CCDC53 36044

Name: CCDC53	Sequence: fasta or formatted (194aa)		NCBI GI: 7705622
Description: coiled-coil domain containing 53		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 11 1 C cysteine 0.5 1 1 D aspartate 7.7 15 2 E glutamate 8.8 17 2 F phenylalanine 2.6 5 1 G glycine 4.6 9 1 H histidine 1.0 2 1 I isoleucine 4.6 9 1 K lysine 4.1 8 1 L leucine 9.8 19 2 M methionine 2.6 5 1 N asparagine 4.1 8 1 P proline 6.2 12 1 Q glutamine 6.2 12 2 R arginine 3.6 7 1 S serine 10.3 20 2 T threonine 6.7 13 2 V valine 9.8 19 2 W tryptophan 0.0 0 0 Y tyrosine 1.0 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 53 GON4L 0.014 gon-4-like isoform a NDUFA9 0.014 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9... LYST 0.014 lysosomal trafficking regulator IMPG2 0.014 interphotoreceptor matrix proteoglycan 2 EIF4G1 0.011 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.011 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.011 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.011 eukaryotic translation initiation factor 4 gamma, 1 ... EIF4G1 0.011 eukaryotic translation initiation factor 4 gamma, 1 ... CTAGE5 0.011 CTAGE family, member 5 isoform 3 CTAGE5 0.011 CTAGE family, member 5 isoform 1 CTAGE5 0.011 CTAGE family, member 5 isoform 4 CTAGE5 0.011 CTAGE family, member 5 isoform 2 ZDBF2 0.011 zinc finger, DBF-type containing 2 LOC653073 0.011 PREDICTED: Golgin subfamily A member 8-like protein... KTN1 0.009 kinectin 1 isoform b KTN1 0.009 kinectin 1 isoform a KTN1 0.009 kinectin 1 isoform c KTN1 0.009 kinectin 1 isoform a SYNE1 0.009 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.009 spectrin repeat containing, nuclear envelope 1 isof... DCAF5 0.009 WD repeat domain 22 LOC728498 0.009 PREDICTED: similar to Golgin subfamily A member 8-l... ZNF236 0.009 zinc finger protein 236 LOC653125 0.009 PREDICTED: similar to Golgin subfamily A member 8-l... REXO1 0.009 transcription elongation factor B polypeptide 3 bin... ZNF652 0.006 zinc finger protein 652 ZNF652 0.006 zinc finger protein 652 SHANK2 0.006 SH3 and multiple ankyrin repeat domains 2 isoform 2 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.