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Search of human proteins with 7706621
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens]
(284 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens] 589 e-168
gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens] 317 1e-86
gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] 308 3e-84
gi|70608170 H6 family homeobox 2 [Homo sapiens] 105 6e-23
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 91 1e-18
gi|4506049 hematopoietically expressed homeobox [Homo sapiens] 90 2e-18
gi|116805350 homeo box (H6 family) 1 [Homo sapiens] 89 3e-18
gi|14149728 BarH-like homeobox 1 [Homo sapiens] 86 5e-17
gi|157743259 H6 family homeobox 3 [Homo sapiens] 85 8e-17
gi|63054872 ladybird homeobox 1 [Homo sapiens] 82 4e-16
gi|28912912 NK6 transcription factor related, locus 2 [Homo sapi... 82 4e-16
gi|118582284 msh homeobox 1 [Homo sapiens] 82 7e-16
gi|39930383 BarH-like homeobox 2 [Homo sapiens] 82 7e-16
gi|94536800 empty spiracles homolog 1 [Homo sapiens] 82 7e-16
gi|23397672 homeobox D4 [Homo sapiens] 81 1e-15
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 81 1e-15
gi|89257348 homeo box HB9 [Homo sapiens] 81 1e-15
gi|4557673 pancreatic and duodenal homeobox 1 [Homo sapiens] 80 2e-15
gi|19923391 homeobox D3 [Homo sapiens] 80 3e-15
gi|14149611 empty spiracles homeobox 2 [Homo sapiens] 80 3e-15
gi|57528437 ladybird homeobox 2 [Homo sapiens] 79 5e-15
gi|4502365 NK3 homeobox 2 [Homo sapiens] 79 6e-15
gi|118766339 thyroid transcription factor 1 isoform 1 [Homo sapi... 78 8e-15
gi|31377777 NK2 homeobox 8 [Homo sapiens] 78 8e-15
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 78 1e-14
gi|148746211 NK2 transcription factor related, locus 3 [Homo sap... 78 1e-14
gi|4507715 thyroid transcription factor 1 isoform 2 [Homo sapiens] 77 1e-14
gi|19923352 NK3 homeobox 1 [Homo sapiens] 77 1e-14
gi|27886557 msh homeobox 2 [Homo sapiens] 77 2e-14
gi|4758090 NK2 transcription factor related, locus 5 [Homo sapiens] 77 2e-14
>gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens]
Length = 284
Score = 589 bits (1518), Expect = e-168
Identities = 284/284 (100%), Positives = 284/284 (100%)
Query: 1 MEPGMLGPHNLPHHEPISFGIDQILSGPETPGGGLGLGRGGQGHGENGAFSGGYHGASGY 60
MEPGMLGPHNLPHHEPISFGIDQILSGPETPGGGLGLGRGGQGHGENGAFSGGYHGASGY
Sbjct: 1 MEPGMLGPHNLPHHEPISFGIDQILSGPETPGGGLGLGRGGQGHGENGAFSGGYHGASGY 60
Query: 61 GPAGSLAPLPGSSGVGPGGVIRVPAHRPLPVPPPAGGAPAVPGPSGLGGAGGLAGLTFPW 120
GPAGSLAPLPGSSGVGPGGVIRVPAHRPLPVPPPAGGAPAVPGPSGLGGAGGLAGLTFPW
Sbjct: 61 GPAGSLAPLPGSSGVGPGGVIRVPAHRPLPVPPPAGGAPAVPGPSGLGGAGGLAGLTFPW 120
Query: 121 MDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQK 180
MDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQK
Sbjct: 121 MDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQK 180
Query: 181 YLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALP 240
YLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALP
Sbjct: 181 YLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALP 240
Query: 241 RPLRPPLPPDPLCLHNSSLFALQNLQPWAEDNKVASVSGLASVV 284
RPLRPPLPPDPLCLHNSSLFALQNLQPWAEDNKVASVSGLASVV
Sbjct: 241 RPLRPPLPPDPLCLHNSSLFALQNLQPWAEDNKVASVSGLASVV 284
>gi|50355978 T-cell leukemia homeobox 3 [Homo sapiens]
Length = 291
Score = 317 bits (811), Expect = 1e-86
Identities = 183/289 (63%), Positives = 201/289 (69%), Gaps = 28/289 (9%)
Query: 12 PH-HEPISFGIDQILSGPETPGGGLGLGRGGQGHGENGAFSGGYHGASGYGPAGSLAPL- 69
PH HEPISFGIDQIL+ P+ RG G G GG GA+ S A L
Sbjct: 10 PHPHEPISFGIDQILNSPDQDSAPAP--RGPDGASYLGGPPGGRPGATYPSLPASFAGLG 67
Query: 70 -----PGSSGVG----PGGVIRVPAHRPLP--VPPPAGGA----PAVPGPSGLGGAGGLA 114
GS V P GVIRVPAHRPLP VPPP A P+VP S LGG
Sbjct: 68 APFEDAGSYSVNLSLAPAGVIRVPAHRPLPGAVPPPLPSALPAMPSVPTVSSLGG----- 122
Query: 115 GLTFPWMDSGRRFAKDRLTAA--LSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLEL 172
L FPWM+S RRF KDR TAA L+PF+ TRRIGHPYQNRTPPKRKKPRTSFSR Q+ EL
Sbjct: 123 -LNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICEL 181
Query: 173 ERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLL 232
E+RF RQKYLASAERAALAK+L+MTDAQVKTWFQNRRTKWRRQTAEEREAER +A RL+L
Sbjct: 182 EKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLML 241
Query: 233 HLQQDALPRPLRPPLPPDPLCLHNSSLFALQNLQPWAED-NKVASVSGL 280
LQ DA + L + PDPLCLHNSSLFALQNLQPW ED +KV +V+ L
Sbjct: 242 QLQHDAFQKSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSL 290
>gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
Length = 330
Score = 308 bits (790), Expect = 3e-84
Identities = 182/336 (54%), Positives = 207/336 (61%), Gaps = 71/336 (21%)
Query: 6 LGPHNLP--HHEPISFGIDQILSGPETPG--------------------GGLGLGRGGQ- 42
LGPH+L H EPISFGIDQIL+ P+ G G G GG
Sbjct: 4 LGPHHLHPGHAEPISFGIDQILNSPDQGGCMGPASRLQDGEYGLGCLVGGAYTYGGGGSA 63
Query: 43 ---GHGENGAFS----GGYHGASGYGPAGSLAPLPGS--------SGVGPGG-------- 79
G G GA+ GG G +G G A S+ PL GS G GPGG
Sbjct: 64 AATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGPGGGGGSSGGA 123
Query: 80 -------VIRVPAHRPLP-----VPPPAGGAPAVPGPSGLGGAGGLAGLTFPWMDSGRRF 127
VIRVPAHRPL P A G P VP + G L GLTFPWM+S RR+
Sbjct: 124 GALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGVNNLTGLTFPWMESNRRY 183
Query: 128 AKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAER 187
KDR T GHPYQNRTPPK+KKPRTSF+R Q+ ELE+RF RQKYLASAER
Sbjct: 184 TKDRFT------------GHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAER 231
Query: 188 AALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALPRPLRPPL 247
AALAKAL+MTDAQVKTWFQNRRTKWRRQTAEEREAER +A R+LL LQQ+A + L PL
Sbjct: 232 AALAKALKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQANRILLQLQQEAFQKSLAQPL 291
Query: 248 PPDPLCLHNSSLFALQNLQPWAEDN-KVASVSGLAS 282
P DPLC+HNSSLFALQNLQPW++D+ K+ SV+ +AS
Sbjct: 292 PADPLCVHNSSLFALQNLQPWSDDSTKITSVTSVAS 327
>gi|70608170 H6 family homeobox 2 [Homo sapiens]
Length = 273
Score = 105 bits (261), Expect = 6e-23
Identities = 78/191 (40%), Positives = 102/191 (53%), Gaps = 18/191 (9%)
Query: 84 PAHRPLPVPPPAGGAPAVPGPSGLGGAGGLAGLTFPWMDSGRRFAKDRLTAALSPFSGTR 143
P H P P+P P G P G SG GG L+ D K+RL A SP G+
Sbjct: 78 PKHHP-PIPFPCLGTPKGSGGSGPGGLERTPFLSPSHSDFKEE--KERLLPAGSPSPGSE 134
Query: 144 RIGHPYQNRTP-PKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVK 202
R R +KK RT FSRSQV +LE F ++YL+S+ERA LA +L++T+ QVK
Sbjct: 135 RPRDGGAERQAGAAKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVK 194
Query: 203 TWFQNRRTKWRRQTAEEREAER--HRAGRLLLHL----QQDALPRPLRPPLP-----PDP 251
TWFQNRR KW+RQ + E EA H + + L+ + + +L LR P+P P P
Sbjct: 195 TWFQNRRNKWKRQLSAELEAANMAHASAQTLVSMPLVFRDSSL---LRVPVPRSLAFPAP 251
Query: 252 LCLHNSSLFAL 262
L S+L AL
Sbjct: 252 LYYPGSNLSAL 262
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 90.5 bits (223), Expect = 1e-18
Identities = 73/210 (34%), Positives = 96/210 (45%), Gaps = 18/210 (8%)
Query: 20 GIDQILSGPETP--GGGLGLGRGGQGHGENGAFSGGYHGASGYGPAGSLAPLPGSSGVGP 77
GI+ ILS P P G G + + S AS A + A SS G
Sbjct: 97 GINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGL 156
Query: 78 -GGVIRVPAHRPLPVPP-----PAGGAPAVPG--PSGLGGAGGLAGLTFPWMDSGRRFAK 129
G+ R + P P PP P+ A A G P L G + +P + +
Sbjct: 157 LAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLAELPGRTPIFWPGVMQSPPWRD 216
Query: 130 DRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAA 189
RL A +P G+ + KRK R +FS Q+ LE+ F + KYLA ERA
Sbjct: 217 ARL--ACTPHQGSILLDKD------GKRKHTRPTFSGQQIFALEKTFEQTKYLAGPERAR 268
Query: 190 LAKALRMTDAQVKTWFQNRRTKWRRQTAEE 219
LA +L MT++QVK WFQNRRTKWR++ A E
Sbjct: 269 LAYSLGMTESQVKVWFQNRRTKWRKKHAAE 298
>gi|4506049 hematopoietically expressed homeobox [Homo sapiens]
Length = 270
Score = 90.1 bits (222), Expect = 2e-18
Identities = 64/177 (36%), Positives = 82/177 (46%), Gaps = 22/177 (12%)
Query: 59 GYGPAGSLA----PLPGSSGVGPGGVIRVPAHRPLPVPPP-----AGGAPAVPGPSGLGG 109
G GPA P P SS R P + P P+ P A A GP G GG
Sbjct: 39 GRGPAAPTPAPTLPSPNSSFTSLVSPYRTPVYEPTPIHPAFSHHSAAALAAAYGPGGFGG 98
Query: 110 AGGLAGLTFPWMDSGRRFAKDRLTAAL--SPFSGTRRIGHPYQNRTPPKRKKPRTSFSRS 167
+P+ R D A L P G + P+ R KRK + FS
Sbjct: 99 P------LYPFP----RTVNDYTHALLRHDPL-GKPLLWSPFLQRPLHKRKGGQVRFSND 147
Query: 168 QVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAER 224
Q +ELE++F QKYL+ ER LAK L++++ QVKTWFQNRR KWRR E ++ +
Sbjct: 148 QTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQSNK 204
>gi|116805350 homeo box (H6 family) 1 [Homo sapiens]
Length = 348
Score = 89.4 bits (220), Expect = 3e-18
Identities = 82/251 (32%), Positives = 105/251 (41%), Gaps = 41/251 (16%)
Query: 36 GLGRGGQGHGEN----GAFSGGYHGASGYGP------AGSLAPLPGSSGVGPGGVIRVPA 85
G G GG+ GA G G GP G+ P + G GG+ +
Sbjct: 74 GTGPGGEARARALLGPGALGLGPRPPPGPGPPFALGCGGAARWYPRAHGGYGGGLSPDTS 133
Query: 86 HRPLP-----VPPPAGGAPAVPGPSGLGGAGGLAGLTFPWMDSGRRFAKDRLTAALSPFS 140
R P + G P PGP + P + + AA
Sbjct: 134 DRDSPETGEEMGRAEGAWPRGPGPGAVQREAAELAARGPAAGTEEASELAEVPAAAGETR 193
Query: 141 GTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQ 200
G +G ++KK RT FSRSQV +LE F ++YL+SAERA LA +L++T+ Q
Sbjct: 194 GGVGVGGG-------RKKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLAASLQLTETQ 246
Query: 201 VKTWFQNRRTKWRRQTAEERE--------AERHRAGRLLLHLQQDA---------LPRPL 243
VK WFQNRR KW+RQ A E E A+R +L H A LP PL
Sbjct: 247 VKIWFQNRRNKWKRQLAAELEAASLSPPGAQRLVRVPVLYHESPPAAAAAGPPATLPFPL 306
Query: 244 RP--PLPPDPL 252
P P PP PL
Sbjct: 307 APAAPAPPPPL 317
>gi|14149728 BarH-like homeobox 1 [Homo sapiens]
Length = 327
Score = 85.5 bits (210), Expect = 5e-17
Identities = 71/209 (33%), Positives = 93/209 (44%), Gaps = 28/209 (13%)
Query: 16 PISFGIDQILSGPETPGGGLGLGRGGQGHGENGAFSGGYHGASGYGPAGSLAPLPGSSGV 75
P S G D + +G PGG G G + G L+ S V
Sbjct: 51 PASPGRDCLETGTPRPGGASG------------------PGLDSHLQPGQLSAPAQSRTV 92
Query: 76 GPGGVIR--VPAHRPLPVPPP--AGGAPAVPGPSGLGGAGGLAGLTFPWMDSGRRFAKDR 131
+IR + +PL P + G PA P P G A SG + D
Sbjct: 93 TSSFLIRDILADCKPLAACAPYSSSGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDS 152
Query: 132 LTAALSPFSGTRRIGHPYQNRTPPKRKKPR---TSFSRSQVLELERRFLRQKYLASAERA 188
G R I ++ P + KKPR T+F+ Q+ +LER F RQKYL+ +R
Sbjct: 153 EYKVKE--EGDREISSS-RDSPPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRM 209
Query: 189 ALAKALRMTDAQVKTWFQNRRTKWRRQTA 217
LA +L +TD QVKTW+QNRRTKW+RQTA
Sbjct: 210 ELAASLNLTDTQVKTWYQNRRTKWKRQTA 238
>gi|157743259 H6 family homeobox 3 [Homo sapiens]
Length = 357
Score = 84.7 bits (208), Expect = 8e-17
Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 134 AALSPFSGTRRIGHPYQNRTPP-KRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAK 192
AA +P + + G + P ++KK RT FSRSQV +LE F ++YL+S+ERA LA
Sbjct: 203 AAATPGAEDWKKGAESPEKKPACRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAA 262
Query: 193 ALRMTDAQVKTWFQNRRTKWRRQTAEEREA 222
+L +T+ QVK WFQNRR KW+RQ A E EA
Sbjct: 263 SLHLTETQVKIWFQNRRNKWKRQLAAELEA 292
>gi|63054872 ladybird homeobox 1 [Homo sapiens]
Length = 281
Score = 82.4 bits (202), Expect = 4e-16
Identities = 52/123 (42%), Positives = 70/123 (56%), Gaps = 24/123 (19%)
Query: 150 QNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRR 209
Q +TP KR+K RT+F+ Q+ ELE+RFL QKYL+ A+R +A+ L +T+AQV TWFQNRR
Sbjct: 118 QRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRR 177
Query: 210 TKWRRQTAEEREAERHRAGRL----------LLHLQQD-------------ALPRPLRPP 246
K +R EE +A+ A +L L L+Q+ A RP P
Sbjct: 178 AKLKRD-LEEMKADVESAKKLGPSGQMDIVALAELEQNSEATAGGGGGCGRAKSRPGSPV 236
Query: 247 LPP 249
LPP
Sbjct: 237 LPP 239
>gi|28912912 NK6 transcription factor related, locus 2 [Homo
sapiens]
Length = 277
Score = 82.4 bits (202), Expect = 4e-16
Identities = 71/200 (35%), Positives = 93/200 (46%), Gaps = 34/200 (17%)
Query: 33 GGLGLGRG-GQGHGENGAFSGGYHGASGYGPAGSLAPLPG---SSGV--GPGGVIRVPAH 86
GGLG G HG + G GA+G G G L L G S+GV GP +
Sbjct: 46 GGLGAQLPLGTPHGISDIL-GRPVGAAGGGLLGGLPRLNGLASSAGVYFGPAAAVARGYP 104
Query: 87 RPLPVPPPAGGAPAVPGPSGLGGAGGLAGLTFPWMDSGRRFAKDRLTAALSPFSGTRRIG 146
+PL P G P + P + GA PW +D A +P G
Sbjct: 105 KPLAELP---GRPPIFWPGVVQGA--------PW--------RDPRLAGPAPAGGVLD-- 143
Query: 147 HPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQ 206
K+K R +FS Q+ LE+ F + KYLA ERA LA +L MT++QVK WFQ
Sbjct: 144 ------KDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQ 197
Query: 207 NRRTKWRRQTAEEREAERHR 226
NRRTKWR++ A E + + +
Sbjct: 198 NRRTKWRKRHAAEMASAKKK 217
>gi|118582284 msh homeobox 1 [Homo sapiens]
Length = 303
Score = 81.6 bits (200), Expect = 7e-16
Identities = 62/182 (34%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 62 PAGSLAPLPGSSGVGPGGVIRVPAHRPLPVPPPAGGAPAVPG---PSGLGGAGGLAGLTF 118
P + L S GV G + +PL VPP + GAP P P G GGL L
Sbjct: 73 PGAKESALAPSEGVQAAG----GSAQPLGVPPGSLGAPDAPSSPRPLGHFSVGGLLKLPE 128
Query: 119 PWMDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPPK---------RKKPRTSFSRSQV 169
+ K T P+ + R P R P +KPRT F+ +Q+
Sbjct: 129 DALVKAESPEKPERT----PWMQSPRFSPPPARRLSPPACTLRKHKTNRKPRTPFTTAQL 184
Query: 170 LELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGR 229
L LER+F +++YL+ AERA + +L +T+ QVK WFQNRR K +R E E + A
Sbjct: 185 LALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKP 244
Query: 230 LL 231
+L
Sbjct: 245 ML 246
>gi|39930383 BarH-like homeobox 2 [Homo sapiens]
Length = 387
Score = 81.6 bits (200), Expect = 7e-16
Identities = 39/62 (62%), Positives = 48/62 (77%)
Query: 156 KRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQ 215
K +K RT+FS Q+ +LER F RQKYL+ +R LA AL +TD QVKTW+QNRRTKW+RQ
Sbjct: 231 KPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQ 290
Query: 216 TA 217
TA
Sbjct: 291 TA 292
>gi|94536800 empty spiracles homolog 1 [Homo sapiens]
Length = 290
Score = 81.6 bits (200), Expect = 7e-16
Identities = 74/226 (32%), Positives = 97/226 (42%), Gaps = 43/226 (19%)
Query: 33 GGLGLGRGGQGHGEN-------------------------GAFSGGYHGASGYGPAGSLA 67
GG G G GG G G + AF G+ A+ G SL
Sbjct: 53 GGTGGGTGGGGAGSHLLAAAASEEPLRPTALNYPHPSAAEAAFVSGFPAAAAAGAGRSLY 112
Query: 68 PLPGSSGVGPGGVIRVPAHRPLPVPPPA---GGAPAVPGPSGLGGAGGLAGLTFPWMDSG 124
GP V + P PA G +P P S G +PW+
Sbjct: 113 G-------GPELVFPEAMNHPALTVHPAHQLGASPLQPPHSFFGAQHRDPLHFYPWVLRN 165
Query: 125 RRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLAS 184
R F R A+ P G G P+ K K+ RT+FS SQ+L LER F + Y+
Sbjct: 166 RFFGH-RFQASDVPQDGLLLHG-PFAR----KPKRIRTAFSPSQLLRLERAFEKNHYVVG 219
Query: 185 AERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEER--EAERHRAG 228
AER LA +L +++ QVK WFQNRRTK++RQ EE E+E+ + G
Sbjct: 220 AERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPESEQKKKG 265
>gi|23397672 homeobox D4 [Homo sapiens]
Length = 255
Score = 80.9 bits (198), Expect = 1e-15
Identities = 63/189 (33%), Positives = 86/189 (45%), Gaps = 26/189 (13%)
Query: 45 GENGA--FSGGYHGASGYGPAGSLAPLP-------GSSGVGPGGVIRVPAHRPLPVPPPA 95
GE GA + GG GA + P G L P P G SG GPG + H P P
Sbjct: 30 GEQGADYYGGGAQGAD-FQPPG-LYPRPDFGEQPFGGSGPGPGSALPARGHGQEPGGP-- 85
Query: 96 GG----------APAVPGPSGLGGAGGLAGLTFPWMDSGRRFAKDRLTAALSPFSGTRRI 145
GG AP P P+ L GA + SG + A + P+ +
Sbjct: 86 GGHYAAPGEPCPAPPAPPPAPLPGARAYSQSDPKQPPSGTALKQP---AVVYPWMKKVHV 142
Query: 146 GHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWF 205
N T + K+ RT+++R QVLELE+ F +YL R +A L +++ Q+K WF
Sbjct: 143 NSVNPNYTGGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWF 202
Query: 206 QNRRTKWRR 214
QNRR KW++
Sbjct: 203 QNRRMKWKK 211
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 80.9 bits (198), Expect = 1e-15
Identities = 54/165 (32%), Positives = 72/165 (43%), Gaps = 31/165 (18%)
Query: 56 GASGYGPAGSLAPLPGSSGVGPGGVIRVPAHRPLPVPPPAGGAPAVPGPSGLGGAGGLAG 115
G G G GS + PG + A P P +P PGP G A G AG
Sbjct: 582 GGGGLGARGSGCQGAAETDASPGATVDEAA-----APGPRENSPVAPGPPGGAAAPGGAG 636
Query: 116 LTFPWMDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPP-----KRKKPRTSFSRSQVL 170
T GT P + RT K ++ RT+F+ Q++
Sbjct: 637 TTP---------------------QGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLV 675
Query: 171 ELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQ 215
LE +F +YL+ ER LA +L +T+ QVK WFQNRRTKW++Q
Sbjct: 676 ALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 720
Score = 31.6 bits (70), Expect = 0.83
Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 16/93 (17%)
Query: 63 AGSLAPLPGSSGVGPG---GVIRVPAHRPLPVPPPAGGAPAVPGPSG--LGGAGGL-AGL 116
A + AP G G GPG G PL PP G + GP+G G GGL
Sbjct: 724 ADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLVCAA 783
Query: 117 TFPWMDSGRRFAKDRLTAALSPF-SGTRRIGHP 148
P++ S A LSPF G++ G P
Sbjct: 784 QLPFLSS---------PAVLSPFVLGSQTYGAP 807
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 80.9 bits (198), Expect = 1e-15
Identities = 67/220 (30%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 34 GLGLGRGGQGHGENGAFSGGYHGASGYGPAGSLAPLPGSSGVG--PGGV---IRVPAHRP 88
G G G GG G G G + GA+ A + A G +G PGG +PA
Sbjct: 98 GAGGGGGGTGGGHGGPHHHAHPGAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAA 157
Query: 89 LPVPPPAGGAPAVPGPSGLGGAGGLAGLTFPWMDSGR-------------RFAKD---RL 132
L P G A + L G ++P + F D R
Sbjct: 158 L-YGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHPAHPADPIKLGAGTFQLDQWLRA 216
Query: 133 TAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAK 192
+ A Q+ K ++PRT+F+ Q+LELE +F KYL+ +R +A
Sbjct: 217 STAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVAT 276
Query: 193 ALRMTDAQVKTWFQNRRTKWRR-QTAEE---REAERHRAG 228
+L +T+ QVK WFQNRR KW+R + A+E +EAE+ + G
Sbjct: 277 SLMLTETQVKIWFQNRRMKWKRSKKAKEQAAQEAEKQKGG 316
Score = 31.2 bits (69), Expect = 1.1
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 52 GGYHGASGYGPAGSLAPLPGSSGVGPGGVIRVPAHRPLPVPPPAGGAPAVPGPSGLGGAG 111
GG GASG G +GS +P P +R A P P A +P P LG G
Sbjct: 45 GGGGGASG-GTSGSCSPASSEPPAAPADRLR--AESPSPPRLLAAHCALLPKPGFLGAGG 101
Query: 112 GLAG 115
G G
Sbjct: 102 GGGG 105
>gi|4557673 pancreatic and duodenal homeobox 1 [Homo sapiens]
Length = 283
Score = 80.5 bits (197), Expect = 2e-15
Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 83 VPAHRPLPVPPPAGGAPAVPGPSGLGGAGGLAGLTFPWMDSGRRFAKDRLTAALSPFSGT 142
+PA LP PPAG P P L + L FPWM S + A ++G
Sbjct: 86 LPAQLALP-HPPAGPFPEGAEPGVLEEPNRVQ-LPFPWMKSTKAHAWK------GQWAGG 137
Query: 143 RRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVK 202
P +N K+ RT+++R+Q+LELE+ FL KY++ R LA L +T+ +K
Sbjct: 138 AYAAEPEEN------KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIK 191
Query: 203 TWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALPR------PLRPPLPP 249
WFQNRR KW+++ ++R G + +QD L PP PP
Sbjct: 192 IWFQNRRMKWKKEEDKKRGGGTAVGGGGVAEPEQDCAVTSGEELLALPPPPPP 244
>gi|19923391 homeobox D3 [Homo sapiens]
Length = 432
Score = 79.7 bits (195), Expect = 3e-15
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 13/173 (7%)
Query: 47 NGAFSGGYHGASGYGPAGSLAPLPGSSGVGPGGVIRVPAHRPLPVPPPAGGAPAVP---G 103
NG+ G S G GS P S P P P P GG PA G
Sbjct: 87 NGSCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPGGGVPAKKPKGG 146
Query: 104 PSGLGGAGGLAGLTFPWMDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPP--KRKKPR 161
P+ + ++ FPWM R+ +K + + A + G ++++PP K+ R
Sbjct: 147 PNASSSSATISKQIFPWMKESRQNSKQKNSCATA--------GESCEDKSPPGPASKRVR 198
Query: 162 TSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRR 214
T+++ +Q++ELE+ F +YL R +A L +T+ Q+K WFQNRR K+++
Sbjct: 199 TAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK 251
>gi|14149611 empty spiracles homeobox 2 [Homo sapiens]
Length = 252
Score = 79.7 bits (195), Expect = 3e-15
Identities = 56/159 (35%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 83 VPAHRPLPVPPP----AGGAPAVPGPSGLGGAGGLAGLTF-PWMDSGRRFAKDRLTAALS 137
VP H PVPPP A P+ P L + TF PW+ R+ R
Sbjct: 83 VPVH---PVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHRYRYLGHRFQG--- 136
Query: 138 PFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMT 197
+ T N K K+ RT+FS SQ+L LE F + Y+ AER LA +L +T
Sbjct: 137 --NDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLT 194
Query: 198 DAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQ 236
+ QVK WFQNRRTK++RQ EE ++ + + H+ +
Sbjct: 195 ETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINR 233
>gi|57528437 ladybird homeobox 2 [Homo sapiens]
Length = 194
Score = 79.0 bits (193), Expect = 5e-15
Identities = 63/173 (36%), Positives = 76/173 (43%), Gaps = 35/173 (20%)
Query: 92 PPPAGGAPAVPGPSGLGGAGGLAGLTFPWMDSGRRFAKDRLTAALSPFSGTRRIGHPYQN 151
PP A PA PG G R+A+ L S + P +
Sbjct: 27 PPLAASRPARPG--------------------GWRWARRDLCKTASRAENNSQACRPQRR 66
Query: 152 RTPP---------KRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVK 202
P KR+K RT+F+ QVLELERRF+ QKYLA +ER LA L + +AQV
Sbjct: 67 AGPDALGPGPFGRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVV 126
Query: 203 TWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDALPRPLRPPLPPDP-LCL 254
TWFQNRR K +R E R L L + L P PDP LCL
Sbjct: 127 TWFQNRRAKLKRDVEEMRADVAS-----LRALSPEVLCSLALPEGAPDPGLCL 174
>gi|4502365 NK3 homeobox 2 [Homo sapiens]
Length = 333
Score = 78.6 bits (192), Expect = 6e-15
Identities = 49/106 (46%), Positives = 66/106 (62%), Gaps = 9/106 (8%)
Query: 155 PKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKW-R 213
P++K+ R +FS +QV ELERRF Q+YL+ ERA LA +L++T+ QVK WFQNRR K R
Sbjct: 204 PRKKRSRAAFSHAQVFELERRFNHQRYLSGPERADLAASLKLTETQVKIWFQNRRYKTKR 263
Query: 214 RQTAEEREAERHRAGRLLLHL-----QQDALP-RPLRPP--LPPDP 251
RQ A + A A ++ + + Q+ LP LRPP LP P
Sbjct: 264 RQMAADLLASAPAAKKVAVKVLVRDDQRQYLPGEVLRPPSLLPLQP 309
>gi|118766339 thyroid transcription factor 1 isoform 1 [Homo
sapiens]
Length = 401
Score = 78.2 bits (191), Expect = 8e-15
Identities = 82/257 (31%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 3 PGMLGPHNLPHHEP---ISFGIDQILSGPETP-------GGGLGLG----RGGQGHGENG 48
PG L + P F + ILS E GGGLG R GQ
Sbjct: 22 PGRLSRRRIMSMSPKHTTPFSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQGQAAPPTA 81
Query: 49 AFSG---GYHGASGYGPAGSLAPLPGSSGVGPGGVIRVPAHRPLPVPPPAGGAPAVPGPS 105
A G+HGA + A +P S GG +PP S
Sbjct: 82 AMQQHAVGHHGAVTAAYHMTAAGVPQLSHSAVGGYCNGNLGNMSELPPYQDTMRN--SAS 139
Query: 106 GLGGAGGLAGLTFPWMDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTP----PKRKKPR 161
G G G FP + RF +S G +G +N P P+RK+ R
Sbjct: 140 GPGWYGANPDPRFPAIS---RFMGPASGMNMSGMGGLGSLGDVSKNMAPLPSAPRRKR-R 195
Query: 162 TSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEERE 221
FS++QV ELERRF +QKYL++ ER LA + +T QVK WFQN R K +RQ A+++
Sbjct: 196 VLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ-AKDKA 254
Query: 222 AERHRAGRLLLHLQQDA 238
A++ LQQD+
Sbjct: 255 AQQ--------QLQQDS 263
>gi|31377777 NK2 homeobox 8 [Homo sapiens]
Length = 239
Score = 78.2 bits (191), Expect = 8e-15
Identities = 54/138 (39%), Positives = 68/138 (49%), Gaps = 10/138 (7%)
Query: 120 WMDSGRRF--AKDRLTAALSPFSGTRRIGHPYQNRTPP-----KRKKPRTSFSRSQVLEL 172
W+DS R + D + SP ++R P P KRKK R FS++Q LEL
Sbjct: 43 WLDSERGHYPSSDESSLETSPPDSSQR---PSARPASPGSDAEKRKKRRVLFSKAQTLEL 99
Query: 173 ERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLL 232
ERRF +Q+YL++ ER LA LR+T QVK WFQN R K +R A A L
Sbjct: 100 ERRFRQQRYLSAPEREQLASLLRLTPTQVKIWFQNHRYKLKRARAPGAAESPDLAASAEL 159
Query: 233 HLQQDALPRPLRPPLPPD 250
H L R + P L D
Sbjct: 160 HAAPGLLRRVVVPVLVRD 177
>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
Length = 411
Score = 77.8 bits (190), Expect = 1e-14
Identities = 53/165 (32%), Positives = 71/165 (43%), Gaps = 31/165 (18%)
Query: 56 GASGYGPAGSLAPLPGSSGVGPGGVIRVPAHRPLPVPPPAGGAPAVPGPSGLGGAGGLAG 115
G G G GS + PG + A P P +P GP G A G AG
Sbjct: 179 GGGGLGARGSGCQGAAETDASPGATVDEAA-----APGPRENSPVAQGPPGGAAAPGGAG 233
Query: 116 LTFPWMDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPP-----KRKKPRTSFSRSQVL 170
T GT P + RT K ++ RT+F+ Q++
Sbjct: 234 TTP---------------------QGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLV 272
Query: 171 ELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQ 215
LE +F +YL+ ER LA +L +T+ QVK WFQNRRTKW++Q
Sbjct: 273 ALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 317
Score = 31.6 bits (70), Expect = 0.83
Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 16/93 (17%)
Query: 63 AGSLAPLPGSSGVGPG---GVIRVPAHRPLPVPPPAGGAPAVPGPSG--LGGAGGL-AGL 116
A + AP G G GPG G PL PP G + GP+G G GGL
Sbjct: 321 ADTSAPTGGGGGPGPGAGPGTGLPGGLSPLSPSPPMGAPLGMHGPAGYPAHGPGGLVCAA 380
Query: 117 TFPWMDSGRRFAKDRLTAALSPF-SGTRRIGHP 148
P++ S A LSPF G++ G P
Sbjct: 381 QLPFLSS---------PAVLSPFVLGSQTYGAP 404
>gi|148746211 NK2 transcription factor related, locus 3 [Homo
sapiens]
Length = 364
Score = 77.8 bits (190), Expect = 1e-14
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 154 PPKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWR 213
P R+KPR FS++QV ELERRF +Q+YL++ ER LA +L++T QVK WFQNRR K +
Sbjct: 145 PRSRRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCK 204
Query: 214 RQTAEE 219
RQ ++
Sbjct: 205 RQRQDK 210
>gi|4507715 thyroid transcription factor 1 isoform 2 [Homo sapiens]
Length = 371
Score = 77.4 bits (189), Expect = 1e-14
Identities = 78/238 (32%), Positives = 103/238 (43%), Gaps = 33/238 (13%)
Query: 19 FGIDQILSGPETP-------GGGLGLG----RGGQGHGENGAFSG---GYHGASGYGPAG 64
F + ILS E GGGLG R GQ A G+HGA
Sbjct: 11 FSVSDILSPLEESYKKVGMEGGGLGAPLAAYRQGQAAPPTAAMQQHAVGHHGAVTAAYHM 70
Query: 65 SLAPLPGSSGVGPGGVIRVPAHRPLPVPPPAGGAPAVPGPSGLGGAGGLAGLTFPWMDSG 124
+ A +P S GG +PP SG G G FP +
Sbjct: 71 TAAGVPQLSHSAVGGYCNGNLGNMSELPPYQDTMRN--SASGPGWYGANPDPRFPAIS-- 126
Query: 125 RRFAKDRLTAALSPFSGTRRIGHPYQNRTP----PKRKKPRTSFSRSQVLELERRFLRQK 180
RF +S G +G +N P P+RK+ R FS++QV ELERRF +QK
Sbjct: 127 -RFMGPASGMNMSGMGGLGSLGDVSKNMAPLPSAPRRKR-RVLFSQAQVYELERRFKQQK 184
Query: 181 YLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLLHLQQDA 238
YL++ ER LA + +T QVK WFQN R K +RQ A+++ A++ LQQD+
Sbjct: 185 YLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQ-AKDKAAQQ--------QLQQDS 233
>gi|19923352 NK3 homeobox 1 [Homo sapiens]
Length = 234
Score = 77.4 bits (189), Expect = 1e-14
Identities = 44/97 (45%), Positives = 67/97 (69%), Gaps = 6/97 (6%)
Query: 148 PYQNRTPPK-RKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQ 206
P +TP + +K+ R +FS +QV+ELER+F QKYL++ ERA LAK L++T+ QVK WFQ
Sbjct: 114 PRLPQTPKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQ 173
Query: 207 NRRTKWRRQ--TAEEREAERHRAGRLLLHLQQDALPR 241
NRR K +R+ ++E + E+H + L L+++A R
Sbjct: 174 NRRYKTKRKQLSSELGDLEKHSS---LPALKEEAFSR 207
>gi|27886557 msh homeobox 2 [Homo sapiens]
Length = 267
Score = 76.6 bits (187), Expect = 2e-14
Identities = 63/195 (32%), Positives = 92/195 (47%), Gaps = 31/195 (15%)
Query: 62 PAGSLAPLPGSSGVGPGGVIRV---------PAHRPLPVPPPAGGAPAVPGPSGLGGAGG 112
P +PLP S G +R AH P P+ P A S G A
Sbjct: 58 PPKEASPLPAESA-SAGATLRPLLLSGHGAREAHSPGPLVKPFETASVKSENSEDGAA-- 114
Query: 113 LAGLTFPWMDSGRRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKPRTSFSRSQVLEL 172
WM R++ +SP + T R +++T +KPRT F+ SQ+L L
Sbjct: 115 -------WMQEPGRYSPP--PRHMSPTTCTLR-----KHKT---NRKPRTPFTTSQLLAL 157
Query: 173 ERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHRAGRLLL 232
ER+F +++YL+ AERA + +L +T+ QVK WFQNRR K +R +E E E+ + +
Sbjct: 158 ERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKR--LQEAELEKLKMAAKPM 215
Query: 233 HLQQDALPRPLRPPL 247
+LP P+ PL
Sbjct: 216 LPSSFSLPFPISSPL 230
>gi|4758090 NK2 transcription factor related, locus 5 [Homo sapiens]
Length = 324
Score = 76.6 bits (187), Expect = 2e-14
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 13/91 (14%)
Query: 156 KRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQ 215
+R+KPR FS++QV ELERRF +Q+YL++ ER LA L++T QVK WFQNRR K +RQ
Sbjct: 137 RRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQ 196
Query: 216 TAEEREAERHRAGRLLLHLQQDALPRPLRPP 246
++ L+ LP P PP
Sbjct: 197 RQDQT-------------LELVGLPPPPPPP 214
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.138 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,000,310
Number of Sequences: 37866
Number of extensions: 1007655
Number of successful extensions: 17855
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 611
Number of HSP's that attempted gapping in prelim test: 7652
Number of HSP's gapped (non-prelim): 5974
length of query: 284
length of database: 18,247,518
effective HSP length: 101
effective length of query: 183
effective length of database: 14,423,052
effective search space: 2639418516
effective search space used: 2639418516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.