C20orf177 25931

Name: C20orf177	Sequence: fasta or formatted (383aa)		NCBI GI: 32698752
Description: hypothetical protein LOC63939		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 28 2 C cysteine 1.3 5 1 D aspartate 3.9 15 1 E glutamate 6.3 24 2 F phenylalanine 2.1 8 1 G glycine 6.5 25 2 H histidine 3.4 13 2 I isoleucine 3.4 13 2 K lysine 10.7 41 4 L leucine 8.1 31 3 M methionine 1.0 4 1 N asparagine 3.1 12 1 P proline 8.1 31 2 Q glutamine 5.0 19 1 R arginine 5.5 21 2 S serine 12.8 49 3 T threonine 5.0 19 1 V valine 3.7 14 1 W tryptophan 1.0 4 1 Y tyrosine 1.8 7 3			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC63939 C6orf146 0.031 hypothetical protein LOC222826 SRRM2 0.019 splicing coactivator subunit SRm300 LOC729468 0.013 PREDICTED: similar to Putative PGM5-like protein 1 ... TCHHL1 0.013 trichohyalin-like 1 LOC729468 0.012 PREDICTED: similar to Putative PGM5-like protein 1 ... HN1 0.012 hematological and neurological expressed 1 isoform 3... HN1 0.012 hematological and neurological expressed 1 isoform 1 ... ZNF358 0.011 zinc finger protein 358 NFRKB 0.011 nuclear factor related to kappaB binding protein is... NFRKB 0.011 nuclear factor related to kappaB binding protein iso... TTC14 0.011 tetratricopeptide repeat domain 14 isoform a CIR1 0.011 CBF1 interacting corepressor KIAA1210 0.011 hypothetical protein LOC57481 MAMLD1 0.009 mastermind-like domain containing 1 WHAMM 0.009 WAS protein homolog associated with actin, golgi me... ARL6IP4 0.009 SRp25 nuclear protein isoform 4 ARL6IP4 0.009 SRp25 nuclear protein isoform 2 BCOR 0.009 BCL-6 interacting corepressor isoform a BCOR 0.009 BCL-6 interacting corepressor isoform c BCOR 0.009 BCL-6 interacting corepressor isoform b BCOR 0.009 BCL-6 interacting corepressor isoform a THOC2 0.009 THO complex 2 LOC440829 0.009 PREDICTED: transmembrane protein 46-like BAT3 0.009 HLA-B associated transcript-3 isoform b BAT3 0.009 HLA-B associated transcript-3 isoform b BAT3 0.009 HLA-B associated transcript-3 isoform b BAT3 0.009 HLA-B associated transcript-3 isoform a SYMPK 0.008 symplekin SFRS12IP1 0.008 P18SRP protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.