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Search of human proteins with 7705877
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7705877 hematological and neurological expressed 1 isoform 1
[Homo sapiens]
(154 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7705877 hematological and neurological expressed 1 isoform 1 ... 312 6e-86
gi|50345292 hematological and neurological expressed 1 isoform 3... 218 1e-57
gi|50345294 hematological and neurological expressed 1 isoform 2... 200 4e-52
gi|21700763 hematological and neurological expressed 1-like [Hom... 52 3e-07
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 41 4e-04
gi|55741677 SET domain containing 1A [Homo sapiens] 37 0.007
gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo s... 37 0.009
gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo s... 37 0.009
gi|191252785 centrobin, centrosomal BRCA2 interacting protein is... 37 0.009
gi|160707881 formin 2 [Homo sapiens] 35 0.019
gi|209977080 REST corepressor 3 isoform a [Homo sapiens] 35 0.033
gi|8922733 REST corepressor 3 isoform d [Homo sapiens] 35 0.033
gi|190358526 hypothetical protein LOC54785 [Homo sapiens] 35 0.033
gi|124430752 kinesin family member 26B [Homo sapiens] 35 0.033
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 34 0.043
gi|148806902 TBC1 domain family, member 12 [Homo sapiens] 34 0.043
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 34 0.043
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 34 0.043
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 34 0.057
gi|32698752 hypothetical protein LOC63939 [Homo sapiens] 34 0.057
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 33 0.074
gi|74048537 praja 1 isoform b [Homo sapiens] 33 0.074
gi|41281725 praja 1 isoform a [Homo sapiens] 33 0.074
gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] 33 0.074
gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a... 33 0.097
gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b... 33 0.097
gi|154354972 phosphatase and actin regulator 2 isoform 4 [Homo s... 33 0.097
gi|154354970 phosphatase and actin regulator 2 isoform 2 [Homo s... 33 0.097
gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens] 33 0.097
gi|5729790 CCCTC-binding factor [Homo sapiens] 33 0.13
>gi|7705877 hematological and neurological expressed 1 isoform 1
[Homo sapiens]
Length = 154
Score = 312 bits (800), Expect = 6e-86
Identities = 154/154 (100%), Positives = 154/154 (100%)
Query: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQA 60
MTTTTTFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQA
Sbjct: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQA 60
Query: 61 SWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKGEGDIHENVDTDLPGSLGQSE 120
SWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKGEGDIHENVDTDLPGSLGQSE
Sbjct: 61 SWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKGEGDIHENVDTDLPGSLGQSE 120
Query: 121 EKPVPAAPVPSPVAPAPVPSRRNPPGGKSSLVLG 154
EKPVPAAPVPSPVAPAPVPSRRNPPGGKSSLVLG
Sbjct: 121 EKPVPAAPVPSPVAPAPVPSRRNPPGGKSSLVLG 154
>gi|50345292 hematological and neurological expressed 1 isoform 3
[Homo sapiens]
Length = 108
Score = 218 bits (556), Expect = 1e-57
Identities = 108/108 (100%), Positives = 108/108 (100%)
Query: 47 MASNIFGTPEENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKGEGDIHE 106
MASNIFGTPEENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKGEGDIHE
Sbjct: 1 MASNIFGTPEENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKGEGDIHE 60
Query: 107 NVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSRRNPPGGKSSLVLG 154
NVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSRRNPPGGKSSLVLG
Sbjct: 61 NVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSRRNPPGGKSSLVLG 108
>gi|50345294 hematological and neurological expressed 1 isoform 2
[Homo sapiens]
Length = 181
Score = 200 bits (509), Expect = 4e-52
Identities = 99/99 (100%), Positives = 99/99 (100%)
Query: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQA 60
MTTTTTFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQA
Sbjct: 1 MTTTTTFKGVDPNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQA 60
Query: 61 SWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLK 99
SWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLK
Sbjct: 61 SWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLK 99
>gi|21700763 hematological and neurological expressed 1-like [Homo
sapiens]
Length = 190
Score = 51.6 bits (122), Expect = 3e-07
Identities = 55/182 (30%), Positives = 71/182 (39%), Gaps = 50/182 (27%)
Query: 15 RNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEE--NQASWAKSAGAKSSG 72
R SR ++PPGG S+ G E R N+MASNIFG EE N G K SG
Sbjct: 11 RAGSRAMKPPGGESSNLFGSPEEATPSSRPNRMASNIFGPTEEPQNIPKRTNPPGGKGSG 70
Query: 73 GREDLESSGLQRRNSSEASSGDFLDLKG----------------------EGDIHENVDT 110
+ ES+ +Q R G D+ G EG E +
Sbjct: 71 IFD--ESTPVQTRQHLNPPGGKTSDIFGSPVTATSRLAHPNKPKDHVFLCEG---EEPKS 125
Query: 111 DL-----------PGSLGQS-------EEKPVPAAPVPSP-VAPAPVPSRR--NPPGGKS 149
DL PG G + E++P+P P + P P + NPPGGKS
Sbjct: 126 DLKAARSIPAGAEPGEKGSARKAGPAKEQEPMPTVDSHEPRLGPRPRSHNKVLNPPGGKS 185
Query: 150 SL 151
S+
Sbjct: 186 SI 187
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 41.2 bits (95), Expect = 4e-04
Identities = 38/134 (28%), Positives = 54/134 (40%), Gaps = 21/134 (15%)
Query: 32 LGFDEPTEQPVRKNKMASNIFGTPEENQASWAKSAGAKSSGGREDLESSGLQRRNSSEAS 91
LGF P E + K+ +I EE + + A +GG ED E L R S
Sbjct: 1922 LGFSSPYEGVLNKSPKTRDI--QEEELEVLLEEEA----AGGDEDREKEILIERIQSIKE 1975
Query: 92 SGDFL-----DLKGEGDIHENVDTDLPGSL----------GQSEEKPVPAAPVPSPVAPA 136
+ + +L G EN+D++ S G SE P PA P P P+
Sbjct: 1976 EKEDITYRLPELDPRGSDEENLDSETSASTESLLEERAGRGASEGPPAPALPCPGAPTPS 2035
Query: 137 PVPSRRNPPGGKSS 150
P+P+ PP + S
Sbjct: 2036 PLPTVAAPPRRRPS 2049
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 37.0 bits (84), Expect = 0.007
Identities = 32/114 (28%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
Query: 35 DEPTEQPVRKNKMASNIF-GTPEENQAS-----WAKSAGAKSSGGREDLESSGLQRRNSS 88
DE E+ V K + + G EE+ +S +A S G S + SS +SS
Sbjct: 987 DEDREEAVDTTKKETEVSDGEDEESDSSSKCSLYADSDGENDSTSDSESSSSSSSSSSSS 1046
Query: 89 EASSGDFLDLKGEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPV-APAPVPSR 141
+SS E + + + P +L S P PVP+P PVP R
Sbjct: 1047 SSSSSSSSSSSSESSSEDEEEEERPAAL-PSASPPPREVPVPTPAPVEVPVPER 1099
Score = 28.9 bits (63), Expect = 1.8
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 19/92 (20%)
Query: 63 AKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKGEGDIHENVDTDLPGSLGQSEEK 122
A + + RE +++G + +S SSGD +++ D D GS
Sbjct: 552 APTGSGEPGATRESPKANG--QNQASPCSSGDDMEIS---------DDDRGGS------- 593
Query: 123 PVPAAPVPSPVAPAPVPSRRNPPGGKSSLVLG 154
P AP P P P P PP +SL LG
Sbjct: 594 -PPPAPTPPQQPPPPPPPPPPPPPYLASLPLG 624
>gi|154354974 phosphatase and actin regulator 2 isoform 3 [Homo
sapiens]
Length = 634
Score = 36.6 bits (83), Expect = 0.009
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 19/139 (13%)
Query: 12 PNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQASWAKSAGAK-S 70
P SRN++R GS+ S + T + S+ P+ ++ + + AG +
Sbjct: 211 PASRNTTR----EAAGSSHS---KKTTGSKASASPSTSSTSSRPKASKETVSSKAGTVGT 263
Query: 71 SGGREDLESSGLQRRNSSEASSGDFLDLKGEGDIHE----NVDTDLPGSLGQSEEK---- 122
+ G+ + + SS+ ++ DLKGE ++ +PG+ Q+ K
Sbjct: 264 TKGKRKTDKQPITSHLSSDTTTSGTSDLKGEPAETRVESFKLEQTVPGAEEQNTGKFKSM 323
Query: 123 --PVPAAPVPSPVAPAPVP 139
P P AP PSP+AP P+P
Sbjct: 324 VPPPPVAPAPSPLAP-PLP 341
>gi|154354968 phosphatase and actin regulator 2 isoform 1 [Homo
sapiens]
Length = 645
Score = 36.6 bits (83), Expect = 0.009
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 19/139 (13%)
Query: 12 PNSRNSSRVLRPPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQASWAKSAGAK-S 70
P SRN++R GS+ S + T + S+ P+ ++ + + AG +
Sbjct: 222 PASRNTTR----EAAGSSHS---KKTTGSKASASPSTSSTSSRPKASKETVSSKAGTVGT 274
Query: 71 SGGREDLESSGLQRRNSSEASSGDFLDLKGEGDIHE----NVDTDLPGSLGQSEEK---- 122
+ G+ + + SS+ ++ DLKGE ++ +PG+ Q+ K
Sbjct: 275 TKGKRKTDKQPITSHLSSDTTTSGTSDLKGEPAETRVESFKLEQTVPGAEEQNTGKFKSM 334
Query: 123 --PVPAAPVPSPVAPAPVP 139
P P AP PSP+AP P+P
Sbjct: 335 VPPPPVAPAPSPLAP-PLP 352
>gi|191252785 centrobin, centrosomal BRCA2 interacting protein
isoform alpha [Homo sapiens]
Length = 903
Score = 36.6 bits (83), Expect = 0.009
Identities = 51/173 (29%), Positives = 68/173 (39%), Gaps = 37/173 (21%)
Query: 10 VDPNSRNSSRVLRPPGGGSNFSLGFDEPTE-----QPVRKNK----MASNIFGTPE---- 56
V N+ N S L PP G ++E + PV K K MAS++F PE
Sbjct: 720 VPQNNENPSVDLLPPKSGPLTVPSWEEAPQVPRIPPPVHKTKVPLAMASSLFRVPEPPSS 779
Query: 57 ENQASWAKSAGAKSSGG------REDLESSGL----QRRNSSEASSGDFL---------D 97
+Q S S+G+ GG R+ +E S L Q R + D L
Sbjct: 780 HSQGS-GPSSGSPERGGDGLTFPRQLMEVSQLLRLYQARGWGALPAEDLLLYLKRLEHSG 838
Query: 98 LKGEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSRRNPPGGKSS 150
G GD +TD LG+ K +P+ VP +A A P PP K S
Sbjct: 839 TDGRGDNVPRRNTD--SRLGEIPRKEIPSQAVPRRLATA--PKTEKPPARKKS 887
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 35.4 bits (80), Expect = 0.019
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 11/122 (9%)
Query: 23 PPGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQASWAKSAGAKSSGGREDLESSGL 82
P GG S P QP K+ +S F PE A A + +G ++ E
Sbjct: 294 PSPGGLPVSEAPSLPAAQPAAKDSPSSTAFPFPEAGPGEEAAGAPVRGAGDTDE-EGEED 352
Query: 83 QRRNSSEASSGDFLDLKGEGDIHENVDTDLPGSLGQ--SEEKPVPAAPVPSPVAPAPVPS 140
++ S G+ + V D P LG+ EE P AP + + +P PS
Sbjct: 353 AFEDAPRGSPGE--------EWAPEVGEDAPQRLGEEPEEEAQGPDAPAAASLPGSPAPS 404
Query: 141 RR 142
+R
Sbjct: 405 QR 406
>gi|209977080 REST corepressor 3 isoform a [Homo sapiens]
Length = 553
Score = 34.7 bits (78), Expect = 0.033
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 12/90 (13%)
Query: 56 EENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKGEGDIHENVDTDLPGS 115
EE W G ++S G D + G + +++S SG D + E + P +
Sbjct: 396 EEVLQEWEAEQGTQASNG--DASTLGEETKSASNVPSGKSTDEEEEAQTPQ-----APRT 448
Query: 116 LGQSEEKPVPAAPVPSPVAPAPVPSRRNPP 145
LG P P AP +P AP+ + PP
Sbjct: 449 LG-----PSPPAPSSTPTPTAPIATLNQPP 473
>gi|8922733 REST corepressor 3 isoform d [Homo sapiens]
Length = 495
Score = 34.7 bits (78), Expect = 0.033
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 12/90 (13%)
Query: 56 EENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLDLKGEGDIHENVDTDLPGS 115
EE W G ++S G D + G + +++S SG D + E + P +
Sbjct: 338 EEVLQEWEAEQGTQASNG--DASTLGEETKSASNVPSGKSTDEEEEAQTPQ-----APRT 390
Query: 116 LGQSEEKPVPAAPVPSPVAPAPVPSRRNPP 145
LG P P AP +P AP+ + PP
Sbjct: 391 LG-----PSPPAPSSTPTPTAPIATLNQPP 415
>gi|190358526 hypothetical protein LOC54785 [Homo sapiens]
Length = 357
Score = 34.7 bits (78), Expect = 0.033
Identities = 36/131 (27%), Positives = 51/131 (38%), Gaps = 15/131 (11%)
Query: 24 PGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQASW----AKSAGAKSSGGREDLES 79
PGGG + +E ++ A F + ++ S GA SSG E
Sbjct: 131 PGGGMDVEQQEEEDNDEEAAAGSRAGRSFSSRLQDSRSLDGLSEACGGAGSSGSAESGAG 190
Query: 80 SGLQRRNSSEASSGDFLDLKG----EGDIHENVDTDLPGSLGQS-EEKPVPAAPVPSPVA 134
G + SS L+L+G GD+ V +L + S P P+AP A
Sbjct: 191 GGRRATISSP------LELEGTVSRHGDLTHFVANNLQLKIRLSGAPPPPPSAPARPCPA 244
Query: 135 PAPVPSRRNPP 145
PAP P+ PP
Sbjct: 245 PAPTPTPAIPP 255
>gi|124430752 kinesin family member 26B [Homo sapiens]
Length = 2108
Score = 34.7 bits (78), Expect = 0.033
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 83 QRRNSSEASSGDFLDLKGEGDIHENVDTDLPGSLGQSEEKPVPAAP---VPSPVAPAPVP 139
Q +S S D D EG + +LP S Q PVPAA PSP +P VP
Sbjct: 967 QAAGASPLSESDKEDNGSEGQLTNREGPELPASKMQRSHSPVPAAAPAHSPSPASPRSVP 1026
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 34.3 bits (77), Expect = 0.043
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 118 QSEEKPVPAAPVPSPVAPAPVPSRRNPP 145
+ E+KP PA P P P+A P PS+ PP
Sbjct: 766 EEEKKPPPALPPPPPLAKFPPPSQPQPP 793
>gi|148806902 TBC1 domain family, member 12 [Homo sapiens]
Length = 775
Score = 34.3 bits (77), Expect = 0.043
Identities = 37/125 (29%), Positives = 48/125 (38%), Gaps = 15/125 (12%)
Query: 37 PTEQPVRKNKMASNIFGTPEENQASWAKSAGAKSSGGREDLESSGLQR---------RNS 87
P E P+R + + PE S + + A S ED E G+ S
Sbjct: 194 PLEDPLRSCCLVAADAQEPE-GAGSDSGDSPASSCSSSEDSEQRGVGAGGPEEGAPPATS 252
Query: 88 SEASSGDFLDLKGEGDIHENVDTDLPGSLGQSEEKPVPAA--PVPSPVA---PAPVPSRR 142
+E ++G G DIH N S GQS +P A PVP P A PA +R
Sbjct: 253 AERTNGGAEPRLGFSDIHFNSRNTFQVSRGQSARDHLPPAGPPVPLPAAEQGPAGASARA 312
Query: 143 NPPGG 147
GG
Sbjct: 313 RRSGG 317
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 34.3 bits (77), Expect = 0.043
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 12/129 (9%)
Query: 34 FDEPTEQPVRKNKMASNIFGTPEE-------NQASWAKSAGAKSSGGREDLESSGLQRRN 86
+ +P Q ++ + F P+E +QAS A S S GG+ED+ S R +
Sbjct: 579 YPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSM-TSSKGGQEDMNLSLQSRPS 637
Query: 87 SSEASSG--DFLDLKGEGDIHENVDTD-LPGSLG-QSEEKPVPAAPVPSPVAPAPVPSRR 142
S SG D L + EG + V T + S G QS P +P SP P
Sbjct: 638 SLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSP 697
Query: 143 NPPGGKSSL 151
+P G +S+
Sbjct: 698 SPVGSPASV 706
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 34.3 bits (77), Expect = 0.043
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 12/129 (9%)
Query: 34 FDEPTEQPVRKNKMASNIFGTPEE-------NQASWAKSAGAKSSGGREDLESSGLQRRN 86
+ +P Q ++ + F P+E +QAS A S S GG+ED+ S R +
Sbjct: 579 YPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSM-TSSKGGQEDMNLSLQSRPS 637
Query: 87 SSEASSG--DFLDLKGEGDIHENVDTD-LPGSLG-QSEEKPVPAAPVPSPVAPAPVPSRR 142
S SG D L + EG + V T + S G QS P +P SP P
Sbjct: 638 SLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSP 697
Query: 143 NPPGGKSSL 151
+P G +S+
Sbjct: 698 SPVGSPASV 706
>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
Length = 1894
Score = 33.9 bits (76), Expect = 0.057
Identities = 35/126 (27%), Positives = 47/126 (37%), Gaps = 38/126 (30%)
Query: 35 DEPTEQPVRKNKMASNIFGTPEENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASSGD 94
+ P+++P+ S EE A + K GG+EDL SS + + SS G
Sbjct: 1160 EPPSKRPLSSKSQQSVSAEDDEEEDAGFFK-------GGKEDLLSSSVPKWPSSSTPRG- 1211
Query: 95 FLDLKGEGDIHENVDTDLPGSLGQSEEKPVPA--------APVPSPVAPAP--------V 138
D GSL + E +P A APV P+ P P V
Sbjct: 1212 --------------GKDADGSLAKEEREPAIALAPRGGSLAPVKRPLPPPPGSSPRASHV 1257
Query: 139 PSRRNP 144
PSR P
Sbjct: 1258 PSRLPP 1263
>gi|32698752 hypothetical protein LOC63939 [Homo sapiens]
Length = 383
Score = 33.9 bits (76), Expect = 0.057
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Query: 74 REDLESSGLQRRNS----SEASSGD--FLDLKGEGDIHENVDTDLPGSLGQSEEKPVPAA 127
+E + ++RN + +SG+ FLD + I EN D D L SE P+P +
Sbjct: 49 KESISPEARRKRNPLGSRCQGASGNKLFLDFQSMKIIKENADEDSASDLSDSERIPIPPS 108
Query: 128 PVPSP 132
P+ P
Sbjct: 109 PLTPP 113
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
4 [Homo sapiens]
Length = 1039
Score = 33.5 bits (75), Expect = 0.074
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 73 GREDLESSGLQRRNSSEASSGDFLDLKGEGDIHENVDTDLPGSLGQSEEKPVPAAPV-PS 131
G ED E +QRR + DFLD + EG++ ++++ + P PAAP P
Sbjct: 413 GDED-EEDEVQRRAFLFLNPDDFLDDEDEGELLDSLEPTEAAPPRSGPQSPAPAAPAQPG 471
Query: 132 PVAPAPVPSRRNPPG 146
P P R G
Sbjct: 472 ATLAPPTPPRPRDGG 486
>gi|74048537 praja 1 isoform b [Homo sapiens]
Length = 588
Score = 33.5 bits (75), Expect = 0.074
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 25 GGGSNFSLGFDEPTEQPVRKNKMASN------IFGTPEENQASWAKSAGAKSSGGREDLE 78
GGG N S +EP +P +N + N F T +++ + S ++ E
Sbjct: 187 GGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTANDNEG-H 245
Query: 79 SSGLQRRNSSEASSG 93
S GL RR E+SSG
Sbjct: 246 SDGLARRGRGESSSG 260
>gi|41281725 praja 1 isoform a [Homo sapiens]
Length = 643
Score = 33.5 bits (75), Expect = 0.074
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 25 GGGSNFSLGFDEPTEQPVRKNKMASN------IFGTPEENQASWAKSAGAKSSGGREDLE 78
GGG N S +EP +P +N + N F T +++ + S ++ E
Sbjct: 242 GGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTANDNEG-H 300
Query: 79 SSGLQRRNSSEASSG 93
S GL RR E+SSG
Sbjct: 301 SDGLARRGRGESSSG 315
>gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens]
Length = 2765
Score = 33.5 bits (75), Expect = 0.074
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 12/127 (9%)
Query: 24 PGGGSNFSLGFDEPTEQPVRKNKMASNIFGTPEENQASWAKSAGAKSSGGRED-----LE 78
P G+NF+L E ++ S++ + S A + + GG L
Sbjct: 73 PRQGTNFTLAELGICEPSPHRSGYCSDMGILHQGYSLSTGSDADSDTEGGMSPEHAIRLW 132
Query: 79 SSGLQRRNSSEASSGDFLDLKGEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPV 138
G++ R SS SS + L +EN D G +P+P PS + A +
Sbjct: 133 GRGIKSRRSSGLSSRENSALTLTDSDNENKSDDENG-------RPIPPTSSPSLLPSAQL 185
Query: 139 PSRRNPP 145
PS NPP
Sbjct: 186 PSSHNPP 192
>gi|62362414 c-abl oncogene 1, receptor tyrosine kinase isoform a
[Homo sapiens]
Length = 1130
Score = 33.1 bits (74), Expect = 0.097
Identities = 34/114 (29%), Positives = 45/114 (39%), Gaps = 23/114 (20%)
Query: 38 TEQPVRKNKMASNIFGTPEENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLD 97
+E P R S + P A+ A AG K S + S EA+ L
Sbjct: 882 SESPGRDKGKLSRLKPAPPPPPAASAGKAGGKPS------------QSPSQEAAGEAVLG 929
Query: 98 LKGEGDI---HENVDTDLPGSLGQSEEKPV-PAAPVP-------SPVAPAPVPS 140
K + N D P G+ +KPV PA P P +P++PAPVPS
Sbjct: 930 AKTKATSLVDAVNSDAAKPSQPGEGLKKPVLPATPKPQSAKPSGTPISPAPVPS 983
Score = 28.1 bits (61), Expect = 3.1
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 111 DLPGSLGQSEEKPVPAAPVPSPVAPAPVPSRRNPPGG 147
++P S GQ E P+ P SP+ P R PP G
Sbjct: 549 EMPHSKGQGESDPLDHEPAVSPLLPR---KERGPPEG 582
>gi|62362412 c-abl oncogene 1, receptor tyrosine kinase isoform b
[Homo sapiens]
Length = 1149
Score = 33.1 bits (74), Expect = 0.097
Identities = 34/114 (29%), Positives = 45/114 (39%), Gaps = 23/114 (20%)
Query: 38 TEQPVRKNKMASNIFGTPEENQASWAKSAGAKSSGGREDLESSGLQRRNSSEASSGDFLD 97
+E P R S + P A+ A AG K S + S EA+ L
Sbjct: 901 SESPGRDKGKLSRLKPAPPPPPAASAGKAGGKPS------------QSPSQEAAGEAVLG 948
Query: 98 LKGEGDI---HENVDTDLPGSLGQSEEKPV-PAAPVP-------SPVAPAPVPS 140
K + N D P G+ +KPV PA P P +P++PAPVPS
Sbjct: 949 AKTKATSLVDAVNSDAAKPSQPGEGLKKPVLPATPKPQSAKPSGTPISPAPVPS 1002
Score = 28.1 bits (61), Expect = 3.1
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 111 DLPGSLGQSEEKPVPAAPVPSPVAPAPVPSRRNPPGG 147
++P S GQ E P+ P SP+ P R PP G
Sbjct: 568 EMPHSKGQGESDPLDHEPAVSPLLPR---KERGPPEG 601
>gi|154354972 phosphatase and actin regulator 2 isoform 4 [Homo
sapiens]
Length = 554
Score = 33.1 bits (74), Expect = 0.097
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 49 SNIFGTPEENQASWAKSAGAK-SSGGREDLESSGLQRRNSSEASSGDFLDLKGEGDIHE- 106
S+ P+ ++ + + AG ++ G+ + + SS+ ++ DLKGE
Sbjct: 161 SSTSSRPKASKETVSSKAGTVGTTKGKRKTDKQPITSHLSSDTTTSGTSDLKGEPAETRV 220
Query: 107 ---NVDTDLPGSLGQSEEK------PVPAAPVPSPVAPAPVP 139
++ +PG+ Q+ K P P AP PSP+AP P+P
Sbjct: 221 ESFKLEQTVPGAEEQNTGKFKSMVPPPPVAPAPSPLAP-PLP 261
>gi|154354970 phosphatase and actin regulator 2 isoform 2 [Homo
sapiens]
Length = 565
Score = 33.1 bits (74), Expect = 0.097
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 12/102 (11%)
Query: 49 SNIFGTPEENQASWAKSAGAK-SSGGREDLESSGLQRRNSSEASSGDFLDLKGEGDIHE- 106
S+ P+ ++ + + AG ++ G+ + + SS+ ++ DLKGE
Sbjct: 172 SSTSSRPKASKETVSSKAGTVGTTKGKRKTDKQPITSHLSSDTTTSGTSDLKGEPAETRV 231
Query: 107 ---NVDTDLPGSLGQSEEK------PVPAAPVPSPVAPAPVP 139
++ +PG+ Q+ K P P AP PSP+AP P+P
Sbjct: 232 ESFKLEQTVPGAEEQNTGKFKSMVPPPPVAPAPSPLAP-PLP 272
>gi|115392133 collagen, type XXIV, alpha 1 [Homo sapiens]
Length = 1714
Score = 33.1 bits (74), Expect = 0.097
Identities = 28/93 (30%), Positives = 36/93 (38%), Gaps = 11/93 (11%)
Query: 67 GAKSSGGREDLESSGLQRRNSSEASSGDFLDLKGE----GDIHENVDTDLPGSLGQSEEK 122
G G E L+ + N + + L GE G I E + PG LG EK
Sbjct: 828 GYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEK 887
Query: 123 PVPAAP----VPSPVAPAPVPSR---RNPPGGK 148
V P VP P+ P +P R PPG +
Sbjct: 888 GVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQ 920
>gi|5729790 CCCTC-binding factor [Homo sapiens]
Length = 727
Score = 32.7 bits (73), Expect = 0.13
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 5/84 (5%)
Query: 67 GAKSSGGREDLESSGLQRRNSSEASSGDFLDLKGEGDIHENVDTDLPGSLGQSEEKPVPA 126
G + G E +S ++R E D+ +N D + P + E +P P
Sbjct: 582 GVEGENGGETKKSKRGRKRKMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPV 641
Query: 127 APVPSPVAPAPVPSRRNPPGGKSS 150
P AP P RR P G+++
Sbjct: 642 TP-----APPPAKKRRGRPPGRTN 660
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.304 0.127 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,924,664
Number of Sequences: 37866
Number of extensions: 470255
Number of successful extensions: 4040
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 283
Number of HSP's that attempted gapping in prelim test: 3223
Number of HSP's gapped (non-prelim): 998
length of query: 154
length of database: 18,247,518
effective HSP length: 93
effective length of query: 61
effective length of database: 14,725,980
effective search space: 898284780
effective search space used: 898284780
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.