Guide to the Human Genome
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Name: SORBS3 Sequence: fasta or formatted (671aa) NCBI GI: 155030230
Description:

sorbin and SH3 domain containing 3 isoform 1

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [329aa] sorbin and SH3 domain containing 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         42           3
 C cysteine            0.6          4           1
 D aspartate           5.5         37           2
 E glutamate           6.0         40           2
 F phenylalanine       3.1         21           1
 G glycine             7.7         52           3
 H histidine           2.8         19           2
 I isoleucine          3.0         20           1
 K lysine              4.2         28           2
 L leucine             6.9         46           2
 M methionine          1.0          7           1
 N asparagine          2.7         18           1
 P proline            11.3         76           2
 Q glutamine           5.5         37           2
 R arginine            9.5         64           3
 S serine              9.4         63           3
 T threonine           5.1         34           1
 V valine              4.3         29           1
 W tryptophan          2.2         15           1
 Y tyrosine            2.8         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sorbin and SH3 domain containing 3 isoform 1 
SORBS3                0.479   sorbin and SH3 domain containing 3 isoform 2 
SORBS1                0.201   sorbin and SH3 domain containing 1 isoform 5 
SORBS2                0.195   sorbin and SH3 domain containing 2 isoform 1 
SORBS1                0.188   sorbin and SH3 domain containing 1 isoform 2 
SORBS1                0.188   sorbin and SH3 domain containing 1 isoform 1 
SORBS2                0.186   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.186   sorbin and SH3 domain containing 2 isoform 3 
SORBS1                0.183   sorbin and SH3 domain containing 1 isoform 7 
SORBS1                0.183   sorbin and SH3 domain containing 1 isoform 6 
SORBS2                0.182   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.182   sorbin and SH3 domain containing 2 isoform 4 
SORBS1                0.178   sorbin and SH3 domain containing 1 isoform 4 
SORBS2                0.168   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.149   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.149   sorbin and SH3 domain containing 2 isoform 2 
SORBS1                0.125   sorbin and SH3 domain containing 1 isoform 3 
SH3RF1                0.083   SH3 domain containing ring finger 1 
SH3RF3                0.079   SH3 domain containing ring finger 3 
SH3RF2                0.062   SH3 domain containing ring finger 2 
SH3D19                0.058   SH3 domain containing 19 isoform c 
SH3D19                0.058   SH3 domain containing 19 isoform b 
SH3D19                0.054   SH3 domain containing 19 isoform a 
ITSN1                 0.043   intersectin 1 isoform ITSN-l 
SH3KBP1               0.043   SH3-domain kinase binding protein 1 isoform a 
ITSN1                 0.042   intersectin 1 isoform ITSN-s 
ITSN2                 0.042   intersectin 2 isoform 3 
ITSN2                 0.042   intersectin 2 isoform 1 
ITSN2                 0.042   intersectin 2 isoform 2 
C1orf113              0.039   SH3 domain-containing protein C1orf113 isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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