e-20
Identities = 76/288 (26%), Positives = 126/288 (43%), Gaps = 36/288 (12%)
Query: 20 LEKQ-LICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRC 78
++KQ LIC ICLE + P V LPC H C +C + A S T+S C
Sbjct: 43 IDKQFLICSICLERYKNPKV-LPCLHTFCERCLQNYIPAH--------SLTLS------C 87
Query: 79 PSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQ------ESSRPLHS----KAEQHLMCEE 128
P CR +L GV LQ N + N++D+ ++ E S L + A + L C
Sbjct: 88 PVCRQTSILPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPN 147
Query: 129 HEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGNDRV 188
H+ + YC SCE C C G H + PL + ++ K+ L L A N R+
Sbjct: 148 HDGNVMEFYCQSCETAMCREC-TEGEHAEHPTVPLKDVVEQHKASLQ---VQLDAVNKRL 203
Query: 189 QAVITQMEEVCQTIEDNSRRQKQL---LNQRFESLCAVLEERKGELLQALARE---QEEK 242
+ + ++ + + I + ++ + ++ F+ L L RK LL L + +
Sbjct: 204 PEIDSALQFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKV 263
Query: 243 LQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKV 290
LQ + Q + +++ S A+ E ++ L +Q E +N++
Sbjct: 264 LQSQLDTLLQGQESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNEL 311
>gi|27436877 tripartite motif-containing 59 [Homo sapiens]
Length = 403
Score = 95.1 bits (235), Expect = 8e-20
Identities = 77/302 (25%), Positives = 129/302 (42%), Gaps = 34/302 (11%)
Query: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRF 76
M N E++L CPIC +F P V LPC H CR C ++ QAS + R
Sbjct: 1 MHNFEEELTCPICYSIFEDPRV-LPCSHTFCRNCLENILQASGNFYIWRPLRIP-----L 54
Query: 77 RCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLMCEEHEEEKINI 136
+CP+CR + G+ L N + II+ Y+QE + + C EH + +N+
Sbjct: 55 KCPNCRSITEIAPTGIESLPVNFALRAIIEKYQQEDHPDI-------VTCPEHYRQPLNV 107
Query: 137 YCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGN-DRVQAVITQM 195
YCL + C C G H + L + Y ++K + L + + +I ++
Sbjct: 108 YCLLDKKLVCGHCLTIGQHHGHPIDDLQSAYLKEKDTPQKLLEQLTDTHWTDLTHLIEKL 167
Query: 196 EEVCQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQ-YG 254
+E E + K+ + Q F+ L LE++K L AL V LI Q Y
Sbjct: 168 KEQKSHSEKMIQGDKEAVLQYFKELNDTLEQKKKSFLTALC--------DVGNLINQEYT 219
Query: 255 DHLEASSKLVESAIQ------SMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPGYES 308
+E ++ E ++ S++E +L++ ++ V + + RP P +
Sbjct: 220 PQIERMKEIREQQLELMALTISLQEESPLKFLEKVDDVRQHVQILKQ-----RPLPEVQP 274
Query: 309 ME 310
+E
Sbjct: 275 VE 276
>gi|55741632 fibronectin type III and SPRY domain containing 2 [Homo
sapiens]
Length = 749
Score = 94.7 bits (234), Expect = 1e-19
Identities = 61/233 (26%), Positives = 118/233 (50%), Gaps = 15/233 (6%)
Query: 110 QESSRPLHSKAEQHLMC-----EEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLP 164
+E+ R H +A + C EE EEE +++C++C+ P + KVF HK+ EV PL
Sbjct: 147 REAYRYTHGRASEEYECYVIPEEEDEEEAADVFCVTCKTPIRAFQKVFDEHKEHEVIPLN 206
Query: 165 TIYKRQKSELSDGIAMLVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFESLCAVL 224
+ K E+ + L ++ +EEV T+E+N +Q+Q + + L
Sbjct: 207 EALESAKDEIHKNMYKLEKQIIEMENFANHLEEVFITVEENFGKQEQNFESHYNEILETL 266
Query: 225 EERKGELLQALAREQEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAK 284
++ E +QAL +++EKL+ + G + G++L+ +L+E+ I+ M + +++ A
Sbjct: 267 AQKYEEKIQALGEKKKEKLEALYGQLVSCGENLDTCKELMET-IEEMCHEEKVDFIKDAV 325
Query: 285 ELINKVGAMSK----VELAGRPEPGYESMEQFTVRVEHVAEMLRTIDFQPGAS 333
+ +++G K VE++ +PE E T+ V +++ +I+ P S
Sbjct: 326 AMADRLGKFLKTKTDVEISAQPE-----FEDQTLDFSDVEQLMGSINTIPAPS 373
>gi|55953112 ret finger protein 2 isoform 2 [Homo sapiens]
Length = 410
Score = 94.0 bits (232), Expect = 2e-19
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 51/314 (16%)
Query: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQAS--NPLWQSRGSTTVSSGG 74
M+ LE+ L CPIC +F P V LPC HN C+KC + + S N LW+
Sbjct: 4 MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGSVRNSLWRP---------A 53
Query: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLMCEEHEEEKI 134
F+CP+CR E G+ LQ N ++ I++ Y + P + +C+ H + +
Sbjct: 54 PFKCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISP------KMPVCKGHLGQPL 105
Query: 135 NIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGND--RVQAVI 192
NI+CL+ C +C G H + Y +++ D L + R +
Sbjct: 106 NIFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQER----DAFESLFQSFETWRRGDAL 161
Query: 193 TQMEEVCQTIEDNSRRQKQLL-------NQRFESLCAVLEERKGELLQ-------ALARE 238
++++ T+E + R+ QLL + FE L L+++K E+L A+ +
Sbjct: 162 SRLD----TLETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQA 217
Query: 239 QEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVEL 298
+ ++ ++ ++++ + + + A + + EP ++LQQ +E K+ + + L
Sbjct: 218 YDPEINKLNTILQE-----QRMAFNIAEAFKDVSEP--IVFLQQMQEFREKIKVIKETPL 270
Query: 299 AGRPEPGYESMEQF 312
P M+ F
Sbjct: 271 PPSNLPASPLMKNF 284
>gi|47132524 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 94.0 bits (232), Expect = 2e-19
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 51/314 (16%)
Query: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQAS--NPLWQSRGSTTVSSGG 74
M+ LE+ L CPIC +F P V LPC HN C+KC + + S N LW+
Sbjct: 1 MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGSVRNSLWRP---------A 50
Query: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLMCEEHEEEKI 134
F+CP+CR E G+ LQ N ++ I++ Y + P + +C+ H + +
Sbjct: 51 PFKCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISP------KMPVCKGHLGQPL 102
Query: 135 NIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGND--RVQAVI 192
NI+CL+ C +C G H + Y +++ D L + R +
Sbjct: 103 NIFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQER----DAFESLFQSFETWRRGDAL 158
Query: 193 TQMEEVCQTIEDNSRRQKQLL-------NQRFESLCAVLEERKGELLQ-------ALARE 238
++++ T+E + R+ QLL + FE L L+++K E+L A+ +
Sbjct: 159 SRLD----TLETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQA 214
Query: 239 QEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVEL 298
+ ++ ++ ++++ + + + A + + EP ++LQQ +E K+ + + L
Sbjct: 215 YDPEINKLNTILQE-----QRMAFNIAEAFKDVSEP--IVFLQQMQEFREKIKVIKETPL 267
Query: 299 AGRPEPGYESMEQF 312
P M+ F
Sbjct: 268 PPSNLPASPLMKNF 281
>gi|16445412 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 94.0 bits (232), Expect = 2e-19
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 51/314 (16%)
Query: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQAS--NPLWQSRGSTTVSSGG 74
M+ LE+ L CPIC +F P V LPC HN C+KC + + S N LW+
Sbjct: 1 MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGSVRNSLWRP---------A 50
Query: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLMCEEHEEEKI 134
F+CP+CR E G+ LQ N ++ I++ Y + P + +C+ H + +
Sbjct: 51 PFKCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISP------KMPVCKGHLGQPL 102
Query: 135 NIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGND--RVQAVI 192
NI+CL+ C +C G H + Y +++ D L + R +
Sbjct: 103 NIFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQER----DAFESLFQSFETWRRGDAL 158
Query: 193 TQMEEVCQTIEDNSRRQKQLL-------NQRFESLCAVLEERKGELLQ-------ALARE 238
++++ T+E + R+ QLL + FE L L+++K E+L A+ +
Sbjct: 159 SRLD----TLETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQA 214
Query: 239 QEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVEL 298
+ ++ ++ ++++ + + + A + + EP ++LQQ +E K+ + + L
Sbjct: 215 YDPEINKLNTILQE-----QRMAFNIAEAFKDVSEP--IVFLQQMQEFREKIKVIKETPL 267
Query: 299 AGRPEPGYESMEQF 312
P M+ F
Sbjct: 268 PPSNLPASPLMKNF 281
>gi|47132521 ret finger protein 2 isoform 1 [Homo sapiens]
Length = 407
Score = 94.0 bits (232), Expect = 2e-19
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 51/314 (16%)
Query: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQAS--NPLWQSRGSTTVSSGG 74
M+ LE+ L CPIC +F P V LPC HN C+KC + + S N LW+
Sbjct: 1 MELLEEDLTCPICCSLFDDPRV-LPCSHNFCKKCLEGILEGSVRNSLWRP---------A 50
Query: 75 RFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLMCEEHEEEKI 134
F+CP+CR E G+ LQ N ++ I++ Y + P + +C+ H + +
Sbjct: 51 PFKCPTCRKET--SATGINSLQVNYSLKGIVEKYNKIKISP------KMPVCKGHLGQPL 102
Query: 135 NIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGND--RVQAVI 192
NI+CL+ C +C G H + Y +++ D L + R +
Sbjct: 103 NIFCLTDMQLICGICATRGEHTKHVFCSIEDAYAQER----DAFESLFQSFETWRRGDAL 158
Query: 193 TQMEEVCQTIEDNSRRQKQLL-------NQRFESLCAVLEERKGELLQ-------ALARE 238
++++ T+E + R+ QLL + FE L L+++K E+L A+ +
Sbjct: 159 SRLD----TLETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLAVMQA 214
Query: 239 QEEKLQRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVEL 298
+ ++ ++ ++++ + + + A + + EP ++LQQ +E K+ + + L
Sbjct: 215 YDPEINKLNTILQE-----QRMAFNIAEAFKDVSEP--IVFLQQMQEFREKIKVIKETPL 267
Query: 299 AGRPEPGYESMEQF 312
P M+ F
Sbjct: 268 PPSNLPASPLMKNF 281
>gi|16519559 tripartite motif protein 9 isoform 2 [Homo sapiens]
Length = 550
Score = 92.0 bits (227), Expect = 7e-19
Identities = 66/266 (24%), Positives = 112/266 (42%), Gaps = 53/266 (19%)
Query: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA------EQHLMCEE--- 128
CP C ++LD G+ G +N ++E +ID Y+Q + L + E +MCE+
Sbjct: 128 CPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDV 187
Query: 129 --------------------------------------------HEEEKINIYCLSCEVP 144
HE E ++YC+ C++P
Sbjct: 188 FYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMP 247
Query: 145 TCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGNDRVQAVITQMEEVCQTIED 204
C C G H EV L ++K KS+LS + L + + Q+ + Q I++
Sbjct: 248 VCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQE 307
Query: 205 NSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLEASSKLV 264
NS + L + ++L L RK +LL + +E E KL+ VR I L ++ L+
Sbjct: 308 NSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLM 367
Query: 265 ESAIQSMEEPQMALYLQQAKELINKV 290
E ++ ++E + +LQ + LI +V
Sbjct: 368 EYCLEVIKENDPSGFLQISDALIRRV 393
Score = 47.4 bits (111), Expect = 2e-05
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDV 54
M+ +E++L CP+C + +P+ ILPC HNLC+ CA ++
Sbjct: 1 MEEMEEELKCPVCGSFYREPI-ILPCSHNLCQACARNI 37
>gi|190341104 tripartite motif protein 9 isoform 1 [Homo sapiens]
Length = 710
Score = 92.0 bits (227), Expect = 7e-19
Identities = 66/266 (24%), Positives = 112/266 (42%), Gaps = 53/266 (19%)
Query: 78 CPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA------EQHLMCEE--- 128
CP C ++LD G+ G +N ++E +ID Y+Q + L + E +MCE+
Sbjct: 128 CPQCHRSLILDDRGLRGFPKNRVLEGVIDRYQQSKAAALKCQLCEKAPKEATVMCEQCDV 187
Query: 129 --------------------------------------------HEEEKINIYCLSCEVP 144
HE E ++YC+ C++P
Sbjct: 188 FYCDPCRLRCHPPRGPLAKHRLVPPAQGRVSRRLSPRKVSTCTDHELENHSMYCVQCKMP 247
Query: 145 TCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGNDRVQAVITQMEEVCQTIED 204
C C G H EV L ++K KS+LS + L + + Q+ + Q I++
Sbjct: 248 VCYQCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQE 307
Query: 205 NSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLEASSKLV 264
NS + L + ++L L RK +LL + +E E KL+ VR I L ++ L+
Sbjct: 308 NSVEFEACLVAQCDALIDALNRRKAQLLARVNKEHEHKLKVVRDQISHCTVKLRQTTGLM 367
Query: 265 ESAIQSMEEPQMALYLQQAKELINKV 290
E ++ ++E + +LQ + LI +V
Sbjct: 368 EYCLEVIKENDPSGFLQISDALIRRV 393
Score = 47.4 bits (111), Expect = 2e-05
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 17 MDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDV 54
M+ +E++L CP+C + +P+ ILPC HNLC+ CA ++
Sbjct: 1 MEEMEEELKCPVCGSFYREPI-ILPCSHNLCQACARNI 37
>gi|5730009 ret finger protein [Homo sapiens]
Length = 513
Score = 82.8 bits (203), Expect = 4e-16
Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 32/287 (11%)
Query: 20 LEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRCP 79
L+++ CP+CL+ F++P++ L C HN+C C + + T VS CP
Sbjct: 10 LQQETTCPVCLQYFAEPMM-LDCGHNICCACLARCWGTAE--------TNVS------CP 54
Query: 80 SCRHEVVLDRHGVYGLQRNLLVENIIDIYKQ-ESSRPLHSKAEQHLMCEEHEEEKINIYC 138
CR E RH ++ N + N+ + KQ + RP E + CE+H E + +YC
Sbjct: 55 QCR-ETFPQRH----MRPNRHLANVTQLVKQLRTERPSGPGGEMGV-CEKHREP-LKLYC 107
Query: 139 LSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGNDRVQAVITQMEEV 198
++P C +C H+ V PL + K ++ + + L D + Q E+
Sbjct: 108 EEDQMPICVVCDRSREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQA 167
Query: 199 CQTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLE 258
+ ++ +++ + FE L L+E + LL L + G I Q+ ++
Sbjct: 168 RAELLSLTQMEREKIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNIS 227
Query: 259 ASSKLVESAIQSMEEPQMALYLQQAKELINKVG-AMSKVELAGRPEP 304
S L I +EE Q Q +EL+ +G +S+ E PEP
Sbjct: 228 HLSSL----IAQLEEKQQ----QPTRELLQDIGDTLSRAERIRIPEP 266
>gi|68160933 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 81.6 bits (200), Expect = 1e-15
Identities = 76/323 (23%), Positives = 133/323 (41%), Gaps = 32/323 (9%)
Query: 20 LEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRCP 79
L+++ C ICL+ F+ PV+ C HN CR C ++ + R G F CP
Sbjct: 10 LQEEATCSICLDYFTDPVMTT-CGHNFCRACIQLSWEKARGKKGRR-----KRKGSFPCP 63
Query: 80 SCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLMCEEHEEEKINIYCL 139
CR QRNLL ++ + + + H ++ +C+EH E + ++C
Sbjct: 64 ECRE---------MSPQRNLLPNRLLTKVAEMAQQ--HPGLQKQDLCQEHHEP-LKLFCQ 111
Query: 140 SCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGNDRVQAVITQMEEVC 199
+ P C +C+ H+ V P + K +L + + L R + + E+
Sbjct: 112 KDQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSL 171
Query: 200 QTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLEA 259
+ + +++ + FE + L E + LLQAL E+EE R+R + L+
Sbjct: 172 AEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVA----CLDR 227
Query: 260 SSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPGYESMEQFTVRVEHV 319
+E + +EE LQ +++ + + V + PE + + RV
Sbjct: 228 QGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQ-CPEVAPPTRPRTVCRVPGQ 286
Query: 320 AEMLRTIDFQPGASGEEEEVAPD 342
E+LR G E+V PD
Sbjct: 287 IEVLR---------GFLEDVVPD 300
>gi|7705825 tripartite motif-containing 17 isoform 1 [Homo sapiens]
Length = 477
Score = 81.6 bits (200), Expect = 1e-15
Identities = 76/323 (23%), Positives = 133/323 (41%), Gaps = 32/323 (9%)
Query: 20 LEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRCP 79
L+++ C ICL+ F+ PV+ C HN CR C ++ + R G F CP
Sbjct: 10 LQEEATCSICLDYFTDPVMTT-CGHNFCRACIQLSWEKARGKKGRR-----KRKGSFPCP 63
Query: 80 SCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKAEQHLMCEEHEEEKINIYCL 139
CR QRNLL ++ + + + H ++ +C+EH E + ++C
Sbjct: 64 ECRE---------MSPQRNLLPNRLLTKVAEMAQQ--HPGLQKQDLCQEHHEP-LKLFCQ 111
Query: 140 SCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAMLVAGNDRVQAVITQMEEVC 199
+ P C +C+ H+ V P + K +L + + L R + + E+
Sbjct: 112 KDQSPICVVCRESREHRLHRVLPAEEAVQGYKLKLEEDMEYLREQITRTGNLQAREEQSL 171
Query: 200 QTIEDNSRRQKQLLNQRFESLCAVLEERKGELLQALAREQEEKLQRVRGLIRQYGDHLEA 259
+ + +++ + FE + L E + LLQAL E+EE R+R + L+
Sbjct: 172 AEWQGKVKERRERIVLEFEKMNLYLVEEEQRLLQALETEEEETASRLRESVA----CLDR 227
Query: 260 SSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAGRPEPGYESMEQFTVRVEHV 319
+E + +EE LQ +++ + + V + PE + + RV
Sbjct: 228 QGHSLELLLLQLEERSTQGPLQMLQDMKEPLSRKNNVSVQ-CPEVAPPTRPRTVCRVPGQ 286
Query: 320 AEMLRTIDFQPGASGEEEEVAPD 342
E+LR G E+V PD
Sbjct: 287 IEVLR---------GFLEDVVPD 300
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,603,818
Number of Sequences: 37866
Number of extensions: 671397
Number of successful extensions: 6046
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 365
Number of HSP's that attempted gapping in prelim test: 4885
Number of HSP's gapped (non-prelim): 1242
length of query: 358
length of database: 18,247,518
effective HSP length: 103
effective length of query: 255
effective length of database: 14,347,320
effective search space: 3658566600
effective search space used: 3658566600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.