Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 14141170
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14141170 metastasis-associated protein 2 [Homo sapiens]
(668 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14141170 metastasis-associated protein 2 [Homo sapiens] 1345 0.0
gi|115527080 metastasis associated protein [Homo sapiens] 793 0.0
gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens] 728 0.0
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 157 3e-38
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 157 3e-38
gi|7661892 REST corepressor 1 [Homo sapiens] 73 7e-13
gi|94721313 mesoderm induction early response 1, family member 3... 69 2e-11
gi|225735631 mesoderm induction early response 1 isoform g [Homo... 66 1e-10
gi|225735619 mesoderm induction early response 1 isoform i [Homo... 66 1e-10
gi|225735617 mesoderm induction early response 1 isoform h [Homo... 66 1e-10
gi|225735615 mesoderm induction early response 1 isoform a [Homo... 66 1e-10
gi|118130872 mesoderm induction early response 1 isoform f [Homo... 66 1e-10
gi|225735612 mesoderm induction early response 1 isoform e [Homo... 66 1e-10
gi|225735610 mesoderm induction early response 1 isoform d [Homo... 66 1e-10
gi|118130815 mesoderm induction early response 1 isoform c [Homo... 66 1e-10
gi|225735607 mesoderm induction early response 1 isoform b [Homo... 66 1e-10
gi|225735605 mesoderm induction early response 1 isoform a [Homo... 66 1e-10
gi|209977084 REST corepressor 3 isoform c [Homo sapiens] 65 3e-10
gi|209977082 REST corepressor 3 isoform b [Homo sapiens] 65 3e-10
gi|209977080 REST corepressor 3 isoform a [Homo sapiens] 65 3e-10
gi|8922733 REST corepressor 3 isoform d [Homo sapiens] 65 3e-10
gi|27734799 REST corepressor 2 [Homo sapiens] 65 3e-10
gi|45267839 mesoderm induction early response 1, family member 2... 55 3e-07
gi|15812226 transcriptional regulating factor 1 [Homo sapiens] 44 4e-04
gi|210031154 zinc finger protein 541 [Homo sapiens] 42 0.002
gi|112807226 hypothetical protein LOC91748 [Homo sapiens] 39 0.012
gi|44890062 hypothetical protein LOC91748 [Homo sapiens] 39 0.012
gi|169204926 PREDICTED: similar to hCG2041217 [Homo sapiens] 39 0.020
gi|169205586 PREDICTED: similar to hCG2041217 [Homo sapiens] 39 0.020
gi|169203873 PREDICTED: similar to REST corepressor 2 [Homo sapi... 39 0.020
>gi|14141170 metastasis-associated protein 2 [Homo sapiens]
Length = 668
Score = 1345 bits (3481), Expect = 0.0
Identities = 668/668 (100%), Positives = 668/668 (100%)
Query: 1 MAANMYRVGDYVYFENSSSNPYLVRRIEELNKTANGNVEAKVVCLFRRRDISSSLNSLAD 60
MAANMYRVGDYVYFENSSSNPYLVRRIEELNKTANGNVEAKVVCLFRRRDISSSLNSLAD
Sbjct: 1 MAANMYRVGDYVYFENSSSNPYLVRRIEELNKTANGNVEAKVVCLFRRRDISSSLNSLAD 60
Query: 61 SNAREFEEESKQPGVSEQQRHQLKHRELFLSRQFESLPATHIRGKCSVTLLNETDILSQY 120
SNAREFEEESKQPGVSEQQRHQLKHRELFLSRQFESLPATHIRGKCSVTLLNETDILSQY
Sbjct: 61 SNAREFEEESKQPGVSEQQRHQLKHRELFLSRQFESLPATHIRGKCSVTLLNETDILSQY 120
Query: 121 LEKEDCFFYSLVFDPVQKTLLADQGEIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWD 180
LEKEDCFFYSLVFDPVQKTLLADQGEIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWD
Sbjct: 121 LEKEDCFFYSLVFDPVQKTLLADQGEIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWD 180
Query: 181 PDNPLTDRQIDQFLVVARAVGTFARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQR 240
PDNPLTDRQIDQFLVVARAVGTFARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQR
Sbjct: 181 PDNPLTDRQIDQFLVVARAVGTFARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQR 240
Query: 241 NGYDLAKAMSTLVPQGGPVLCRDEMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSL 300
NGYDLAKAMSTLVPQGGPVLCRDEMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSL
Sbjct: 241 NGYDLAKAMSTLVPQGGPVLCRDEMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSL 300
Query: 301 ASIVQFYYMWKTTDRYIQQKRLKAAEADSKLKQVYIPTYTKPNPNQIISVGSKPGMNGAG 360
ASIVQFYYMWKTTDRYIQQKRLKAAEADSKLKQVYIPTYTKPNPNQIISVGSKPGMNGAG
Sbjct: 301 ASIVQFYYMWKTTDRYIQQKRLKAAEADSKLKQVYIPTYTKPNPNQIISVGSKPGMNGAG 360
Query: 361 FQKGLTCESCHTTQSAQWYAWGPPNMQCRLCASCWIYWKKYGGLKTPTQLEGATRGTTEP 420
FQKGLTCESCHTTQSAQWYAWGPPNMQCRLCASCWIYWKKYGGLKTPTQLEGATRGTTEP
Sbjct: 361 FQKGLTCESCHTTQSAQWYAWGPPNMQCRLCASCWIYWKKYGGLKTPTQLEGATRGTTEP 420
Query: 421 HSRGHLSRPEAQSLSPYTTSANRAKLLAKNRQTFLLQTTKLTRLARRMCRDLLQPRRAAR 480
HSRGHLSRPEAQSLSPYTTSANRAKLLAKNRQTFLLQTTKLTRLARRMCRDLLQPRRAAR
Sbjct: 421 HSRGHLSRPEAQSLSPYTTSANRAKLLAKNRQTFLLQTTKLTRLARRMCRDLLQPRRAAR 480
Query: 481 RPYAPINANAIKAECSIRLPKAAKTPLKIHPLVRLPLATIVKDLVAQAPLKPKTPRGTKT 540
RPYAPINANAIKAECSIRLPKAAKTPLKIHPLVRLPLATIVKDLVAQAPLKPKTPRGTKT
Sbjct: 481 RPYAPINANAIKAECSIRLPKAAKTPLKIHPLVRLPLATIVKDLVAQAPLKPKTPRGTKT 540
Query: 541 PINRNQLSQNRGLGGIMVKRAYETMAGAGVPFSANGRPLASGIRSSSQPAAKRQKLNPAD 600
PINRNQLSQNRGLGGIMVKRAYETMAGAGVPFSANGRPLASGIRSSSQPAAKRQKLNPAD
Sbjct: 541 PINRNQLSQNRGLGGIMVKRAYETMAGAGVPFSANGRPLASGIRSSSQPAAKRQKLNPAD 600
Query: 601 APNPVVFVATKDTRALRKALTHLEMRRAARRPNLPLKVKPTLIAVRPPVPLPAPSHPAST 660
APNPVVFVATKDTRALRKALTHLEMRRAARRPNLPLKVKPTLIAVRPPVPLPAPSHPAST
Sbjct: 601 APNPVVFVATKDTRALRKALTHLEMRRAARRPNLPLKVKPTLIAVRPPVPLPAPSHPAST 660
Query: 661 NEPIVLED 668
NEPIVLED
Sbjct: 661 NEPIVLED 668
>gi|115527080 metastasis associated protein [Homo sapiens]
Length = 715
Score = 793 bits (2048), Expect = 0.0
Identities = 424/733 (57%), Positives = 509/733 (69%), Gaps = 83/733 (11%)
Query: 1 MAANMYRVGDYVYFENSSSNPYLVRRIEELNKTANGNVEAKVVCLFRRRDISSSLNSLAD 60
MAANMYRVGDYVYFENSSSNPYL+RRIEELNKTANGNVEAKVVC +RRRDISS+L +LAD
Sbjct: 1 MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTANGNVEAKVVCFYRRRDISSTLIALAD 60
Query: 61 SNAR-----------------EFEEESKQP---GVSEQQRHQLKHRELFLSRQFESLPAT 100
+A E EEE + P + E+ +HQL+HRELFLSRQ ESLPAT
Sbjct: 61 KHATLSVCYKAGPGADNGEEGEIEEEMENPEMVDLPEKLKHQLRHRELFLSRQLESLPAT 120
Query: 101 HIRGKCSVTLLNETDILSQYLEKEDCFFYSLVFDPVQKTLLADQGEIRVGCKYQAEIPDR 160
HIRGKCSVTLLNET+ L YLE+ED FFYSLV+DP QKTLLAD+GEIRVG +YQA+I D
Sbjct: 121 HIRGKCSVTLLNETESLKSYLEREDFFFYSLVYDPQQKTLLADKGEIRVGNRYQADITDL 180
Query: 161 LVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFARALDCSSSIRQPSLHM 220
L EGE D R+Q ++E +VW+ NPLTD+QIDQFLVVAR+VGTFARALDCSSS+RQPSLHM
Sbjct: 181 LKEGEEDGRDQSRLETQVWEAHNPLTDKQIDQFLVVARSVGTFARALDCSSSVRQPSLHM 240
Query: 221 SAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEMEEWSASEAMLFEEAL 280
SAAAASRDITLFHAMDTL +N YD++KA+S LVPQGGPVLCRDEMEEWSASEA LFEEAL
Sbjct: 241 SAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVLCRDEMEEWSASEANLFEEAL 300
Query: 281 EKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYIQQKRLKAAEADSKLKQVYIPTYT 340
EKYGKDF DI+QDFLPWKSL SI+++YYMWKTTDRY+QQKRLKAAEA+SKLKQVYIP Y
Sbjct: 301 EKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPNYN 360
Query: 341 KPNPNQIISVGSKPG-MNGAGFQ-----KGLTCESCHTTQSAQWYAWGPPNMQCRLCASC 394
KPNPNQI K G +NG G G CESC+TTQS QWY+WGPPNMQCRLCASC
Sbjct: 361 KPNPNQISVNNVKAGVVNGTGAPGQSPGAGRACESCYTTQSYQWYSWGPPNMQCRLCASC 420
Query: 395 WIYWKKYGGLKTPTQLEGATRGTTEPHSRGHLSRPEAQSLSPY---TTSANRAKLLAKNR 451
W YWKKYGGLK PT+L+G G P ++SP+ S+ K K R
Sbjct: 421 WTYWKKYGGLKMPTRLDGERPG------------PNRSNMSPHGLPARSSGSPKFAMKTR 468
Query: 452 QTFLLQTTKLTRLARRMCRDLLQPRRAARRPYAPINANAIKAECSIRLPKAAKTPLKIHP 511
Q F L TTKLTR+ARR+CR++L+P AAR PY PIN+ AIKAEC+ RLP+A+++PL +
Sbjct: 469 QAFYLHTTKLTRIARRLCREILRPWHAARHPYLPINSAAIKAECTARLPEASQSPLVLKQ 528
Query: 512 LVRLPLATIVKDL---------------------VAQAPLKPKTPRGTKTPINRNQLSQN 550
VR PL +++ L + A + P G+ T + + Q+
Sbjct: 529 AVRKPLEAVLRYLETHPRPPKPDPVKSVSSVLSSLTPAKVAPVINNGSPTILGKRSYEQH 588
Query: 551 RGLGGIMVKRAYETMAGAGVPFSA-----------NGRPLASG---IRSSSQPAAKRQKL 596
G+ G M KR G A NG+ + IR S P KR+++
Sbjct: 589 NGVDGNMKKRLLMPSRGLANHGQARHMGPSRNLLLNGKSYPTKVRLIRGGSLPPVKRRRM 648
Query: 597 NPADAPNPVVFVATKDTRALRKALTHLEMRRAARRPNLPLKVKPT-LIAVRPPVPLPAPS 655
N DAP+ V ++AT++TR +RK L+ E +RAARRP P+ ++ + + RPP P P
Sbjct: 649 NWIDAPDDVFYMATEETRKIRKLLSSSETKRAARRPYKPIALRQSQALPPRPPPPAPV-- 706
Query: 656 HPASTNEPIVLED 668
+EPIV+ED
Sbjct: 707 ----NDEPIVIED 715
>gi|50838795 metastasis associated 1 family, member 3 [Homo sapiens]
Length = 515
Score = 728 bits (1880), Expect = 0.0
Identities = 364/515 (70%), Positives = 422/515 (81%), Gaps = 18/515 (3%)
Query: 1 MAANMYRVGDYVYFENSSSNPYLVRRIEELNKTANGNVEAKVVCLFRRRDISSSLNSLAD 60
MAANMYRVGDYVYFENSSSNPYL+RRIEELNKTA+GNVEAKVVC +RRRDIS++L LAD
Sbjct: 1 MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTASGNVEAKVVCFYRRRDISNTLIMLAD 60
Query: 61 SNAREFEEESK---QPGVSEQQRHQLKHRELFLSRQFESLPATHIRGKCSVTLLNETDIL 117
+A+E EEES+ + ++++Q+HQLKHRELFLSRQ+ESLPATHIRGKCSV LLNET+ +
Sbjct: 61 KHAKEIEEESETTVEADLTDKQKHQLKHRELFLSRQYESLPATHIRGKCSVALLNETESV 120
Query: 118 SQYLEKEDCFFYSLVFDPVQKTLLADQGEIRVGCKYQAEIPDRLVEGESDNRNQQKMEMK 177
YL+KED FFYSLV+DP KTLLAD+GEIRVG +YQA+IP+ L+EGESD R Q K+E+K
Sbjct: 121 LSYLDKEDTFFYSLVYDPSLKTLLADKGEIRVGPRYQADIPEMLLEGESDEREQSKLEVK 180
Query: 178 VWDPDNPLTDRQIDQFLVVARAVGTFARALDCSSSIRQPSLHMSAAAASRDITLFHAMDT 237
VWDP++PLTDRQIDQFLVVARAVGTFARALDCSSS+RQPSLHMSAAAASRDITLFHAMDT
Sbjct: 181 VWDPNSPLTDRQIDQFLVVARAVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDT 240
Query: 238 LQRNGYDLAKAMSTLVPQGGPVLCRDEMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPW 297
L R+ YDL+ A+S LVP GGPVLCRDEMEEWSASEA LFEEALEKYGKDFNDIRQDFLPW
Sbjct: 241 LYRHSYDLSSAISVLVPLGGPVLCRDEMEEWSASEASLFEEALEKYGKDFNDIRQDFLPW 300
Query: 298 KSLASIVQFYYMWKTTDRYIQQKRLKAAEADSKLKQVYIPTYTKPNPNQIISVGSKPG-M 356
KSL SI+++YYMWKTTDRY+QQKRLKAAEA+SKLKQVYIPTY+KPNPNQI + KPG +
Sbjct: 301 KSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPTYSKPNPNQISTSNGKPGAV 360
Query: 357 NGA---GFQK-----GLTCESCHTTQSAQWYAWGPPNMQCRLCASCWIYWKKYGGLKTPT 408
NGA FQ G CESC+ TQS QWY+WGPPNMQCRLCA CW+YWKKYGGLK PT
Sbjct: 361 NGAVGTTFQPQNPLLGRACESCYATQSHQWYSWGPPNMQCRLCAICWLYWKKYGGLKMPT 420
Query: 409 QLE----GATRGTTEPHSRGHLSRPEAQSLSPYTTSANRAKLLAKNRQTFLLQTTKLTRL 464
Q E + T +P R H+SR Q + T + K K RQ F L TT T+
Sbjct: 421 QSEEEKLSPSPTTEDPRVRSHVSRQAMQGMPVRNTGS--PKSAVKTRQAFFLHTTYFTKF 478
Query: 465 ARRMCRDLLQPRRAARRPYAPINANAIKAECSIRL 499
AR++C++ L+ R+AARRP+ IN AI+AEC + L
Sbjct: 479 ARQVCKNTLRLRQAARRPFVAINYAAIRAECKMLL 513
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 157 bits (397), Expect = 3e-38
Identities = 107/334 (32%), Positives = 162/334 (48%), Gaps = 25/334 (7%)
Query: 83 LKHRELFLSRQFESLPATHIRGKCSVTLLNETDILSQYLEKEDCFFYSLVFDPVQKTLLA 142
+K+RELF+S ++ A +RGKC+++ ++ ++ + D FFY L ++P + L +
Sbjct: 222 IKNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNS 281
Query: 143 DQGEIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGT 202
QGEIRVG +QA++PD D + E VW P + D + +L AR++
Sbjct: 282 TQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPG--VNDCDLLMYLRAARSMAA 339
Query: 203 FARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCR 262
FA D S+ AASRD T +A++TL +GYD KA+ LV + P L
Sbjct: 340 FAGMCDGGST------EDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIE 393
Query: 263 DEMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTT-----DRYI 317
+ W+ E F + L +YGK+F IR++ LP K ++ FYY WK T R
Sbjct: 394 ---KCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASSRAH 450
Query: 318 QQKRLKAAEADSKLKQVYIPTYTKPNPNQI----ISVGSKPGMNGAGFQ---KGLTCESC 370
++ R +A K + P T P +S S+ + + KG C C
Sbjct: 451 RRHRRQAVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRHC 510
Query: 371 HTTQSAQWYAWGPPNMQCRLCASCWIYWKKYGGL 404
TT S W+ G N+ LC C I++KKYG L
Sbjct: 511 FTTTSKDWHHGGRENI--LLCTDCRIHFKKYGEL 542
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 157 bits (397), Expect = 3e-38
Identities = 107/334 (32%), Positives = 162/334 (48%), Gaps = 25/334 (7%)
Query: 83 LKHRELFLSRQFESLPATHIRGKCSVTLLNETDILSQYLEKEDCFFYSLVFDPVQKTLLA 142
+K+RELF+S ++ A +RGKC+++ ++ ++ + D FFY L ++P + L +
Sbjct: 222 IKNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNS 281
Query: 143 DQGEIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGT 202
QGEIRVG +QA++PD D + E VW P + D + +L AR++
Sbjct: 282 TQGEIRVGPSHQAKLPDLQPFPSPDGDTVTQHEELVWMPG--VNDCDLLMYLRAARSMAA 339
Query: 203 FARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCR 262
FA D S+ AASRD T +A++TL +GYD KA+ LV + P L
Sbjct: 340 FAGMCDGGST------EDGCVAASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIE 393
Query: 263 DEMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTT-----DRYI 317
+ W+ E F + L +YGK+F IR++ LP K ++ FYY WK T R
Sbjct: 394 ---KCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASSRAH 450
Query: 318 QQKRLKAAEADSKLKQVYIPTYTKPNPNQI----ISVGSKPGMNGAGFQ---KGLTCESC 370
++ R +A K + P T P +S S+ + + KG C C
Sbjct: 451 RRHRRQAVFRRIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRHC 510
Query: 371 HTTQSAQWYAWGPPNMQCRLCASCWIYWKKYGGL 404
TT S W+ G N+ LC C I++KKYG L
Sbjct: 511 FTTTSKDWHHGGRENI--LLCTDCRIHFKKYGEL 542
>gi|7661892 REST corepressor 1 [Homo sapiens]
Length = 482
Score = 73.2 bits (178), Expect = 7e-13
Identities = 52/198 (26%), Positives = 101/198 (51%), Gaps = 43/198 (21%)
Query: 145 GEIRVGCKYQAEIPDRLVEGESDNRNQQK--MEMKVWDPDNPLTDRQIDQFLVVARAVGT 202
G +RVG +YQA +PD + R+Q++ + M VW P+ L++ ++D+++ +A+
Sbjct: 100 GGMRVGPQYQAVVPD-FDPAKLARRSQERDNLGMLVWSPNQNLSEAKLDEYIAIAKE--- 155
Query: 203 FARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCR 262
+ A+ L + +++ K+++ L P P
Sbjct: 156 -----------------------KHGYNMEQALGMLFWHKHNIEKSLADL-PNFTPF--- 188
Query: 263 DEMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTT-------DR 315
+EW+ + +LFE+A +GK F+ I+Q LP KS+AS+V+FYY WK T DR
Sbjct: 189 --PDEWTVEDKVLFEQAFSFHGKTFHRIQQ-MLPDKSIASLVKFYYSWKKTRTKTSVMDR 245
Query: 316 YIQQKRLKAAEADSKLKQ 333
+ ++++ + E++ +L++
Sbjct: 246 HARKQKREREESEDELEE 263
Score = 34.7 bits (78), Expect = 0.29
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Query: 204 ARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRD 263
A A ++ +RQ L M + R I + Q N K + P P + +
Sbjct: 326 ANATAATTVLRQ--LDMELVSVKRQI-----QNIKQTNSALKEKLDGGIEPYRLPEVIQK 378
Query: 264 EMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYIQQKRLK 323
W+ E +L +A+ KYG+DF I D + KS+ + F+ ++ R+ + L+
Sbjct: 379 CNARWTTEEQLLAVQAIRKYGRDFQAI-SDVIGNKSVVQVKNFFVNYRR--RFNIDEVLQ 435
Query: 324 AAEADSKLKQVYIPTYTKP 342
EA+ ++ P+ KP
Sbjct: 436 EWEAEHGKEETNGPSNQKP 454
>gi|94721313 mesoderm induction early response 1, family member 3
[Homo sapiens]
Length = 549
Score = 68.6 bits (166), Expect = 2e-11
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 16/171 (9%)
Query: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFAR 205
EI +G +YQAEIP L E + + + + + +W PD L + ++ ++LV +
Sbjct: 175 EIMIGLQYQAEIPPYLGEYDGNEKVYENEDQLLWCPDVVL-ESKVKEYLVETSLRTGSEK 233
Query: 206 ALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEM 265
+D +SA +RD A+ L + +++ +A+ G M
Sbjct: 234 IMD----------RISAGTHTRDNE--QALYELLKCNHNIKEAIERYCCNGK---ASQGM 278
Query: 266 EEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316
W+ E FE AL +GKDF+ I+++ + +++A V FYYMWK ++RY
Sbjct: 279 TAWTEEECRSFEHALMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERY 329
>gi|225735631 mesoderm induction early response 1 isoform g [Homo
sapiens]
Length = 470
Score = 65.9 bits (159), Expect = 1e-10
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTF-- 203
EI VG +QAEIP + + + + + + +WDP+ D+ I +R G
Sbjct: 198 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 257
Query: 204 ARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRD 263
A+ S I+ A+ L + +D +A+ L + R+
Sbjct: 258 VEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAARE 300
Query: 264 EMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316
E+ W+ E FE+ L+ YGKDF+ I+ + + +S+ V FYYMWK ++RY
Sbjct: 301 ELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 353
>gi|225735619 mesoderm induction early response 1 isoform i [Homo
sapiens]
Length = 370
Score = 65.9 bits (159), Expect = 1e-10
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTF-- 203
EI VG +QAEIP + + + + + + +WDP+ D+ I +R G
Sbjct: 118 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 177
Query: 204 ARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRD 263
A+ S I+ A+ L + +D +A+ L + R+
Sbjct: 178 VEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAARE 220
Query: 264 EMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316
E+ W+ E FE+ L+ YGKDF+ I+ + + +S+ V FYYMWK ++RY
Sbjct: 221 ELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 273
>gi|225735617 mesoderm induction early response 1 isoform h [Homo
sapiens]
Length = 485
Score = 65.9 bits (159), Expect = 1e-10
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTF-- 203
EI VG +QAEIP + + + + + + +WDP+ D+ I +R G
Sbjct: 154 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 213
Query: 204 ARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRD 263
A+ S I+ A+ L + +D +A+ L + R+
Sbjct: 214 VEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAARE 256
Query: 264 EMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316
E+ W+ E FE+ L+ YGKDF+ I+ + + +S+ V FYYMWK ++RY
Sbjct: 257 ELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 309
>gi|225735615 mesoderm induction early response 1 isoform a [Homo
sapiens]
Length = 529
Score = 65.9 bits (159), Expect = 1e-10
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTF-- 203
EI VG +QAEIP + + + + + + +WDP+ D+ I +R G
Sbjct: 198 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 257
Query: 204 ARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRD 263
A+ S I+ A+ L + +D +A+ L + R+
Sbjct: 258 VEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAARE 300
Query: 264 EMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316
E+ W+ E FE+ L+ YGKDF+ I+ + + +S+ V FYYMWK ++RY
Sbjct: 301 ELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 353
>gi|118130872 mesoderm induction early response 1 isoform f [Homo
sapiens]
Length = 433
Score = 65.9 bits (159), Expect = 1e-10
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTF-- 203
EI VG +QAEIP + + + + + + +WDP+ D+ I +R G
Sbjct: 181 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 240
Query: 204 ARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRD 263
A+ S I+ A+ L + +D +A+ L + R+
Sbjct: 241 VEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAARE 283
Query: 264 EMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316
E+ W+ E FE+ L+ YGKDF+ I+ + + +S+ V FYYMWK ++RY
Sbjct: 284 ELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 336
>gi|225735612 mesoderm induction early response 1 isoform e [Homo
sapiens]
Length = 486
Score = 65.9 bits (159), Expect = 1e-10
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTF-- 203
EI VG +QAEIP + + + + + + +WDP+ D+ I +R G
Sbjct: 234 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 293
Query: 204 ARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRD 263
A+ S I+ A+ L + +D +A+ L + R+
Sbjct: 294 VEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAARE 336
Query: 264 EMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316
E+ W+ E FE+ L+ YGKDF+ I+ + + +S+ V FYYMWK ++RY
Sbjct: 337 ELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 389
>gi|225735610 mesoderm induction early response 1 isoform d [Homo
sapiens]
Length = 450
Score = 65.9 bits (159), Expect = 1e-10
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTF-- 203
EI VG +QAEIP + + + + + + +WDP+ D+ I +R G
Sbjct: 198 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 257
Query: 204 ARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRD 263
A+ S I+ A+ L + +D +A+ L + R+
Sbjct: 258 VEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAARE 300
Query: 264 EMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316
E+ W+ E FE+ L+ YGKDF+ I+ + + +S+ V FYYMWK ++RY
Sbjct: 301 ELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 353
>gi|118130815 mesoderm induction early response 1 isoform c [Homo
sapiens]
Length = 512
Score = 65.9 bits (159), Expect = 1e-10
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTF-- 203
EI VG +QAEIP + + + + + + +WDP+ D+ I +R G
Sbjct: 181 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 240
Query: 204 ARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRD 263
A+ S I+ A+ L + +D +A+ L + R+
Sbjct: 241 VEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAARE 283
Query: 264 EMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316
E+ W+ E FE+ L+ YGKDF+ I+ + + +S+ V FYYMWK ++RY
Sbjct: 284 ELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 336
>gi|225735607 mesoderm induction early response 1 isoform b [Homo
sapiens]
Length = 565
Score = 65.9 bits (159), Expect = 1e-10
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTF-- 203
EI VG +QAEIP + + + + + + +WDP+ D+ I +R G
Sbjct: 234 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 293
Query: 204 ARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRD 263
A+ S I+ A+ L + +D +A+ L + R+
Sbjct: 294 VEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAARE 336
Query: 264 EMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316
E+ W+ E FE+ L+ YGKDF+ I+ + + +S+ V FYYMWK ++RY
Sbjct: 337 ELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 389
>gi|225735605 mesoderm induction early response 1 isoform a [Homo
sapiens]
Length = 529
Score = 65.9 bits (159), Expect = 1e-10
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTF-- 203
EI VG +QAEIP + + + + + + +WDP+ D+ I +R G
Sbjct: 198 EIMVGSMFQAEIPVGICRYKENEKVYENDDQLLWDPEYLPEDKVIIFLKDASRRTGDEKG 257
Query: 204 ARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRD 263
A+ S I+ A+ L + +D +A+ L + R+
Sbjct: 258 VEAIPEGSHIKDNE---------------QALYELVKCNFDTEEALRRL--RFNVKAARE 300
Query: 264 EMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY 316
E+ W+ E FE+ L+ YGKDF+ I+ + + +S+ V FYYMWK ++RY
Sbjct: 301 ELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERY 353
>gi|209977084 REST corepressor 3 isoform c [Homo sapiens]
Length = 449
Score = 64.7 bits (156), Expect = 3e-10
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 34/167 (20%)
Query: 147 IRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFARA 206
+RVG +YQA IP+ G + ++ M VW P + + D ++D+++ +A+
Sbjct: 59 MRVGAEYQARIPE-FDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKE------- 110
Query: 207 LDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEME 266
+ A+ L + +++ K+++ L P P +
Sbjct: 111 -------------------KHGYNVEQALGMLFWHKHNIEKSLADL-PNFTPF-----PD 145
Query: 267 EWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTT 313
EW+ + +LFE+A +GK F+ I+Q LP K++AS+V++YY WK T
Sbjct: 146 EWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKT 191
Score = 29.6 bits (65), Expect = 9.4
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 268 WSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYIQQKRLKAAEA 327
W+ E +L + + KYGKDF I D + K++ + F+ ++ R+ ++ L+ EA
Sbjct: 348 WTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNFFVNYRR--RFNLEEVLQEWEA 404
Query: 328 D 328
+
Sbjct: 405 E 405
>gi|209977082 REST corepressor 3 isoform b [Homo sapiens]
Length = 436
Score = 64.7 bits (156), Expect = 3e-10
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 34/167 (20%)
Query: 147 IRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFARA 206
+RVG +YQA IP+ G + ++ M VW P + + D ++D+++ +A+
Sbjct: 59 MRVGAEYQARIPE-FDPGATKYTDKDNGGMLVWSPYHSIPDARLDEYIAIAKE------- 110
Query: 207 LDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEME 266
+ A+ L + +++ K+++ L P P +
Sbjct: 111 -------------------KHGYNVEQALGMLFWHKHNIEKSLADL-PNFTPF-----PD 145
Query: 267 EWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTT 313
EW+ + +LFE+A +GK F+ I+Q LP K++AS+V++YY WK T
Sbjct: 146 EWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKT 191
>gi|209977080 REST corepressor 3 isoform a [Homo sapiens]
Length = 553
Score = 64.7 bits (156), Expect = 3e-10
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 34/167 (20%)
Query: 147 IRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFARA 206
+RVG +YQA IP+ G + ++ M VW P + + D ++D+++ +A+
Sbjct: 59 MRVGAEYQARIPE-FDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKE------- 110
Query: 207 LDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEME 266
+ A+ L + +++ K+++ L P P +
Sbjct: 111 -------------------KHGYNVEQALGMLFWHKHNIEKSLADL-PNFTPF-----PD 145
Query: 267 EWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTT 313
EW+ + +LFE+A +GK F+ I+Q LP K++AS+V++YY WK T
Sbjct: 146 EWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKT 191
Score = 29.6 bits (65), Expect = 9.4
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 268 WSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYIQQKRLKAAEA 327
W+ E +L + + KYGKDF I D + K++ + F+ ++ R+ ++ L+ EA
Sbjct: 348 WTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNFFVNYRR--RFNLEEVLQEWEA 404
Query: 328 D 328
+
Sbjct: 405 E 405
>gi|8922733 REST corepressor 3 isoform d [Homo sapiens]
Length = 495
Score = 64.7 bits (156), Expect = 3e-10
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 34/167 (20%)
Query: 147 IRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFARA 206
+RVG +YQA IP+ G + ++ M VW P + + D ++D+++ +A+
Sbjct: 1 MRVGAEYQARIPE-FDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAKE------- 52
Query: 207 LDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEME 266
+ A+ L + +++ K+++ L P P +
Sbjct: 53 -------------------KHGYNVEQALGMLFWHKHNIEKSLADL-PNFTPF-----PD 87
Query: 267 EWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTT 313
EW+ + +LFE+A +GK F+ I+Q LP K++AS+V++YY WK T
Sbjct: 88 EWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKT 133
Score = 29.6 bits (65), Expect = 9.4
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 268 WSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYIQQKRLKAAEA 327
W+ E +L + + KYGKDF I D + K++ + F+ ++ R+ ++ L+ EA
Sbjct: 290 WTTEEQLLAVQGVRKYGKDFQAI-ADVIGNKTVGQVKNFFVNYRR--RFNLEEVLQEWEA 346
Query: 328 D 328
+
Sbjct: 347 E 347
>gi|27734799 REST corepressor 2 [Homo sapiens]
Length = 523
Score = 64.7 bits (156), Expect = 3e-10
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 33/167 (19%)
Query: 147 IRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFARA 206
IRVG YQA IP+ E + N++ M VW P++ ++D ++D+++ +A+
Sbjct: 46 IRVGTNYQAVIPECKPESPARYSNKELKGMLVWSPNHCVSDAKLDKYIAMAK-------- 97
Query: 207 LDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEME 266
H + + L+H D ++++ DLA T P +
Sbjct: 98 ----------EKHGYNIEQALGMLLWHKHD-VEKSLADLANF--TPFP-----------D 133
Query: 267 EWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTT 313
EW+ + +LFE+A +GK F I+Q LP K + S+V++YY WK T
Sbjct: 134 EWTVEDKVLFEQAFGFHGKCFQRIQQ-MLPDKLIPSLVKYYYSWKKT 179
Score = 30.0 bits (66), Expect = 7.2
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 268 WSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYIQQKRLKAAEA 327
W+ E +L +A+ +YGKDF I + + K+L + F+ ++ R+ ++ L+ EA
Sbjct: 332 WTTDEQLLAVQAIRRYGKDFGAI-AEVIGNKTLTQVKTFFVSYRR--RFNLEEVLQEWEA 388
Query: 328 D 328
+
Sbjct: 389 E 389
>gi|45267839 mesoderm induction early response 1, family member 2
[Homo sapiens]
Length = 545
Score = 54.7 bits (130), Expect = 3e-07
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 19/180 (10%)
Query: 146 EIRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVARAVGTFAR 205
EI VG ++QA++ + + + + + ++ +WDP + L +R++++FL RAV
Sbjct: 196 EIMVGPQFQADLSNLHLNRHCEKIYENEDQL-LWDP-SVLPEREVEEFLY--RAVKRRWH 251
Query: 206 ALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEM 265
+ P L A + L+ L + +++ +A+ L + + RD +
Sbjct: 252 EM------AGPQLPEGEAVKDSEQALYE----LVKCNFNVEEALRRL--RFNVKVIRDGL 299
Query: 266 EEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRY---IQQKRL 322
WS E FE +GK+F+ I+ + + +S+ V++YY+WK ++RY QQ RL
Sbjct: 300 CAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQQTRL 359
>gi|15812226 transcriptional regulating factor 1 [Homo sapiens]
Length = 1200
Score = 44.3 bits (103), Expect = 4e-04
Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 17/182 (9%)
Query: 147 IRVGCKYQAEIPD-RLVEGESDNRNQQKMEMKVW-DPDNPLTDRQIDQFLVVARAVGTFA 204
I +G ++QAEIP+ + + + + ++ + K W + +N ++++ L + +
Sbjct: 781 INIGLRFQAEIPELQDISALAQDTHKATLVWKPWPELENHDLQQRVENLLNLC-----CS 835
Query: 205 RALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDE 264
AL + + +LH S A D+ + M L++ ++ G
Sbjct: 836 SALPGGGTNSEFALH-SLFEAKGDVMVALEMLLLRKPVRLKCHPLANYHYAGS------- 887
Query: 265 MEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYIQQKRLKA 324
++W++ E LF +AL Y KDF + Q + K++A V++YY WK R ++ R +
Sbjct: 888 -DKWTSLERKLFNKALATYSKDFIFV-QKMVKSKTVAQCVEYYYTWKKIMRLGRKHRTRL 945
Query: 325 AE 326
AE
Sbjct: 946 AE 947
>gi|210031154 zinc finger protein 541 [Homo sapiens]
Length = 1365
Score = 41.6 bits (96), Expect = 0.002
Identities = 56/258 (21%), Positives = 107/258 (41%), Gaps = 43/258 (16%)
Query: 106 CSVTLLNETD-ILSQYLEKEDCFFYSLVFDPVQKTLLADQGEIRVGCKYQAEIPDRLVEG 164
CS + D ++S L++ D F V T ++ + I +G ++QAEIP+ ++
Sbjct: 1034 CSTSTQASPDQLISSMLDQVDGSFGICVVK--DDTKISIEPHINIGSRFQAEIPE--LQE 1089
Query: 165 ESDNRNQQKMEMKVWDP--DNPLTDRQIDQFLVVARAVGTFARALDCSSSIRQPSLHMSA 222
S + + VW P D ++ D+ + CSS + ++
Sbjct: 1090 RSLAGTDEHVASLVWKPWGDMMISSETQDRVTELCNVA--------CSSVMPGGGTNLEL 1141
Query: 223 AAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVLCRDEM---------EEWSASEA 273
A H + Q N + A+ TL+ +G P R + + W+ E
Sbjct: 1142 A--------LHCLHEAQGN---VQVALETLLLRG-PHKPRTHLLADYRYTGSDVWTPIEK 1189
Query: 274 MLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYI------QQKRLKAAEA 327
LF++A + KDF I + + K++A V++YY+WK ++ +KR+K
Sbjct: 1190 RLFKKAFYAHKKDFYLIHK-MIQTKTVAQCVEYYYIWKKMIKFDCGRAPGLEKRVKREPE 1248
Query: 328 DSKLKQVYIPTYTKPNPN 345
+ + + +P + P+
Sbjct: 1249 EVERTEEKVPCSPRERPS 1266
>gi|112807226 hypothetical protein LOC91748 [Homo sapiens]
Length = 1045
Score = 39.3 bits (90), Expect = 0.012
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 44/191 (23%)
Query: 137 QKTLLADQGEIRVGCKYQAEIP---DRLVEGESDNRNQQKMEMKVWDPDNPLTD-----R 188
+ T ++ + I VG ++QAEIP DR + ++ VW P L R
Sbjct: 713 EATPVSIEPRINVGSRFQAEIPLMRDRALAAADPHKADL-----VWQPWEDLESSREKQR 767
Query: 189 QIDQFLVVARAVGTFARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKA 248
Q++ L A CSS A ++++ A+ L + D+ +
Sbjct: 768 QVEDLLTAA-----------CSSIF-------PGAGTNQEL----ALHCLHESRGDILET 805
Query: 249 MSTLV------PQGGPVLCRDEM--EEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSL 300
++ L+ P P+ ++W +E LF + + Y KDF + Q + K++
Sbjct: 806 LNKLLLKKPLRPHNHPLATYHYTGSDQWKMAERKLFNKGIAIYKKDF-FLVQKLIQTKTV 864
Query: 301 ASIVQFYYMWK 311
A V+FYY +K
Sbjct: 865 AQCVEFYYTYK 875
>gi|44890062 hypothetical protein LOC91748 [Homo sapiens]
Length = 1045
Score = 39.3 bits (90), Expect = 0.012
Identities = 45/191 (23%), Positives = 79/191 (41%), Gaps = 44/191 (23%)
Query: 137 QKTLLADQGEIRVGCKYQAEIP---DRLVEGESDNRNQQKMEMKVWDPDNPLTD-----R 188
+ T ++ + I VG ++QAEIP DR + ++ VW P L R
Sbjct: 713 EATPVSIEPRINVGSRFQAEIPLMRDRALAAADPHKADL-----VWQPWEDLESSREKQR 767
Query: 189 QIDQFLVVARAVGTFARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKA 248
Q++ L A CSS A ++++ A+ L + D+ +
Sbjct: 768 QVEDLLTAA-----------CSSIF-------PGAGTNQEL----ALHCLHESRGDILET 805
Query: 249 MSTLV------PQGGPVLCRDEM--EEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSL 300
++ L+ P P+ ++W +E LF + + Y KDF + Q + K++
Sbjct: 806 LNKLLLKKPLRPHNHPLATYHYTGSDQWKMAERKLFNKGIAIYKKDF-FLVQKLIQTKTV 864
Query: 301 ASIVQFYYMWK 311
A V+FYY +K
Sbjct: 865 AQCVEFYYTYK 875
>gi|169204926 PREDICTED: similar to hCG2041217 [Homo sapiens]
Length = 266
Score = 38.5 bits (88), Expect = 0.020
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 147 IRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVA 197
+RVG YQA IP+ E + N++ + VW P++ ++D ++D+++V+A
Sbjct: 2 VRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMA 52
>gi|169205586 PREDICTED: similar to hCG2041217 [Homo sapiens]
Length = 266
Score = 38.5 bits (88), Expect = 0.020
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 147 IRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVA 197
+RVG YQA IP+ E + N++ + VW P++ ++D ++D+++V+A
Sbjct: 2 VRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMA 52
>gi|169203873 PREDICTED: similar to REST corepressor 2 [Homo
sapiens]
Length = 266
Score = 38.5 bits (88), Expect = 0.020
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 147 IRVGCKYQAEIPDRLVEGESDNRNQQKMEMKVWDPDNPLTDRQIDQFLVVA 197
+RVG YQA IP+ E + N++ + VW P++ ++D ++D+++V+A
Sbjct: 2 VRVGTNYQAIIPECKPESLARYSNKKLKGVLVWSPNHCVSDAKLDKYIVMA 52
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,069,428
Number of Sequences: 37866
Number of extensions: 1214761
Number of successful extensions: 4697
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 4529
Number of HSP's gapped (non-prelim): 192
length of query: 668
length of database: 18,247,518
effective HSP length: 109
effective length of query: 559
effective length of database: 14,120,124
effective search space: 7893149316
effective search space used: 7893149316
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.