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Search of human proteins with 13994236
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13994236 cat eye syndrome chromosome region, candidate 6
isoform a [Homo sapiens]
(578 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13994236 cat eye syndrome chromosome region, candidate 6 isof... 1181 0.0
gi|251823730 cat eye syndrome chromosome region, candidate 6 iso... 456 e-128
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 54 3e-07
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 54 4e-07
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 54 4e-07
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 51 3e-06
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 51 3e-06
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 51 3e-06
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 51 3e-06
gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H... 51 3e-06
gi|109255251 loricrin [Homo sapiens] 49 1e-05
gi|25777645 small conductance calcium-activated potassium channe... 49 1e-05
gi|194363768 homeobox D9 [Homo sapiens] 48 2e-05
gi|54607124 RNA binding motif protein 15B [Homo sapiens] 48 2e-05
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 48 3e-05
gi|39812496 Sp8 transcription factor isoform 1 [Homo sapiens] 47 4e-05
gi|39812501 Sp8 transcription factor isoform 2 [Homo sapiens] 47 4e-05
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 47 4e-05
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 47 4e-05
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 47 4e-05
gi|57864582 hornerin [Homo sapiens] 46 8e-05
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 46 8e-05
gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo sap... 46 8e-05
gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo sap... 46 8e-05
gi|60593038 keratin associated protein 5-4 [Homo sapiens] 46 8e-05
gi|186928829 dermokine isoform 4 precursor [Homo sapiens] 45 1e-04
gi|186928827 dermokine isoform 5 precursor [Homo sapiens] 45 1e-04
gi|186928825 dermokine isoform 3 precursor [Homo sapiens] 45 1e-04
gi|33504489 dermokine isoform 2 precursor [Homo sapiens] 45 1e-04
gi|118766339 thyroid transcription factor 1 isoform 1 [Homo sapi... 45 2e-04
>gi|13994236 cat eye syndrome chromosome region, candidate 6 isoform
a [Homo sapiens]
Length = 578
Score = 1181 bits (3056), Expect = 0.0
Identities = 578/578 (100%), Positives = 578/578 (100%)
Query: 1 MRPALGHPRSVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGR 60
MRPALGHPRSVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGR
Sbjct: 1 MRPALGHPRSVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGR 60
Query: 61 RGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATS 120
RGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATS
Sbjct: 61 RGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATS 120
Query: 121 SSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCPCCCCCGCPDR 180
SSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCPCCCCCGCPDR
Sbjct: 121 SSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCPCCCCCGCPDR 180
Query: 181 PGRRGRRRGCAPSPRCRWGYQALSVVLLLAQGGLLDLYLIAVTDLYWCSWIATDLVVVVG 240
PGRRGRRRGCAPSPRCRWGYQALSVVLLLAQGGLLDLYLIAVTDLYWCSWIATDLVVVVG
Sbjct: 181 PGRRGRRRGCAPSPRCRWGYQALSVVLLLAQGGLLDLYLIAVTDLYWCSWIATDLVVVVG 240
Query: 241 WAIFFAKNSRGRRGGAASGAHNHHLHHHHAAPPLHLPAPSAATAGAKARGARGGAGGAGG 300
WAIFFAKNSRGRRGGAASGAHNHHLHHHHAAPPLHLPAPSAATAGAKARGARGGAGGAGG
Sbjct: 241 WAIFFAKNSRGRRGGAASGAHNHHLHHHHAAPPLHLPAPSAATAGAKARGARGGAGGAGG 300
Query: 301 GLGAAAAAGEFAFAYLAWLIYSIAFTPKVVLILGTSILDLIELRAPFGTTGFRLTMALSV 360
GLGAAAAAGEFAFAYLAWLIYSIAFTPKVVLILGTSILDLIELRAPFGTTGFRLTMALSV
Sbjct: 301 GLGAAAAAGEFAFAYLAWLIYSIAFTPKVVLILGTSILDLIELRAPFGTTGFRLTMALSV 360
Query: 361 PLLYSLVRAISEAGAPPGSAGPLLLQPQRHRAAGCFLGTCLDLLDSFTLVELMLEGRVPL 420
PLLYSLVRAISEAGAPPGSAGPLLLQPQRHRAAGCFLGTCLDLLDSFTLVELMLEGRVPL
Sbjct: 361 PLLYSLVRAISEAGAPPGSAGPLLLQPQRHRAAGCFLGTCLDLLDSFTLVELMLEGRVPL 420
Query: 421 PAHLRYLLIAVYFLTLASPVLWLYELNAAAAAAASWGQASGPGSCSRLLRLLGGCLVDVP 480
PAHLRYLLIAVYFLTLASPVLWLYELNAAAAAAASWGQASGPGSCSRLLRLLGGCLVDVP
Sbjct: 421 PAHLRYLLIAVYFLTLASPVLWLYELNAAAAAAASWGQASGPGSCSRLLRLLGGCLVDVP 480
Query: 481 LLALRCLLVVSYQQPLSIFMLKNLFFLGCRGLEALEGCWDRGNRASPSRARGGYGAPPSA 540
LLALRCLLVVSYQQPLSIFMLKNLFFLGCRGLEALEGCWDRGNRASPSRARGGYGAPPSA
Sbjct: 481 LLALRCLLVVSYQQPLSIFMLKNLFFLGCRGLEALEGCWDRGNRASPSRARGGYGAPPSA 540
Query: 541 PPPPPPPPQGGSQLGHCISENEGGAHGYVNTLAVASQN 578
PPPPPPPPQGGSQLGHCISENEGGAHGYVNTLAVASQN
Sbjct: 541 PPPPPPPPQGGSQLGHCISENEGGAHGYVNTLAVASQN 578
>gi|251823730 cat eye syndrome chromosome region, candidate 6
isoform b [Homo sapiens]
Length = 223
Score = 456 bits (1173), Expect = e-128
Identities = 223/223 (100%), Positives = 223/223 (100%)
Query: 356 MALSVPLLYSLVRAISEAGAPPGSAGPLLLQPQRHRAAGCFLGTCLDLLDSFTLVELMLE 415
MALSVPLLYSLVRAISEAGAPPGSAGPLLLQPQRHRAAGCFLGTCLDLLDSFTLVELMLE
Sbjct: 1 MALSVPLLYSLVRAISEAGAPPGSAGPLLLQPQRHRAAGCFLGTCLDLLDSFTLVELMLE 60
Query: 416 GRVPLPAHLRYLLIAVYFLTLASPVLWLYELNAAAAAAASWGQASGPGSCSRLLRLLGGC 475
GRVPLPAHLRYLLIAVYFLTLASPVLWLYELNAAAAAAASWGQASGPGSCSRLLRLLGGC
Sbjct: 61 GRVPLPAHLRYLLIAVYFLTLASPVLWLYELNAAAAAAASWGQASGPGSCSRLLRLLGGC 120
Query: 476 LVDVPLLALRCLLVVSYQQPLSIFMLKNLFFLGCRGLEALEGCWDRGNRASPSRARGGYG 535
LVDVPLLALRCLLVVSYQQPLSIFMLKNLFFLGCRGLEALEGCWDRGNRASPSRARGGYG
Sbjct: 121 LVDVPLLALRCLLVVSYQQPLSIFMLKNLFFLGCRGLEALEGCWDRGNRASPSRARGGYG 180
Query: 536 APPSAPPPPPPPPQGGSQLGHCISENEGGAHGYVNTLAVASQN 578
APPSAPPPPPPPPQGGSQLGHCISENEGGAHGYVNTLAVASQN
Sbjct: 181 APPSAPPPPPPPPQGGSQLGHCISENEGGAHGYVNTLAVASQN 223
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 54.3 bits (129), Expect = 3e-07
Identities = 63/194 (32%), Positives = 72/194 (37%), Gaps = 60/194 (30%)
Query: 10 SVSSASGSFPP--PPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRG----- 62
S SS G F P P A L P GG G GSG GGGGG G
Sbjct: 57 SSSSPLGCFEPADPEGAGLLLPP--PGGGGGGSAGSG----------GGGGGGVGVPGLL 104
Query: 63 ----GGGGSPS------------------------SSTGAEREDDDESLSVSKPLVPNAA 94
G GG PS S+G E+ DD+S + LV A
Sbjct: 105 VGSAGVGGDPSLSSLPAGAALCLKYGESASRGSVAESSGGEQSPDDDSDGRCE-LVLRAG 163
Query: 95 LLGPPAQVGAPAGPAPVAFS-SSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRS 153
+ P A GA G A A S+A S P GG G GG S S
Sbjct: 164 VADPRASPGAGGGGAKAAEGCSNAHLHGGASVPP-----------GGLGGGGGGGSSSGS 212
Query: 154 AGGAGGTGTGSGAS 167
+GG GG+G+GSG S
Sbjct: 213 SGGGGGSGSGSGGS 226
Score = 45.1 bits (105), Expect = 2e-04
Identities = 68/239 (28%), Positives = 87/239 (36%), Gaps = 24/239 (10%)
Query: 74 AEREDD---DESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSC 130
A EDD +SLS S AA P + P P +SS+S+P C
Sbjct: 11 AAGEDDLFLHKSLSASTSKRLEAAFRSTPPGMDLSLAPPP-----RERPASSSSSPLG-C 64
Query: 131 SMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCPCCCCCGCPDRPGRRGRRRGC 190
A G G GG G SAG GG G G G G P G
Sbjct: 65 FEPADPEGAGLLLPPPGGGGGGSAGSGGGGGGGVGVPGL-LVGSAGVGGDPSLSSLPAGA 123
Query: 191 APSPRCRWGYQALSVVLLLAQGGLLDLYLIAVTDLYWCSWIATDLVVVVGWAIFFAKNSR 250
A ++G A + + GG D S +LV+ G A A
Sbjct: 124 ALC--LKYGESASRGSVAESSGGEQS----PDDD----SDGRCELVLRAGVADPRASPGA 173
Query: 251 GRRGG-AASGAHNHHLHHHHAAPPLHLPAPSAATAGAKARGARGGAGGAGGGLGAAAAA 308
G G AA G N HLH + PP L G + G+ GG GG+G G G ++++
Sbjct: 174 GGGGAKAAEGCSNAHLHGGASVPPGGL---GGGGGGGSSSGSSGGGGGSGSGSGGSSSS 229
Score = 42.4 bits (98), Expect = 0.001
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 1 MRPALGHPRSVSSASGSFPPPPAAARLQPLFLRGGSF--RGRRGSGDSSTSTSTSRGGGG 58
+R + PR+ A G AA L GG+ G G G S+S S GGGG
Sbjct: 160 LRAGVADPRASPGAGGG--GAKAAEGCSNAHLHGGASVPPGGLGGGGGGGSSSGSSGGGG 217
Query: 59 GRRGGGGGSPSSSTGAEREDDDE 81
G G GGS SSS+ + ++ ++
Sbjct: 218 GSGSGSGGSSSSSSSSSKKSKEQ 240
Score = 39.7 bits (91), Expect = 0.008
Identities = 48/160 (30%), Positives = 58/160 (36%), Gaps = 18/160 (11%)
Query: 19 PPP---PAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGG--GRRGGGGGS---PSS 70
PPP PA++ PL G F G GGGG G GGGGG P
Sbjct: 48 PPPRERPASSSSSPL----GCFEPADPEGAGLLLPPPGGGGGGSAGSGGGGGGGVGVPGL 103
Query: 71 STGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSC 130
G+ D SLS L AAL + G A VA SS S +
Sbjct: 104 LVGSAGVGGDPSLS---SLPAGAALC---LKYGESASRGSVAESSGGEQSPDDDSDGRCE 157
Query: 131 SMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCP 170
+ A A+ GG G+++A G GAS P
Sbjct: 158 LVLRAGVADPRASPGAGGGGAKAAEGCSNAHLHGGASVPP 197
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 53.9 bits (128), Expect = 4e-07
Identities = 27/54 (50%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 256 AASGAHNHHLHHHHAAPPLHLPAPSAATAGAKARGARGGAGGAGGGLGAAAAAG 309
+ +G H HH HHHHAA H P A A A + GGAGGAGGG A+A G
Sbjct: 175 SGAGPHYHH-HHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGG 227
Score = 40.8 bits (94), Expect = 0.003
Identities = 42/164 (25%), Positives = 58/164 (35%), Gaps = 22/164 (13%)
Query: 6 GHPRSVSSASGSFPPPPAAARL--QPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRGG 63
G+P+ ++ + F P A L L+GG RG+ + + G G G G
Sbjct: 96 GYPQQLNPEALGFSPEDAVEALISNSHQLQGGFDGYARGA----QQLAAAAGAGAGASLG 151
Query: 64 GGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSST 123
G G A V +A + AQ GA ++ T
Sbjct: 152 GSGEEMGPAAA---------------VVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPT 196
Query: 124 STPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGAS 167
+ + AA GG AG GGP S GG GG G G G +
Sbjct: 197 AGAPGAAGSAAASAGGAGGAGG-GGPASAGGGGGGGGGGGGGGA 239
Score = 33.1 bits (74), Expect = 0.72
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 34 GGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTG 73
G + G+G + S GGGGG GGGGG ++ G
Sbjct: 204 GSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAG 243
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 53.9 bits (128), Expect = 4e-07
Identities = 27/54 (50%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 256 AASGAHNHHLHHHHAAPPLHLPAPSAATAGAKARGARGGAGGAGGGLGAAAAAG 309
+ +G H HH HHHHAA H P A A A + GGAGGAGGG A+A G
Sbjct: 175 SGAGPHYHH-HHHHAAGHHHHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGG 227
Score = 40.8 bits (94), Expect = 0.003
Identities = 42/164 (25%), Positives = 58/164 (35%), Gaps = 22/164 (13%)
Query: 6 GHPRSVSSASGSFPPPPAAARL--QPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRGG 63
G+P+ ++ + F P A L L+GG RG+ + + G G G G
Sbjct: 96 GYPQQLNPEALGFSPEDAVEALISNSHQLQGGFDGYARGA----QQLAAAAGAGAGASLG 151
Query: 64 GGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSST 123
G G A V +A + AQ GA ++ T
Sbjct: 152 GSGEEMGPAAA---------------VVSAVIAAAAAQSGAGPHYHHHHHHAAGHHHHPT 196
Query: 124 STPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGAS 167
+ + AA GG AG GGP S GG GG G G G +
Sbjct: 197 AGAPGAAGSAAASAGGAGGAGG-GGPASAGGGGGGGGGGGGGGA 239
Score = 33.1 bits (74), Expect = 0.72
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 34 GGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTG 73
G + G+G + S GGGGG GGGGG ++ G
Sbjct: 204 GSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAG 243
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 50.8 bits (120), Expect = 3e-06
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 18/106 (16%)
Query: 83 LSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSS--------STSTPT------- 127
++V L+P L+ P + A + S+S+ATSS ++S PT
Sbjct: 1 MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPI 60
Query: 128 ---SSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCP 170
++ + T GGG G GG G S G GG G G G++C P
Sbjct: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNP 106
Score = 48.1 bits (113), Expect = 2e-05
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 6 GHPRSVSSASGSFPP---PPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRG 62
G S SSA+ S P PPA++ P R + ++T TST GGGGG G
Sbjct: 28 GTTTSTSSATSSPAPSIGPPASSG--PTLFRPEPIASAAAA--AATVTSTGGGGGGGGSG 83
Query: 63 GGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPA-PVAFSSSAATSS 121
GGGGS + G + + + N + G + A G A ++S +SS
Sbjct: 84 GGGGSSGNGGGGGGGGGGSNCNPNLAAASNGS-GGGGGGISAGGGVASSTPINASTGSSS 142
Query: 122 STSTPTSSCSMTAADFGGGAAAGAVGG 148
S+S+ +SS S +++ ++ G + G
Sbjct: 143 SSSSSSSSSSSSSSSSSSSSSCGPLPG 169
Score = 41.6 bits (96), Expect = 0.002
Identities = 39/131 (29%), Positives = 54/131 (41%), Gaps = 11/131 (8%)
Query: 3 PALGHPRSVSSASGSFPPPP---AAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGG 59
P++G P SS F P P AAA + GG G GSG S+ GGGGG
Sbjct: 42 PSIGPP--ASSGPTLFRPEPIASAAAAAATVTSTGGG-GGGGGSGGGGGSSGNGGGGGGG 98
Query: 60 RRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAAT 119
GGG + A +S P + + + SSS+++
Sbjct: 99 --GGGSNCNPNLAAASNGSGGGGGGIS---AGGGVASSTPINASTGSSSSSSSSSSSSSS 153
Query: 120 SSSTSTPTSSC 130
SSS+S+ +SSC
Sbjct: 154 SSSSSSSSSSC 164
Score = 33.9 bits (76), Expect = 0.42
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 17/87 (19%)
Query: 92 NAALLGPPAQVGAPAGPAPVAFS----SSAATSSSTSTPTSSCSMTAADFGGGAAAGAVG 147
++A P +G PA P F +SAA +++T T T GGG ++G G
Sbjct: 34 SSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGG 93
Query: 148 GPG-------------SRSAGGAGGTG 161
G G + S G GG G
Sbjct: 94 GGGGGGGGSNCNPNLAAASNGSGGGGG 120
Score = 33.1 bits (74), Expect = 0.72
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 270 AAPPLHLPAPSAATAGAKAR----GARGGAGGAGGGLGAAAAAG 309
+ P L P P A+ A A A G GG GG+GGG G++ G
Sbjct: 50 SGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGG 93
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 50.8 bits (120), Expect = 3e-06
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 18/106 (16%)
Query: 83 LSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSS--------STSTPT------- 127
++V L+P L+ P + A + S+S+ATSS ++S PT
Sbjct: 1 MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPI 60
Query: 128 ---SSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCP 170
++ + T GGG G GG G S G GG G G G++C P
Sbjct: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNP 106
Score = 48.1 bits (113), Expect = 2e-05
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 6 GHPRSVSSASGSFPP---PPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRG 62
G S SSA+ S P PPA++ P R + ++T TST GGGGG G
Sbjct: 28 GTTTSTSSATSSPAPSIGPPASSG--PTLFRPEPIASAAAA--AATVTSTGGGGGGGGSG 83
Query: 63 GGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPA-PVAFSSSAATSS 121
GGGGS + G + + + N + G + A G A ++S +SS
Sbjct: 84 GGGGSSGNGGGGGGGGGGSNCNPNLAAASNGS-GGGGGGISAGGGVASSTPINASTGSSS 142
Query: 122 STSTPTSSCSMTAADFGGGAAAGAVGG 148
S+S+ +SS S +++ ++ G + G
Sbjct: 143 SSSSSSSSSSSSSSSSSSSSSCGPLPG 169
Score = 41.6 bits (96), Expect = 0.002
Identities = 39/131 (29%), Positives = 54/131 (41%), Gaps = 11/131 (8%)
Query: 3 PALGHPRSVSSASGSFPPPP---AAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGG 59
P++G P SS F P P AAA + GG G GSG S+ GGGGG
Sbjct: 42 PSIGPP--ASSGPTLFRPEPIASAAAAAATVTSTGGG-GGGGGSGGGGGSSGNGGGGGGG 98
Query: 60 RRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAAT 119
GGG + A +S P + + + SSS+++
Sbjct: 99 --GGGSNCNPNLAAASNGSGGGGGGIS---AGGGVASSTPINASTGSSSSSSSSSSSSSS 153
Query: 120 SSSTSTPTSSC 130
SSS+S+ +SSC
Sbjct: 154 SSSSSSSSSSC 164
Score = 33.9 bits (76), Expect = 0.42
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 17/87 (19%)
Query: 92 NAALLGPPAQVGAPAGPAPVAFS----SSAATSSSTSTPTSSCSMTAADFGGGAAAGAVG 147
++A P +G PA P F +SAA +++T T T GGG ++G G
Sbjct: 34 SSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGG 93
Query: 148 GPG-------------SRSAGGAGGTG 161
G G + S G GG G
Sbjct: 94 GGGGGGGGSNCNPNLAAASNGSGGGGG 120
Score = 33.1 bits (74), Expect = 0.72
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 270 AAPPLHLPAPSAATAGAKAR----GARGGAGGAGGGLGAAAAAG 309
+ P L P P A+ A A A G GG GG+GGG G++ G
Sbjct: 50 SGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGG 93
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 50.8 bits (120), Expect = 3e-06
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 18/106 (16%)
Query: 83 LSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSS--------STSTPT------- 127
++V L+P L+ P + A + S+S+ATSS ++S PT
Sbjct: 1 MAVPAALIPPTQLVPPQPPISTSASSSGTTTSTSSATSSPAPSIGPPASSGPTLFRPEPI 60
Query: 128 ---SSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCP 170
++ + T GGG G GG G S G GG G G G++C P
Sbjct: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNP 106
Score = 48.1 bits (113), Expect = 2e-05
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 9/147 (6%)
Query: 6 GHPRSVSSASGSFPP---PPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRG 62
G S SSA+ S P PPA++ P R + ++T TST GGGGG G
Sbjct: 28 GTTTSTSSATSSPAPSIGPPASSG--PTLFRPEPIASAAAA--AATVTSTGGGGGGGGSG 83
Query: 63 GGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPA-PVAFSSSAATSS 121
GGGGS + G + + + N + G + A G A ++S +SS
Sbjct: 84 GGGGSSGNGGGGGGGGGGSNCNPNLAAASNGS-GGGGGGISAGGGVASSTPINASTGSSS 142
Query: 122 STSTPTSSCSMTAADFGGGAAAGAVGG 148
S+S+ +SS S +++ ++ G + G
Sbjct: 143 SSSSSSSSSSSSSSSSSSSSSCGPLPG 169
Score = 41.6 bits (96), Expect = 0.002
Identities = 39/131 (29%), Positives = 54/131 (41%), Gaps = 11/131 (8%)
Query: 3 PALGHPRSVSSASGSFPPPP---AAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGG 59
P++G P SS F P P AAA + GG G GSG S+ GGGGG
Sbjct: 42 PSIGPP--ASSGPTLFRPEPIASAAAAAATVTSTGGG-GGGGGSGGGGGSSGNGGGGGGG 98
Query: 60 RRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAAT 119
GGG + A +S P + + + SSS+++
Sbjct: 99 --GGGSNCNPNLAAASNGSGGGGGGIS---AGGGVASSTPINASTGSSSSSSSSSSSSSS 153
Query: 120 SSSTSTPTSSC 130
SSS+S+ +SSC
Sbjct: 154 SSSSSSSSSSC 164
Score = 33.9 bits (76), Expect = 0.42
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 17/87 (19%)
Query: 92 NAALLGPPAQVGAPAGPAPVAFS----SSAATSSSTSTPTSSCSMTAADFGGGAAAGAVG 147
++A P +G PA P F +SAA +++T T T GGG ++G G
Sbjct: 34 SSATSSPAPSIGPPASSGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGG 93
Query: 148 GPG-------------SRSAGGAGGTG 161
G G + S G GG G
Sbjct: 94 GGGGGGGGSNCNPNLAAASNGSGGGGG 120
Score = 33.1 bits (74), Expect = 0.72
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 270 AAPPLHLPAPSAATAGAKAR----GARGGAGGAGGGLGAAAAAG 309
+ P L P P A+ A A A G GG GG+GGG G++ G
Sbjct: 50 SGPTLFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGG 93
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 50.8 bits (120), Expect = 3e-06
Identities = 49/180 (27%), Positives = 74/180 (41%), Gaps = 28/180 (15%)
Query: 3 PALGHPRS---VSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGG 59
PA G P S AS P A A LQP + RR S SS+S+S+S
Sbjct: 2497 PAPGVPHSDVGEPPASTGAQQPSALAALQPA-------KERRSSSSSSSSSSSSSSSSSS 2549
Query: 60 RRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQV---------GAPAGPAP 110
S SSS+G+ D + S S P+ P AL P+ G P P P
Sbjct: 2550 ------SSSSSSSGSSSSDSEGS---SLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTP 2600
Query: 111 VAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCP 170
+++SSS+S+ +SS S +++ +++ + S S+ + + G P
Sbjct: 2601 AKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALP 2660
Score = 41.6 bits (96), Expect = 0.002
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 66 GSPSSSTGA------EREDDDESLSVSKPLVPNAALLGPPAQVGA--PAG-----PAPVA 112
GS S S+GA D + LSV P VP++ + PPA GA P+ PA
Sbjct: 2471 GSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKER 2530
Query: 113 FSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVG 147
SSS+++SSS+S+ +SS S +++ G +++ + G
Sbjct: 2531 RSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEG 2565
Score = 31.6 bits (70), Expect = 2.1
Identities = 27/92 (29%), Positives = 34/92 (36%), Gaps = 16/92 (17%)
Query: 19 PPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAERED 78
PP P A+ R RR S SS+S+S+S S SSS+ +
Sbjct: 2595 PPEPTPAK-----------RKRRSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2641
Query: 79 DDESLSVSKPLVPNAALLGPPAQVGAPAGPAP 110
S S P P L PA +P P P
Sbjct: 2642 SSSSSSSPSPAKPGPQALPKPA---SPKKPPP 2670
Score = 29.6 bits (65), Expect = 7.9
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 15/108 (13%)
Query: 67 SPSSSTGAEREDDDESLSVSKPL--VPNAALLGPPAQVGAPAGPAPVAFSSS-------- 116
+P S+ R + + S S + P+ +LL PPAQ P P P AFS
Sbjct: 2409 TPPSAPSQSRMTSERAPSPSSRMGQAPSQSLL-PPAQ-DQPRSPVPSAFSDQSRCLIAQT 2466
Query: 117 ---AATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTG 161
A + S +S ++ + +A D G + A G P S TG
Sbjct: 2467 TPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTG 2514
>gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo
sapiens]
Length = 425
Score = 50.8 bits (120), Expect = 3e-06
Identities = 45/129 (34%), Positives = 55/129 (42%), Gaps = 20/129 (15%)
Query: 47 STSTSTSRGGGGGRRGGGGGS-----PSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQ 101
S S GGG G GG G S PS R S S S+P P++
Sbjct: 238 SRSDLLKAGGGAGGSGGSGPSAILRLPSYRFRYRRRSRSSSRS-SEP---------SPSR 287
Query: 102 VGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTA----ADFGGGAAAGAVGGPGSRSAGGA 157
+P GP F+S+ + + S S S+ A A GGG A GA GG AGG
Sbjct: 288 DASPGGPGGPGFASTDISMYTLSRDPSKGSVAAGLAGAGGGGGGAVGAFGGAAG-GAGGG 346
Query: 158 GGTGTGSGA 166
GG G G+GA
Sbjct: 347 GGGGGGAGA 355
Score = 38.5 bits (88), Expect = 0.017
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 13/104 (12%)
Query: 33 RGGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDES--LSVSKPLV 90
+G G G+G + GG G GGGGG GAER+ S L++
Sbjct: 315 KGSVAAGLAGAGGGGGGAVGAFGGAAGGAGGGGGG-GGGAGAERDRGGASGFLTLHNAFP 373
Query: 91 PNA------ALLGPPAQVG----APAGPAPVAFSSSAATSSSTS 124
A + GPPA AP+ PAP + AA S++ +
Sbjct: 374 KEAGGGVTVTVTGPPAPPAPAPPAPSAPAPGTLAKEAAASNTNT 417
Score = 29.6 bits (65), Expect = 7.9
Identities = 13/18 (72%), Positives = 13/18 (72%)
Query: 290 GARGGAGGAGGGLGAAAA 307
GA GGAGG GGG G A A
Sbjct: 338 GAAGGAGGGGGGGGGAGA 355
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 49.3 bits (116), Expect = 1e-05
Identities = 67/287 (23%), Positives = 90/287 (31%), Gaps = 76/287 (26%)
Query: 34 GGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNA 93
G F G GSG S+ + GGGG GGG G SS G
Sbjct: 33 GCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGG------------------ 74
Query: 94 ALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRS 153
G G +G V +S +S S SS + F G + GG G S
Sbjct: 75 ---GGIGGCGGGSG-GSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFS 130
Query: 154 AGGAGGTGTGSG---------ASCCPCCCCCGCPDRPGRRGRRRGCAPSPRCRWGYQALS 204
+GG G +G GSG + C G G G GC S
Sbjct: 131 SGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSS----------- 179
Query: 205 VVLLLAQGGLLDLYLIAVTDLYWCSWIATDLVVVVGWAIFFAKNSRGRRGGAASGAHNHH 264
GG G ++ G GG++ G+ + +
Sbjct: 180 -----GGGG--------------------------GSVCGYSGGGSGCGGGSSGGSGSGY 208
Query: 265 LHHHHAAPPLHLPAPSAATAGAKARGARGGAG--GAGGGLGAAAAAG 309
+ P PS G+ G GG+G +GGG G++ G
Sbjct: 209 VSSQQVTQTSCAPQPSYG-GGSSGGGGSGGSGCFSSGGGGGSSGCGG 254
Score = 47.4 bits (111), Expect = 4e-05
Identities = 46/153 (30%), Positives = 58/153 (37%), Gaps = 19/153 (12%)
Query: 34 GGSFRGRRGSGDS--STSTSTSRGGGGG--RRGGGGGSP------SSSTGAEREDDDESL 83
GG F G+ S S+ S GGG G GGGGGS S G S
Sbjct: 148 GGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSG 207
Query: 84 SVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGG--- 140
VS V + P+ G +G S SS +S C ++ G G
Sbjct: 208 YVSSQQVTQTSCAPQPSYGGGSSGGG--GSGGSGCFSSGGGGGSSGCGGGSSGIGSGCII 265
Query: 141 AAAGAVGGPGSRSAGGAG----GTGTGSGASCC 169
+ G+V G GS GG G G+G+G G C
Sbjct: 266 SGGGSVCGGGSSGGGGGGSSVGGSGSGKGVPIC 298
Score = 42.7 bits (99), Expect = 0.001
Identities = 45/145 (31%), Positives = 56/145 (38%), Gaps = 9/145 (6%)
Query: 31 FLRGGSFRGRRGSGDSSTSTSTSRGGGGGR-RGGGGGSPSSSTGAEREDDDESLSVSKPL 89
F GG GSG S+ S GGG G GGGG + + S S
Sbjct: 114 FSSGGGGSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGG 173
Query: 90 VPNAALLGPPAQV------GAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAA 143
+ G V G+ G S S SS T T SC+ + GG +
Sbjct: 174 SGCFSSGGGGGSVCGYSGGGSGCGGGSSGGSGSGYVSSQQVTQT-SCAPQPSYGGGSSGG 232
Query: 144 GAVGGPGSRSAGGAGG-TGTGSGAS 167
G GG G S+GG GG +G G G+S
Sbjct: 233 GGSGGSGCFSSGGGGGSSGCGGGSS 257
Score = 33.9 bits (76), Expect = 0.42
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 123 TSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASC 168
T P C T+ GGG G GG G GG G G SG+ C
Sbjct: 9 TPQPPVDCVKTS---GGGGGGGGSGGGGCGFFGGGGSGGGSSGSGC 51
Score = 32.7 bits (73), Expect = 0.94
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Query: 103 GAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGT 162
G +G F + +S S GGG G+ GG G GG GG G
Sbjct: 26 GGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGG---GGGIGGCGG 82
Query: 163 GSGAS 167
GSG S
Sbjct: 83 GSGGS 87
>gi|25777645 small conductance calcium-activated potassium channel
protein 2 isoform a [Homo sapiens]
Length = 579
Score = 48.9 bits (115), Expect = 1e-05
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 60 RRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAAT 119
R GG P S+ A R + E S ++PL PPA VG G + + +++AA
Sbjct: 5 RYNGGVMRPLSNLSASRRNLHEMDSEAQPL-------QPPASVGGGGGASSPSAAAAAAA 57
Query: 120 SSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGAS 167
+ S+S P S + A GG GS + GG GG G+G G+S
Sbjct: 58 AVSSSAPEIVVSKPEHNNSNNLALYGTGGGGS-TGGGGGGGGSGHGSS 104
Score = 33.5 bits (75), Expect = 0.55
Identities = 20/67 (29%), Positives = 28/67 (41%)
Query: 8 PRSVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGS 67
P SV G+ P AAA + + ++S + + GGGG GGGGG
Sbjct: 37 PASVGGGGGASSPSAAAAAAAAVSSSAPEIVVSKPEHNNSNNLALYGTGGGGSTGGGGGG 96
Query: 68 PSSSTGA 74
S G+
Sbjct: 97 GGSGHGS 103
>gi|194363768 homeobox D9 [Homo sapiens]
Length = 352
Score = 48.1 bits (113), Expect = 2e-05
Identities = 58/196 (29%), Positives = 72/196 (36%), Gaps = 38/196 (19%)
Query: 8 PRS-VSSASGSFPP--PPAAARLQPLF--------LRGGSFRGRRGSGDSSTSTSTSRGG 56
PRS V SAS S P PPAAA + L+ L + R GG
Sbjct: 70 PRSAVFSASWSAVPSQPPAAAAMSGLYHPYVPPPPLAASASEPGRYVRSWMEPLPGFPGG 129
Query: 57 GGGRRGGGGGSPSS--STGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFS 114
GG GGGGG P S G + + P APA + +
Sbjct: 130 AGGGGGGGGGGPGRGPSPGPSGPANGRHYGIK------------PETRAAPAPATAASTT 177
Query: 115 SSAATSSSTSTPTSSCSMTAADFGGGA------------AAGAVGGPGSRSA-GGAGGTG 161
SS++TS S+S+ + CS+ G AA A GG G + G A GTG
Sbjct: 178 SSSSTSLSSSSKRTECSVARESQGSSGPEFSCNSFLQEKAAAATGGTGPGAGIGAATGTG 237
Query: 162 TGSGASCCPCCCCCGC 177
S S C GC
Sbjct: 238 GSSEPSACSDHPIPGC 253
Score = 32.0 bits (71), Expect = 1.6
Identities = 34/117 (29%), Positives = 43/117 (36%), Gaps = 30/117 (25%)
Query: 210 AQG---GLLDLYLIAVTDLYWCSWIATDLVVVVGWAIFFAKNSRGRRGGAASGAHNHHLH 266
AQG G+ D + CS+ V W+ A S+ A SG L+
Sbjct: 45 AQGRPAGVADGPAATAAEFASCSFAPRSAVFSASWS---AVPSQPPAAAAMSG-----LY 96
Query: 267 HHHAAPPLHLPAPSAATAGAKAR--------------GARGGAGGAGGGLGAAAAAG 309
H + PP P AA+A R GA GG GG GGG G + G
Sbjct: 97 HPYVPPP-----PLAASASEPGRYVRSWMEPLPGFPGGAGGGGGGGGGGPGRGPSPG 148
>gi|54607124 RNA binding motif protein 15B [Homo sapiens]
Length = 890
Score = 48.1 bits (113), Expect = 2e-05
Identities = 45/130 (34%), Positives = 54/130 (41%), Gaps = 19/130 (14%)
Query: 6 GHPRSVSSASGSFPPP-PAAARLQPLFLR--GGSFRGRRGSGDSSTSTSTSRGGGGGRRG 62
G R+ ASG P PA AR +P GG R RG+GD++ S+ R G G G
Sbjct: 33 GGRRAAHKASGGAKHPVPARARDKPRGSGSGGGGHRDGRGTGDANHRASSGRSSGSGAGG 92
Query: 63 GG-GGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSS 121
GG GG S GA + P A+ L PP P G P SSAA
Sbjct: 93 GGRGGKASGDPGA------------SGMSPRASPLPPPP---PPPGAEPACPGSSAAAPE 137
Query: 122 STSTPTSSCS 131
+ SS S
Sbjct: 138 YKTLLISSLS 147
Score = 30.0 bits (66), Expect = 6.1
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 521 RGNRASPSRARGGYGAPPSAPPPPPPPPQGGSQ 553
RG +AS G G P A P PPPPP G++
Sbjct: 95 RGGKASGDP--GASGMSPRASPLPPPPPPPGAE 125
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 47.8 bits (112), Expect = 3e-05
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 98 PPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVG---GPGSRSA 154
PP V A P + S AA +++ + ++ +++A GGG+ +G G G GS S
Sbjct: 437 PPGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSG 496
Query: 155 GGAGGTGTGSGAS 167
GG GG G G G S
Sbjct: 497 GGGGGAGGGGGGS 509
Score = 43.1 bits (100), Expect = 7e-04
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 10 SVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPS 69
S ++A+ + AAA + + GGS G G+G S S S GGGGG GGGGGS
Sbjct: 454 SPAAAAAAAAAAAAAAAVSAVHRGGGS--GSGGAGGGSGGGSGSGGGGGGAGGGGGGSSG 511
Query: 70 SSTG 73
+G
Sbjct: 512 GGSG 515
Score = 42.0 bits (97), Expect = 0.002
Identities = 31/105 (29%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Query: 63 GGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSS 122
G SP++S+G E +S S +++ L P A A A A A S+
Sbjct: 421 GSESSPAASSGYESSTPPGLVSPSAE-PQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGGG 479
Query: 123 TSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGAS 167
+ + + GG GA GG G S GG+G G SG S
Sbjct: 480 SGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHSGLS 524
Score = 39.7 bits (91), Expect = 0.008
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 91 PNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPG 150
P + P A G + P S SA SS++ ++ + AA AA AV G
Sbjct: 419 PQGSESSPAASSGYESSTPPGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGG 478
Query: 151 SRSAGGA-GGTGTGSGA 166
+GGA GG+G GSG+
Sbjct: 479 GSGSGGAGGGSGGGSGS 495
Score = 38.1 bits (87), Expect = 0.022
Identities = 22/72 (30%), Positives = 27/72 (37%)
Query: 3 PALGHPRSVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRG 62
P L P + +S + P AAA RG G S GGG G G
Sbjct: 438 PGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGG 497
Query: 63 GGGGSPSSSTGA 74
GGGG+ G+
Sbjct: 498 GGGGAGGGGGGS 509
Score = 33.5 bits (75), Expect = 0.55
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 270 AAPPLHLPAPSAATAGAKARGARGGAGGAGGGLGAAAAAG 309
AA A +AA A RG G+GGAGGG G + +G
Sbjct: 457 AAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSG 496
Score = 30.4 bits (67), Expect = 4.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Query: 256 AASGAHNHHLHHHH 269
AA+ AH+HH HHHH
Sbjct: 226 AAAAAHHHHHHHHH 239
>gi|39812496 Sp8 transcription factor isoform 1 [Homo sapiens]
Length = 508
Score = 47.4 bits (111), Expect = 4e-05
Identities = 43/155 (27%), Positives = 64/155 (41%), Gaps = 18/155 (11%)
Query: 16 GSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTS------TSRGGGGGRRGGGGGSPS 69
GS P P++ G +R S SS S + +S G G R GG S +
Sbjct: 28 GSPSPSPSSLSDSSSSFGKGFHPWKRSSSSSSASCNVVGSSLSSFGVSGASRNGGSSSAA 87
Query: 70 SSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSS 129
++ A + + + LV ++ G G+P A SSSAA +++ + +S
Sbjct: 88 AAAAA-------AAAAAAALVSDSFSCG-----GSPGSSAFSLTSSSAAAAAAAAAAAAS 135
Query: 130 CSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGS 164
S A D+ A G GG G GG GG+ S
Sbjct: 136 SSPFANDYSVFQAPGVSGGSGGGGGGGGGGSSAHS 170
Score = 34.3 bits (77), Expect = 0.32
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Query: 91 PNAALLGPPAQVGAPAGPAPVAFSSSAAT--------SSSTSTPTSSCSMTAADFGGGAA 142
P A L ++G+P+ P+P + S S+++ S+S+ ++SC++ +
Sbjct: 16 PLAMLAATCNKIGSPS-PSPSSLSDSSSSFGKGFHPWKRSSSSSSASCNVVGSSLSSFGV 74
Query: 143 AGAVGGPGSRSAGGAGGTGTGSGASCCPCCCCCG 176
+GA GS SA A + A+ CG
Sbjct: 75 SGASRNGGSSSAAAAAAAAAAAAAALVSDSFSCG 108
Score = 29.6 bits (65), Expect = 7.9
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 47 STSTSTSRGGGGGRRGGGGGSPSSSTGAER--EDDDESLSVSKPLVPNAALLGPP 99
S T GGGGG GGS S +G ++ + D E + P + LL PP
Sbjct: 450 SKHVKTHSGGGGG-----GGSAGSGSGGKKGSDTDSEHSAAGSPPCHSPELLQPP 499
>gi|39812501 Sp8 transcription factor isoform 2 [Homo sapiens]
Length = 490
Score = 47.4 bits (111), Expect = 4e-05
Identities = 43/155 (27%), Positives = 64/155 (41%), Gaps = 18/155 (11%)
Query: 16 GSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTS------TSRGGGGGRRGGGGGSPS 69
GS P P++ G +R S SS S + +S G G R GG S +
Sbjct: 10 GSPSPSPSSLSDSSSSFGKGFHPWKRSSSSSSASCNVVGSSLSSFGVSGASRNGGSSSAA 69
Query: 70 SSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSS 129
++ A + + + LV ++ G G+P A SSSAA +++ + +S
Sbjct: 70 AAAAA-------AAAAAAALVSDSFSCG-----GSPGSSAFSLTSSSAAAAAAAAAAAAS 117
Query: 130 CSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGS 164
S A D+ A G GG G GG GG+ S
Sbjct: 118 SSPFANDYSVFQAPGVSGGSGGGGGGGGGGSSAHS 152
Score = 32.7 bits (73), Expect = 0.94
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 101 QVGAPAGPAPVAFSSSAAT--------SSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSR 152
++G+P+ P+P + S S+++ S+S+ ++SC++ + +GA GS
Sbjct: 8 KIGSPS-PSPSSLSDSSSSFGKGFHPWKRSSSSSSASCNVVGSSLSSFGVSGASRNGGSS 66
Query: 153 SAGGAGGTGTGSGASCCPCCCCCG 176
SA A + A+ CG
Sbjct: 67 SAAAAAAAAAAAAAALVSDSFSCG 90
Score = 29.6 bits (65), Expect = 7.9
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 47 STSTSTSRGGGGGRRGGGGGSPSSSTGAER--EDDDESLSVSKPLVPNAALLGPP 99
S T GGGGG GGS S +G ++ + D E + P + LL PP
Sbjct: 432 SKHVKTHSGGGGG-----GGSAGSGSGGKKGSDTDSEHSAAGSPPCHSPELLQPP 481
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 47.4 bits (111), Expect = 4e-05
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 12 SSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRG--------G 63
SS PP AAA L P G GR S ++ + + GG++ G
Sbjct: 128 SSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLAALQSG 187
Query: 64 GGGSPSSSTGAEREDDDESLSVSK--PLVPNAALLGPPA---QVGAPAGPAPVAFSSSAA 118
GGG G ++ D + PN + PPA + +P G P + +++AA
Sbjct: 188 GGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAA 247
Query: 119 TSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGG 156
S + ++S S +++ F GA+GG G +AGG
Sbjct: 248 GSKPPPSSSASASSSSSSF-AQQRFGAMGGGGPSAAGG 284
Score = 40.4 bits (93), Expect = 0.004
Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 31/163 (19%)
Query: 3 PALGHPRS-VSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGG---GG 58
P G P S ++A+GS PPP ++A + SS+S + R G GG
Sbjct: 234 PRGGTPGSGAAAAAGSKPPPSSSA----------------SASSSSSSFAQQRFGAMGGG 277
Query: 59 GRRGGGGGSPSSSTGAEREDDDESLSVSKPL--VPNAALLGPPAQVGAPAGPAPVAFSSS 116
G GGG+P + S S ++ P G P GA GPA +A
Sbjct: 278 GPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCW 337
Query: 117 AATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGG 159
A +++ + AA GGA + P S + G GG
Sbjct: 338 GAAAAAAA---------AAAASGGAQQRSHHAPMSPGSSGGGG 371
Score = 37.4 bits (85), Expect = 0.038
Identities = 42/166 (25%), Positives = 55/166 (33%), Gaps = 36/166 (21%)
Query: 11 VSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSS 70
+ +A+G PA QPL G + S GGGGG G GG P +
Sbjct: 50 MKAAAGQESEGPAVGPPQPL-------------GKELQDGAESNGGGGGGGAGSGGGPGA 96
Query: 71 STGAEREDDD---------------------ESLSVSKPLVPNAALLGPPAQ-VGAPAGP 108
+ + + S V P AA L PPA G P G
Sbjct: 97 EPDLKNSNGNAGPRPALNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGR 156
Query: 109 APVAF-SSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRS 153
+P A +++AA S + A GGG GP S
Sbjct: 157 SPSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNS 202
Score = 30.4 bits (67), Expect = 4.6
Identities = 40/161 (24%), Positives = 52/161 (32%), Gaps = 22/161 (13%)
Query: 12 SSASGSFPPPPAAARLQPLFLRGGSFRGRRG--SGDSSTSTSTSRGGGGGRRGGGGGSPS 69
S+A G P P A L L S RG +G GD S GG + GG G P+
Sbjct: 280 SAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYS---------GGPQDGGAGKGPA 330
Query: 70 SSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSS 129
+ + AA G Q A +P + + T P+S
Sbjct: 331 DMA-------SQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSP 383
Query: 130 C----SMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGA 166
M +GG GP S G G G G+
Sbjct: 384 MDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGS 424
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 47.4 bits (111), Expect = 4e-05
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 14/158 (8%)
Query: 12 SSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRG--------G 63
SS PP AAA L P G GR S ++ + + GG++ G
Sbjct: 128 SSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGLAALQSG 187
Query: 64 GGGSPSSSTGAEREDDDESLSVSK--PLVPNAALLGPPA---QVGAPAGPAPVAFSSSAA 118
GGG G ++ D + PN + PPA + +P G P + +++AA
Sbjct: 188 GGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAA 247
Query: 119 TSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGG 156
S + ++S S +++ F GA+GG G +AGG
Sbjct: 248 GSKPPPSSSASASSSSSSF-AQQRFGAMGGGGPSAAGG 284
Score = 40.4 bits (93), Expect = 0.004
Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 31/163 (19%)
Query: 3 PALGHPRS-VSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGG---GG 58
P G P S ++A+GS PPP ++A + SS+S + R G GG
Sbjct: 234 PRGGTPGSGAAAAAGSKPPPSSSA----------------SASSSSSSFAQQRFGAMGGG 277
Query: 59 GRRGGGGGSPSSSTGAEREDDDESLSVSKPL--VPNAALLGPPAQVGAPAGPAPVAFSSS 116
G GGG+P + S S ++ P G P GA GPA +A
Sbjct: 278 GPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPADMASQCW 337
Query: 117 AATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGG 159
A +++ + AA GGA + P S + G GG
Sbjct: 338 GAAAAAAA---------AAAASGGAQQRSHHAPMSPGSSGGGG 371
Score = 37.4 bits (85), Expect = 0.038
Identities = 42/166 (25%), Positives = 55/166 (33%), Gaps = 36/166 (21%)
Query: 11 VSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSS 70
+ +A+G PA QPL G + S GGGGG G GG P +
Sbjct: 50 MKAAAGQESEGPAVGPPQPL-------------GKELQDGAESNGGGGGGGAGSGGGPGA 96
Query: 71 STGAEREDDD---------------------ESLSVSKPLVPNAALLGPPAQ-VGAPAGP 108
+ + + S V P AA L PPA G P G
Sbjct: 97 EPDLKNSNGNAGPRPALNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGR 156
Query: 109 APVAF-SSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRS 153
+P A +++AA S + A GGG GP S
Sbjct: 157 SPSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNS 202
Score = 30.4 bits (67), Expect = 4.6
Identities = 40/161 (24%), Positives = 52/161 (32%), Gaps = 22/161 (13%)
Query: 12 SSASGSFPPPPAAARLQPLFLRGGSFRGRRG--SGDSSTSTSTSRGGGGGRRGGGGGSPS 69
S+A G P P A L L S RG +G GD S GG + GG G P+
Sbjct: 280 SAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYS---------GGPQDGGAGKGPA 330
Query: 70 SSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSS 129
+ + AA G Q A +P + + T P+S
Sbjct: 331 DMA-------SQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSP 383
Query: 130 C----SMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGA 166
M +GG GP S G G G G+
Sbjct: 384 MDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGS 424
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 47.4 bits (111), Expect = 4e-05
Identities = 47/157 (29%), Positives = 56/157 (35%), Gaps = 15/157 (9%)
Query: 34 GGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVS--KPL-- 89
GG G G G + GG G GG GG S G + V KP+
Sbjct: 15 GGRGSGCGGCGSGCGGCGSGCGGCGSGCGGCGGCGSGCAGCGGCGSGCCVPVCCCKPMCC 74
Query: 90 -VPNAALL-----GPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGG-GAA 142
VP + G + G+ G S A S S C GG G+
Sbjct: 75 CVPACSCSSCGKGGCGSCGGSKRGCVSCGVSKGACGSCGGSK--GGCGSCGGSKGGCGSC 132
Query: 143 AGAVGGPGS--RSAGGAGGTGTGSGASCCPCCCCCGC 177
G+ GG GS S GG G G + C PCCC GC
Sbjct: 133 GGSKGGCGSCGGSKGGCGSYGCSQSSCCKPCCCSSGC 169
Score = 30.8 bits (68), Expect = 3.6
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 139 GGAAAGAVGGPGSRSAG---GAGGTGTGSGASCCPCCCCCGC 177
GG +G GG GS G G GG G+G G C C GC
Sbjct: 8 GGCGSGC-GGRGSGCGGCGSGCGGCGSGCGGCGSGCGGCGGC 48
Score = 29.6 bits (65), Expect = 7.9
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 130 CSMTAADFGGGAAAGAVGGPGSRSAG-GAGGTGTGSGASCCPCC--CCCGC 177
CS GG +G GG GS G G+G G GSG C C C GC
Sbjct: 6 CSGGCGSGCGGRGSGC-GGCGSGCGGCGSGCGGCGSGCGGCGGCGSGCAGC 55
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 46.2 bits (108), Expect = 8e-05
Identities = 55/193 (28%), Positives = 69/193 (35%), Gaps = 44/193 (22%)
Query: 2 RPALGHPRSVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRR 61
R +LGH + S SG P P RGR GSG +S+ + G G G
Sbjct: 2401 RQSLGHGQH-GSGSGQSPSPS---------------RGRHGSGSGQSSSYSPYGSGSGWS 2444
Query: 62 GGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSS 121
G S S + ES S Q G+ +G SS+
Sbjct: 2445 SSRGPYESGSGHSSGLGHRESRSGQS---------SGYGQHGSSSG-----HSSTHGQHG 2490
Query: 122 STSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCPCCCCCGCPDRP 181
STS +SSC A G ++ G G GS + G G G+GSG S P
Sbjct: 2491 STSGQSSSCGQHGASSGQSSSHGQ-HGSGSSQSSGYGRQGSGSGQS-------------P 2536
Query: 182 GRRGRRRGCAPSP 194
G R G SP
Sbjct: 2537 GHGQRGSGSRQSP 2549
Score = 43.1 bits (100), Expect = 7e-04
Identities = 42/140 (30%), Positives = 56/140 (40%), Gaps = 13/140 (9%)
Query: 36 SFRGRRGSGDSSTSTSTSRGGGGGR-----RGGGGGSPSSSTGAEREDDDESLSVSKPLV 90
S RGR GSG + RG G G+ R G G SSS+G +S
Sbjct: 878 SGRGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQSSGFGHK-- 935
Query: 91 PNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPG 150
++ Q G+ +G SSS S S +S + G ++ G G G
Sbjct: 936 SSSGQSSGYTQHGSGSG-----HSSSYEQHGSRSGQSSRSEQHGSSSGSSSSYGQ-HGSG 989
Query: 151 SRSAGGAGGTGTGSGASCCP 170
SR + G G G+GSG S P
Sbjct: 990 SRQSLGHGQHGSGSGQSPSP 1009
Score = 43.1 bits (100), Expect = 7e-04
Identities = 54/193 (27%), Positives = 67/193 (34%), Gaps = 44/193 (22%)
Query: 2 RPALGHPRSVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRR 61
R +LGH + S SG P P RGR GSG +S+ G G G
Sbjct: 1931 RQSLGHGQH-GSGSGQSPSPS---------------RGRHGSGSGQSSSYGPYGSGSGWS 1974
Query: 62 GGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSS 121
G S S + ES S Q G+ +G SS+
Sbjct: 1975 SSRGPYESGSGHSSGLGHRESRSGQS---------SGYGQHGSSSG-----HSSTHGQHG 2020
Query: 122 STSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCPCCCCCGCPDRP 181
S S +SSC A G ++ G G GS + G G G+GSG S P
Sbjct: 2021 SASGQSSSCGQHGASSGQSSSHGQ-HGSGSSQSSGYGRQGSGSGQS-------------P 2066
Query: 182 GRRGRRRGCAPSP 194
G R G SP
Sbjct: 2067 GHGQRGSGSRQSP 2079
Score = 42.7 bits (99), Expect = 0.001
Identities = 51/189 (26%), Positives = 68/189 (35%), Gaps = 42/189 (22%)
Query: 34 GGSFRGRRGSGDSSTSTSTSRGGGGGRR--------GGGGGSPSSSTGAEREDDDESLSV 85
G S RG R S +S+S + G G R+ G G SPS S G +S S
Sbjct: 1435 GQSSRGERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSY 1494
Query: 86 S----------------KPLVPNAALLGPPAQVGAPAG----PAPVAFSSSAATSSSTST 125
S ++ L ++ G +G + SS+ STS
Sbjct: 1495 SPYGSGSGWSSSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSG 1554
Query: 126 PTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCPCCCCCGCPDRPGRRG 185
+SSC A G ++ G G GS + G G G+GSG S PG
Sbjct: 1555 QSSSCGQHGASSGQSSSHGQ-HGSGSSQSSGYGRQGSGSGQS-------------PGHGQ 1600
Query: 186 RRRGCAPSP 194
R G SP
Sbjct: 1601 RGSGSRQSP 1609
Score = 42.4 bits (98), Expect = 0.001
Identities = 54/193 (27%), Positives = 69/193 (35%), Gaps = 44/193 (22%)
Query: 2 RPALGHPRSVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRR 61
R +LGH + S SG P P RGR GSG +S+ G R
Sbjct: 991 RQSLGHGQH-GSGSGQSPSPS---------------RGRHGSGSGQSSSY------GPYR 1028
Query: 62 GGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSS 121
G G S S L + ++ G Q G+ +G SS+
Sbjct: 1029 SGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYG---QHGSSSG-----HSSTHGQHG 1080
Query: 122 STSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCPCCCCCGCPDRP 181
STS +SSC A G ++ G G GS + G G G+GSG S P
Sbjct: 1081 STSGQSSSCGQHGASSGQSSSHGQ-HGSGSSQSSGYGRQGSGSGQS-------------P 1126
Query: 182 GRRGRRRGCAPSP 194
G R G SP
Sbjct: 1127 GHGQRGSGSRQSP 1139
Score = 39.3 bits (90), Expect = 0.010
Identities = 48/177 (27%), Positives = 66/177 (37%), Gaps = 27/177 (15%)
Query: 2 RPALGHPRSVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRR 61
R +LGH + S SG P P RGR GSG +S+ + G G G
Sbjct: 1461 RQSLGHGQH-GSGSGQSPSPS---------------RGRHGSGSGQSSSYSPYGSGSGWS 1504
Query: 62 GGGG----GSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVA--FSS 115
G GS SS RE S ++ Q G+ +G + +
Sbjct: 1505 SSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGA 1564
Query: 116 SAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGA-----GGTGTGSGAS 167
S+ SSS S S ++ G+ +G G G R +G G G+GSG S
Sbjct: 1565 SSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRS 1621
Score = 37.7 bits (86), Expect = 0.029
Identities = 44/162 (27%), Positives = 62/162 (38%), Gaps = 29/162 (17%)
Query: 34 GGSFRGRRGSGDSSTSTSTSRGGGGGRR--------GGGGGSPSSSTGAEREDDDESLSV 85
G S RG R + +S+S + G G R+ G G SPS S G +S S
Sbjct: 499 GQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSSSY 558
Query: 86 ---------SKPLVP-------NAALLGPPAQVGAPAG----PAPVAFSSSAATSSSTST 125
S P ++ L ++ G +G + SS+ STS
Sbjct: 559 GPHGYGSGRSSSRGPYESGSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHGSTSG 618
Query: 126 PTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGAS 167
+SSC A G ++ G G GS + G G+GSG S
Sbjct: 619 QSSSCGQHGATSGQSSSHGQ-HGSGSSQSSRYGQQGSGSGQS 659
Score = 36.6 bits (83), Expect = 0.065
Identities = 40/146 (27%), Positives = 57/146 (39%), Gaps = 18/146 (12%)
Query: 36 SFRGRRGSGDSSTSTSTSRGGGGGR-----RGGGGGSPSSSTGAEREDDDESLSVSKPLV 90
S G+ GSG S +S +G G G+ R G SSS G S S
Sbjct: 634 SSHGQHGSGSSQSSRYGQQGSGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNG---- 689
Query: 91 PNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTS---------TPTSSCSMTAADFGGGA 141
P+ ++ G + G +G + S + SS S + SS S G +
Sbjct: 690 PHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLS 749
Query: 142 AAGAVGGPGSRSAGGAGGTGTGSGAS 167
++ G GS + G G G+GSG S
Sbjct: 750 SSYGQHGSGSHQSSGHGRQGSGSGHS 775
Score = 36.6 bits (83), Expect = 0.065
Identities = 48/171 (28%), Positives = 63/171 (36%), Gaps = 34/171 (19%)
Query: 6 GHPRSVSSASGSFPPPPAAARLQPLFLRGGSFRG------RRGSGDSSTSTSTSRGGGGG 59
GH S SS S + A + P R GS G + GSG +S+S G G G
Sbjct: 1337 GHRGSGSSQSSGYGRHGAGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGSGSG 1396
Query: 60 RRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAAT 119
+ G G SSS + Q G+ +G SSS
Sbjct: 1397 QSSGFGHHESSSWQS----------------------SGCTQHGSGSG-----HSSSYEQ 1429
Query: 120 SSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGTGSGASCCP 170
S S +S + G ++ G G GSR + G G G+GSG S P
Sbjct: 1430 HGSRSGQSSRGERHGSSSGSSSSYGQ-HGSGSRQSLGHGQHGSGSGQSPSP 1479
Score = 36.2 bits (82), Expect = 0.085
Identities = 38/143 (26%), Positives = 53/143 (37%), Gaps = 13/143 (9%)
Query: 38 RGRRGSGDSSTSTSTSRGGGGGRRGGGG----GSPSSSTGAEREDDDESLSVSKPLVPNA 93
RGR GSG +S+ G G GR G S SS + E S +
Sbjct: 2185 RGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGS 2244
Query: 94 ALLGPPAQVGAPAGP--------APVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGA 145
Q G+ +G + SSS S S+ +SS + G + G
Sbjct: 2245 GHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGR 2304
Query: 146 VG-GPGSRSAGGAGGTGTGSGAS 167
G G G S+ G G+G+G +S
Sbjct: 2305 HGSGSGHSSSYGQHGSGSGWSSS 2327
Score = 36.2 bits (82), Expect = 0.085
Identities = 40/135 (29%), Positives = 53/135 (39%), Gaps = 14/135 (10%)
Query: 39 GRRGSGDSSTSTSTSRGGGG------GRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPN 92
GR+GSG + RG G GR G G G SSS+G ES +
Sbjct: 2526 GRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGR-SSSSGQHGSGLGESSGFGHH-ESS 2583
Query: 93 AALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSR 152
+ +Q G+ +G SS S S +S + G + G G GSR
Sbjct: 2584 SGQSSSYSQHGSGSG-----HSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQ-HGSGSR 2637
Query: 153 SAGGAGGTGTGSGAS 167
+ G G G+GSG S
Sbjct: 2638 QSSGHGRQGSGSGQS 2652
Score = 35.8 bits (81), Expect = 0.11
Identities = 40/142 (28%), Positives = 52/142 (36%), Gaps = 13/142 (9%)
Query: 39 GRRGSGDSSTSTSTSRGGGGGRRGGGG----GSPSSSTGAEREDDDESLSVSKPLVPNAA 94
G+RGSG + +S G G GR G GS SS E E S +
Sbjct: 427 GQRGSGSGQSPSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHESSSEHSSGYTQHGSGSG 486
Query: 95 LLGPPAQVGAPAGPAP--VAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGP--- 149
Q G+ +G + SSA +SSS S + G+ +G P
Sbjct: 487 HSSGHGQHGSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQSPSPSRG 546
Query: 150 ----GSRSAGGAGGTGTGSGAS 167
GSR + G G GSG S
Sbjct: 547 RHESGSRQSSSYGPHGYGSGRS 568
Score = 35.8 bits (81), Expect = 0.11
Identities = 40/135 (29%), Positives = 53/135 (39%), Gaps = 14/135 (10%)
Query: 39 GRRGSGDSSTSTSTSRGGGG------GRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPN 92
GR+GSG + RG G GR G G G SSS+G ES +
Sbjct: 1116 GRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGR-SSSSGQHGSGLGESSGFGHH-ESS 1173
Query: 93 AALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSR 152
+ +Q G+ +G SS S S +S + G + G G GSR
Sbjct: 1174 SGQSSSYSQHGSGSG-----HSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQ-HGSGSR 1227
Query: 153 SAGGAGGTGTGSGAS 167
+ G G G+GSG S
Sbjct: 1228 QSSGHGRQGSGSGHS 1242
Score = 35.8 bits (81), Expect = 0.11
Identities = 43/152 (28%), Positives = 58/152 (38%), Gaps = 23/152 (15%)
Query: 36 SFRGRRGSGDSSTSTSTSRGGGGGR-----RGGGGGSPSSSTGAEREDDDESLSVSKPLV 90
S G+ GSG S +S+ +G G G+ R G G SSS G S S +
Sbjct: 1804 SSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGS 1863
Query: 91 PNAALLG------------PPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFG 138
+ G Q G+ +G SSS S S +S + G
Sbjct: 1864 GSGQSSGFGHHESSSWQSSGYTQHGSGSG-----HSSSYEQHGSRSGQSSRGEQHGSSSG 1918
Query: 139 GGAAAGAVGGPGSRSAGGAGGTGTGSGASCCP 170
++ G G GSR + G G G+GSG S P
Sbjct: 1919 SSSSYGQ-HGSGSRQSLGHGQHGSGSGQSPSP 1949
Score = 35.4 bits (80), Expect = 0.14
Identities = 43/152 (28%), Positives = 58/152 (38%), Gaps = 23/152 (15%)
Query: 36 SFRGRRGSGDSSTSTSTSRGGGGGR-----RGGGGGSPSSSTGAEREDDDESLSVSKPLV 90
S G+ GSG S +S+ +G G G+ R G G SSS G S S +
Sbjct: 2274 SSHGQHGSGSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSSYGQHGSGSGWSSSSGRHGS 2333
Query: 91 PNAALLG------------PPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFG 138
+ G Q G+ +G SSS S S +S + G
Sbjct: 2334 GSGQSSGFGHHESSSWQSSGYTQHGSGSG-----HSSSYEQHGSRSGQSSRGERHGSSSG 2388
Query: 139 GGAAAGAVGGPGSRSAGGAGGTGTGSGASCCP 170
++ G G GSR + G G G+GSG S P
Sbjct: 2389 SSSSYGQ-HGSGSRQSLGHGQHGSGSGQSPSP 2419
Score = 35.0 bits (79), Expect = 0.19
Identities = 39/136 (28%), Positives = 55/136 (40%), Gaps = 16/136 (11%)
Query: 39 GRRGSGDSSTSTSTSRGGGG------GRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPN 92
GR+GSG + RG G GR G G G SSS+G ES +
Sbjct: 1586 GRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGR-SSSSGQHGSGLGESSGFGHH-ESS 1643
Query: 93 AALLGPPAQVGAPAG-PAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGS 151
+ +Q G+ +G + S + SS S S +++ +G G GS
Sbjct: 1644 SGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRSSSRYG-------QHGSGS 1696
Query: 152 RSAGGAGGTGTGSGAS 167
R + G G G+GSG S
Sbjct: 1697 RQSSGHGRQGSGSGQS 1712
Score = 35.0 bits (79), Expect = 0.19
Identities = 37/139 (26%), Positives = 52/139 (37%), Gaps = 10/139 (7%)
Query: 33 RGGSFRGRRGSGDSSTSTSTSRGGGGGRRGG----GGGSPSSSTGAEREDDDESLSVSKP 88
R S GR+GSG + + G G G G GS SS+ E SV
Sbjct: 2167 RQSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQ 2226
Query: 89 LVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGG 148
+ +Q G+ +G S STS +S+ + G ++ G G
Sbjct: 2227 HESGSGHSSAYSQHGSGSG-----HFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQ-HG 2280
Query: 149 PGSRSAGGAGGTGTGSGAS 167
GS + G G+GSG S
Sbjct: 2281 SGSSQSSSYGQQGSGSGQS 2299
Score = 34.7 bits (78), Expect = 0.25
Identities = 38/139 (27%), Positives = 52/139 (37%), Gaps = 10/139 (7%)
Query: 33 RGGSFRGRRGSGDSSTSTSTSRGGGGGRRGG----GGGSPSSSTGAEREDDDESLSVSKP 88
R S GR+GSG + + G G G G GS SS+ E SV
Sbjct: 1227 RQSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQ 1286
Query: 89 LVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGG 148
+ +Q G+ +G S STS +S+ + G ++ G G
Sbjct: 1287 HESGSGHSSAYSQHGSGSG-----HFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGH-RG 1340
Query: 149 PGSRSAGGAGGTGTGSGAS 167
GS + G G G GSG S
Sbjct: 1341 SGSSQSSGYGRHGAGSGQS 1359
Score = 34.7 bits (78), Expect = 0.25
Identities = 38/143 (26%), Positives = 53/143 (37%), Gaps = 13/143 (9%)
Query: 38 RGRRGSGDSSTSTSTSRGGGGGRRGGGG----GSPSSSTGAEREDDDESLSVSKPLVPNA 93
RGR GSG +S+ G G GR G S SS + E S +
Sbjct: 1715 RGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSSAYSQHGSGS 1774
Query: 94 ALLGPPAQVGAPAGP--------APVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGA 145
Q G+ +G + SSS S S+ +SS + G + G
Sbjct: 1775 GHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQHGSGSSQSSSYGQQGSGSGQSPSRGR 1834
Query: 146 VG-GPGSRSAGGAGGTGTGSGAS 167
G G G S+ G G+G+G +S
Sbjct: 1835 HGSGSGHSSSYGQHGSGSGWSSS 1857
Score = 34.7 bits (78), Expect = 0.25
Identities = 39/129 (30%), Positives = 49/129 (37%), Gaps = 28/129 (21%)
Query: 39 GRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGP 98
GR GSG +S+S G G G G G SSS +S S S
Sbjct: 2082 GRHGSGSGRSSSSGQHGPGLGESSGFGHHESSS--------GQSSSYS------------ 2121
Query: 99 PAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAG 158
Q G+ +G SS S S +S + G + G G GSR + G G
Sbjct: 2122 --QHGSGSG-----HSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQ-HGSGSRQSSGHG 2173
Query: 159 GTGTGSGAS 167
G+GSG S
Sbjct: 2174 RQGSGSGHS 2182
Score = 33.9 bits (76), Expect = 0.42
Identities = 37/139 (26%), Positives = 52/139 (37%), Gaps = 10/139 (7%)
Query: 33 RGGSFRGRRGSGDSSTSTSTSRGGGGGRRGG----GGGSPSSSTGAEREDDDESLSVSKP 88
R S GR+GSG + + G G G G GS SS+ E SV
Sbjct: 1697 RQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQ 1756
Query: 89 LVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGG 148
+ +Q G+ +G S STS +S+ + G ++ G G
Sbjct: 1757 HESGSGHSSAYSQHGSGSG-----HFCSQGQHGSTSGQSSTFDQEGSSTGQSSSHGQ-HG 1810
Query: 149 PGSRSAGGAGGTGTGSGAS 167
GS + G G+GSG S
Sbjct: 1811 SGSSQSSSYGQQGSGSGQS 1829
Score = 33.9 bits (76), Expect = 0.42
Identities = 39/141 (27%), Positives = 51/141 (36%), Gaps = 11/141 (7%)
Query: 38 RGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPS----SSTGAEREDDDESLSVSKPLVPNA 93
RGR GSG +S+ G G GR G S SS + E S +
Sbjct: 2655 RGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRLGHSSVFGQHESGSGHSSAYSQHGSGS 2714
Query: 94 ALLGPPAQVGAPAGPAPV--AFSSSAATSSSTSTPTSSCSMTAADFGGGAAAG-----AV 146
Q G+ +G + SS SSS S S ++ GA +G
Sbjct: 2715 GHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSLSHGR 2774
Query: 147 GGPGSRSAGGAGGTGTGSGAS 167
G GS + G G+GSG S
Sbjct: 2775 HGSGSGQSSSYGQHGSGSGQS 2795
Score = 33.5 bits (75), Expect = 0.55
Identities = 38/139 (27%), Positives = 52/139 (37%), Gaps = 10/139 (7%)
Query: 33 RGGSFRGRRGSGDSSTSTSTSRGGGGGRRGG----GGGSPSSSTGAEREDDDESLSVSKP 88
R S GR+GSG + + G G G G GS SS+ E SV
Sbjct: 2637 RQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRLGHSSVFGQ 2696
Query: 89 LVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGG 148
+ +Q G+ +G S STS +S+ + G ++ G G
Sbjct: 2697 HESGSGHSSAYSQHGSGSG-----HFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGH-RG 2750
Query: 149 PGSRSAGGAGGTGTGSGAS 167
GS + G G G GSG S
Sbjct: 2751 SGSSQSSGYGRHGAGSGQS 2769
Score = 31.6 bits (70), Expect = 2.1
Identities = 49/187 (26%), Positives = 69/187 (36%), Gaps = 41/187 (21%)
Query: 2 RPALGHPRSVSSASGSFPPPPAAARLQPLFLRGGS------FRGRRGSGDSSTSTSTSRG 55
R +LGH R SGS R P +R GS G+ GSG S + +
Sbjct: 291 RQSLGHGRQ---GSGS--------RQSPSHVRHGSGSGHSSSHGQHGSGSSYSYSRGHYE 339
Query: 56 GGGGRRGGGGGSPS---SSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVA 112
G G+ G G S S+G + S S+ Q G+ +G A +
Sbjct: 340 SGSGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQ------------GQHGSTSGQASSS 387
Query: 113 --FSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAG-------GAGGTGTG 163
SS+ SSS S+ ++ + +G G G R +G G GTG G
Sbjct: 388 GQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSGQHGTGFG 447
Query: 164 SGASCCP 170
+S P
Sbjct: 448 RSSSSGP 454
Score = 31.2 bits (69), Expect = 2.7
Identities = 43/163 (26%), Positives = 55/163 (33%), Gaps = 35/163 (21%)
Query: 40 RRGSGDSSTSTSTSRGGGGGRRGGGGG-SPSS---STGAEREDDDESLSVSKPLVPNAAL 95
R SG S+ + + G G+RG G G SPSS TG R
Sbjct: 408 RHSSGRGQHSSGSGQSPGHGQRGSGSGQSPSSGQHGTGFGR------------------- 448
Query: 96 LGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAG 155
+ +GP S+ S+ S T G G ++G G GSRS
Sbjct: 449 -------SSSSGPYVSGSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGH-GQHGSRSGQ 500
Query: 156 GAGGTGTGSGASCCPCCCCCGCPDRP----GRRGRRRGCAPSP 194
+ G GS A G R R G G +PSP
Sbjct: 501 SSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQSPSP 543
Score = 30.4 bits (67), Expect = 4.6
Identities = 41/148 (27%), Positives = 57/148 (38%), Gaps = 23/148 (15%)
Query: 36 SFRGRRGSGDSSTSTSTSRGGGGGR-----RGGGGGSPSSSTGAEREDDDESLSVSKPLV 90
S GR+GSG + + G G + G G S SSS G ++ +
Sbjct: 763 SGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCSSSCGHYESGSGQASGFGQH-- 820
Query: 91 PNAALLGPPAQVGAPAGPAPVAFSS-----SAATSSSTSTPTSSCSMTAADFGGGAAAG- 144
Q + G A FSS S + SS+S S S ++ +G +A
Sbjct: 821 -----ESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSSGQHDSSSGQSSSYGQHESASH 875
Query: 145 -AVG----GPGSRSAGGAGGTGTGSGAS 167
A G G GS + G G G+GSG S
Sbjct: 876 HASGRGRHGSGSGQSPGHGQRGSGSGQS 903
Score = 30.0 bits (66), Expect = 6.1
Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 18/139 (12%)
Query: 36 SFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAAL 95
S G+ GSG S +S+ G G+ G G S S + S S
Sbjct: 789 SSHGQHGSGTSCSSSCGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSS-------- 840
Query: 96 LGPPAQVGAPAGPAPVA--FSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRS 153
+ G+ +G + + SS+ SSS S+ + G+ +G G G R
Sbjct: 841 ---QGRHGSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRG 897
Query: 154 AGGA-----GGTGTGSGAS 167
+G G G+GSG S
Sbjct: 898 SGSGQSPSYGRHGSGSGRS 916
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 46.2 bits (108), Expect = 8e-05
Identities = 48/185 (25%), Positives = 66/185 (35%), Gaps = 28/185 (15%)
Query: 8 PRSVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGS 67
P + S PPP A QP S RG RG G S T + S G GGGG S
Sbjct: 1024 PEMETGGSPDDPPPRLALGPQP------SLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSS 1077
Query: 68 -----------PSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVG---------APAG 107
P +++ A PLV + G P + G +PA
Sbjct: 1078 QGPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPAS 1137
Query: 108 PAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGA--VGGPGSRSAGGAGGTGTGSG 165
P P ++ + +S PT + G ++ G+ P ++ GG G GS
Sbjct: 1138 PQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPTGGGGGGGSS 1197
Query: 166 ASCCP 170
S P
Sbjct: 1198 PSPAP 1202
Score = 44.3 bits (103), Expect = 3e-04
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 11/166 (6%)
Query: 3 PALGHPRSVSSASGSFPPPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRG 62
PA P + G PPP + ++ + R S +ST +S S GGG G
Sbjct: 1651 PAPAAPAPAAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAGG 1710
Query: 63 GGGGSPSSSTGAERED------DDESL-SVSKPLVPNAALLGPPAQV-GAPAGPAPVAFS 114
GGG ++G E D D ++ S P P L P+++ G G +
Sbjct: 1711 GGGAGAGVASGPELLDTYVAYLDGQAFGGSSTPGPPYPPQLMTPSKLRGRALGASGGLRP 1770
Query: 115 SSAATSSSTSTPTS-SCSMTAADFGGGAAAGAVGGPGSRSAGGAGG 159
+ TPTS + S+T A G A A GP +AG AGG
Sbjct: 1771 GPSGGLRDPVTPTSPTVSVTGAGTDGLLALRACSGP--PTAGVAGG 1814
Score = 38.9 bits (89), Expect = 0.013
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 84 SVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAA 143
S+ + L+P GPP P P P+A ++A ++ ++ S S FGG +AA
Sbjct: 1832 SLPRKLLPWEEGPGPPP----PPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAA 1887
Query: 144 GAVGGPGSRSAGGAGGTGTGSGASCCP 170
G P +R G GG GAS P
Sbjct: 1888 GG-ALPWARGGSGGGGDSHHGGASYVP 1913
Score = 36.6 bits (83), Expect = 0.065
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 53 SRGGGGGRRGGGGGSPSSSTGAERE---DDDESLSVSKPLV------PNAALLGPPAQVG 103
S GGG GG P ++ +R+ DD +S +SKP+ P L PP G
Sbjct: 1898 SGGGGDSHHGGASYVPERTSSLQRQRLSDDSQSSLLSKPVSSLFQNWPKPPL--PPLPTG 1955
Query: 104 APAGPAPVAFSSSAATSSSTSTPTSS 129
G +P A ++ ATS S S+ ++S
Sbjct: 1956 T--GVSPTAAAAPGATSPSASSSSTS 1979
Score = 31.6 bits (70), Expect = 2.1
Identities = 27/87 (31%), Positives = 30/87 (34%), Gaps = 36/87 (41%)
Query: 255 GAASGAHNH--HLHHHHAAPP------LHLPAPSAATAGA---------------KARGA 291
G AH+H H HHHHA PP H P P G RG
Sbjct: 991 GPLPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGW 1050
Query: 292 RGGA-------------GGAGGGLGAA 305
RGG G AGGG G++
Sbjct: 1051 RGGGPSPTPGAPSPSHHGSAGGGGGSS 1077
Score = 31.6 bits (70), Expect = 2.1
Identities = 39/146 (26%), Positives = 49/146 (33%), Gaps = 30/146 (20%)
Query: 20 PPPAAARLQPLFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDD 79
PPPA A P S S DS +T T G P+ + A
Sbjct: 1606 PPPAVAAAPPTL---DSTASSLTSYDSEVATLTQGASAAPGDPHPPGPPAPAAPA----- 1657
Query: 80 DESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGG 139
P A GP G +G V SS+ T + S+ S +A+ GG
Sbjct: 1658 -----------PAAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAE-GG 1705
Query: 140 GAAAGAVGGPGSRSAGGAGGTGTGSG 165
G+A G GG G G SG
Sbjct: 1706 GSAGG----------GGGAGAGVASG 1721
Score = 31.2 bits (69), Expect = 2.7
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 273 PLHLPAPSAATAGAKARGARGGAGGAGGGLGAAAAAG-EFAFAYLAWL 319
PL + ++ + A G GG+ G GGG GA A+G E Y+A+L
Sbjct: 1687 PLETISSASTLSSLSAEG--GGSAGGGGGAGAGVASGPELLDTYVAYL 1732
Score = 30.8 bits (68), Expect = 3.6
Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 40/149 (26%)
Query: 60 RRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPPAQVGAPAGPAPVAFSSSAAT 119
RRG G + R + D S+++ P+ + P + A P P + S +
Sbjct: 420 RRGPPGTGLTVPPALLRANSDTSMAL-----PDWMVFSAPGAASSGA-PGPTSGSQGQSQ 473
Query: 120 SSSTSTPTSSCSMTAADFGGGAAA--------------------GAVGGPGSRSAGGAGG 159
S+ +T SS ++ +A GA A + G P AGG GG
Sbjct: 474 PSAPTTKLSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRPSSSGTPREGPAGGTGG 533
Query: 160 TGTGSGASCCPCCCCCGCPDRPGRRGRRR 188
+G G G S G RGRRR
Sbjct: 534 SG-GPGGSL-------------GSRGRRR 548
>gi|38683807 ankyrin repeat domain protein 17 isoform a [Homo
sapiens]
Length = 2603
Score = 46.2 bits (108), Expect = 8e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 43 SGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDE 81
S +SS+ + S GGGGG GGGGG +SS +E E+DD+
Sbjct: 85 SSESSSDSDNSGGGGGGGGGGGGGGGTSSNNSEEEEDDD 123
Score = 45.8 bits (107), Expect = 1e-04
Identities = 23/49 (46%), Positives = 28/49 (57%)
Query: 33 RGGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDE 81
R + R S SS S ++ GGGGG GGGGG SS+ E EDDD+
Sbjct: 76 RNRTCRPPSSSESSSDSDNSGGGGGGGGGGGGGGGTSSNNSEEEEDDDD 124
Score = 43.5 bits (101), Expect = 5e-04
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 46 SSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSK 87
S + S GGGGG GGGGG+ S+++ E +DDDE VS+
Sbjct: 90 SDSDNSGGGGGGGGGGGGGGGTSSNNSEEEEDDDDEEEEVSE 131
Score = 29.6 bits (65), Expect = 7.9
Identities = 35/122 (28%), Positives = 49/122 (40%), Gaps = 41/122 (33%)
Query: 69 SSSTGAEREDDDESLSVSKPLVPNAALLGPPA--QVGAPAGPAPVAFSSS---------- 116
+++T AE E S P V AA+ GPPA +VG G + A S+S
Sbjct: 9 AAATAAEGEG-------SPPAV--AAVAGPPAAAEVGGGVGGSSRARSASSPRGMVRVCD 59
Query: 117 --------------AATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGT 162
A + + P+SS S + +D GG G GG GG GGT +
Sbjct: 60 LLLKKKPPQQQHHKAKRNRTCRPPSSSESSSDSDNSGGGGGGGGGG------GGGGGTSS 113
Query: 163 GS 164
+
Sbjct: 114 NN 115
>gi|38683816 ankyrin repeat domain protein 17 isoform b [Homo
sapiens]
Length = 2352
Score = 46.2 bits (108), Expect = 8e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 43 SGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDE 81
S +SS+ + S GGGGG GGGGG +SS +E E+DD+
Sbjct: 85 SSESSSDSDNSGGGGGGGGGGGGGGGTSSNNSEEEEDDD 123
Score = 45.8 bits (107), Expect = 1e-04
Identities = 23/49 (46%), Positives = 28/49 (57%)
Query: 33 RGGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDE 81
R + R S SS S ++ GGGGG GGGGG SS+ E EDDD+
Sbjct: 76 RNRTCRPPSSSESSSDSDNSGGGGGGGGGGGGGGGTSSNNSEEEEDDDD 124
Score = 43.5 bits (101), Expect = 5e-04
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 46 SSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSK 87
S + S GGGGG GGGGG+ S+++ E +DDDE VS+
Sbjct: 90 SDSDNSGGGGGGGGGGGGGGGTSSNNSEEEEDDDDEEEEVSE 131
Score = 29.6 bits (65), Expect = 7.9
Identities = 35/122 (28%), Positives = 49/122 (40%), Gaps = 41/122 (33%)
Query: 69 SSSTGAEREDDDESLSVSKPLVPNAALLGPPA--QVGAPAGPAPVAFSSS---------- 116
+++T AE E S P V AA+ GPPA +VG G + A S+S
Sbjct: 9 AAATAAEGEG-------SPPAV--AAVAGPPAAAEVGGGVGGSSRARSASSPRGMVRVCD 59
Query: 117 --------------AATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGAGGTGT 162
A + + P+SS S + +D GG G GG GG GGT +
Sbjct: 60 LLLKKKPPQQQHHKAKRNRTCRPPSSSESSSDSDNSGGGGGGGGGG------GGGGGTSS 113
Query: 163 GS 164
+
Sbjct: 114 NN 115
>gi|60593038 keratin associated protein 5-4 [Homo sapiens]
Length = 288
Score = 46.2 bits (108), Expect = 8e-05
Identities = 44/165 (26%), Positives = 54/165 (32%), Gaps = 19/165 (11%)
Query: 35 GSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAA 94
GS G +G S + G GG +GG G S G + VS
Sbjct: 82 GSCGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCVSCG------ 135
Query: 95 LLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGG-GAAAGAVGGPGS-- 151
G+ G S S S C GG G+ G+ GG GS
Sbjct: 136 --------GSKGGCGSCGGSKGGCVSCGGSK--GGCGSCGGSKGGCGSCGGSKGGCGSCG 185
Query: 152 RSAGGAGGTGTGSGASCCPCCCCCGCPDRPGRRGRRRGCAPSPRC 196
S GG G G + C PCCC GC + + C S C
Sbjct: 186 GSKGGCGSCGCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSSSGC 230
Score = 36.6 bits (83), Expect = 0.065
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 11/58 (18%)
Query: 130 CSMTAADFGGGAAAGAVGGPGSRSAG---GAGGTGTGSG---ASCC-PCCCC---CGC 177
CS GG +G GG GS G G GG G+G G +SCC P CCC C C
Sbjct: 6 CSGGCGSGCGGCGSGC-GGCGSGCGGCGSGCGGCGSGCGGCGSSCCVPICCCKPVCCC 62
Score = 30.4 bits (67), Expect = 4.6
Identities = 40/167 (23%), Positives = 49/167 (29%), Gaps = 28/167 (16%)
Query: 35 GSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSS--STGAEREDDDESLSVSKPLVPN 92
G +G GS S S GG G G GGS S G + V
Sbjct: 75 GGSKGGYGSCGGSKGGCVSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCVSC 134
Query: 93 AALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGG-GAAAGAVGGPGS 151
G G G V+ S S C GG G+ G+ GG GS
Sbjct: 135 GGSKGGCGSCGGSKGGC-VSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGS 193
Query: 152 RS------------AGGAGGT------------GTGSGASCCPCCCC 174
+ G G + +G G+SCC CC
Sbjct: 194 CGCSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSSSGCGSSCCQSSCC 240
>gi|186928829 dermokine isoform 4 precursor [Homo sapiens]
Length = 386
Score = 45.4 bits (106), Expect = 1e-04
Identities = 36/155 (23%), Positives = 59/155 (38%), Gaps = 31/155 (20%)
Query: 35 GSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAA 94
GS R + + + GGG GGG GS S S+G+ D+ +
Sbjct: 218 GSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNN------------ 265
Query: 95 LLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSA 154
G+ +G + SS ++ S+ + + + D G ++ G+ G S +
Sbjct: 266 --------GSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNH 317
Query: 155 GGAGGTGTGSGASCCPCCCCCGCPDRPGRRGRRRG 189
GG+GG G G C ++PG R G
Sbjct: 318 GGSGG-GNGHKPGC----------EKPGNEARGSG 341
Score = 40.4 bits (93), Expect = 0.004
Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 6/153 (3%)
Query: 44 GDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPP---- 99
G+S+ S + G +GG GG P+ T + + N PP
Sbjct: 178 GNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSGS 237
Query: 100 --AQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGA 157
+ G + SS + ++ + +SS ++ GG++ G+ GG S G
Sbjct: 238 GGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSR 297
Query: 158 GGTGTGSGASCCPCCCCCGCPDRPGRRGRRRGC 190
G +G+ S G G + GC
Sbjct: 298 GDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGC 330
Score = 36.2 bits (82), Expect = 0.085
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 10/91 (10%)
Query: 2 RPALGHPRSVSSASGSFPPPPAAARLQPLFLRGGS----------FRGRRGSGDSSTSTS 51
+P G R+ + G PPP+ + GGS G +G SS +S
Sbjct: 214 QPGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSS 273
Query: 52 TSRGGGGGRRGGGGGSPSSSTGAEREDDDES 82
+ GG G GGS +S G+ + ES
Sbjct: 274 SGSSSGGSSGGSSGGSSGNSGGSRGDSGSES 304
Score = 33.1 bits (74), Expect = 0.72
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 34 GGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPS--SSTGA 74
GGS G G S S+ S G GG RG G S SSTG+
Sbjct: 270 GGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGS 312
>gi|186928827 dermokine isoform 5 precursor [Homo sapiens]
Length = 398
Score = 45.4 bits (106), Expect = 1e-04
Identities = 36/155 (23%), Positives = 59/155 (38%), Gaps = 31/155 (20%)
Query: 35 GSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAA 94
GS R + + + GGG GGG GS S S+G+ D+ +
Sbjct: 218 GSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNN------------ 265
Query: 95 LLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSA 154
G+ +G + SS ++ S+ + + + D G ++ G+ G S +
Sbjct: 266 --------GSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNH 317
Query: 155 GGAGGTGTGSGASCCPCCCCCGCPDRPGRRGRRRG 189
GG+GG G G C ++PG R G
Sbjct: 318 GGSGG-GNGHKPGC----------EKPGNEARGSG 341
Score = 40.4 bits (93), Expect = 0.004
Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 6/153 (3%)
Query: 44 GDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPP---- 99
G+S+ S + G +GG GG P+ T + + N PP
Sbjct: 178 GNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSGS 237
Query: 100 --AQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGA 157
+ G + SS + ++ + +SS ++ GG++ G+ GG S G
Sbjct: 238 GGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSR 297
Query: 158 GGTGTGSGASCCPCCCCCGCPDRPGRRGRRRGC 190
G +G+ S G G + GC
Sbjct: 298 GDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGC 330
Score = 36.2 bits (82), Expect = 0.085
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 10/91 (10%)
Query: 2 RPALGHPRSVSSASGSFPPPPAAARLQPLFLRGGS----------FRGRRGSGDSSTSTS 51
+P G R+ + G PPP+ + GGS G +G SS +S
Sbjct: 214 QPGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSS 273
Query: 52 TSRGGGGGRRGGGGGSPSSSTGAEREDDDES 82
+ GG G GGS +S G+ + ES
Sbjct: 274 SGSSSGGSSGGSSGGSSGNSGGSRGDSGSES 304
Score = 33.1 bits (74), Expect = 0.72
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 34 GGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPS--SSTGA 74
GGS G G S S+ S G GG RG G S SSTG+
Sbjct: 270 GGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGS 312
>gi|186928825 dermokine isoform 3 precursor [Homo sapiens]
Length = 416
Score = 45.4 bits (106), Expect = 1e-04
Identities = 36/155 (23%), Positives = 59/155 (38%), Gaps = 31/155 (20%)
Query: 35 GSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAA 94
GS R + + + GGG GGG GS S S+G+ D+ +
Sbjct: 218 GSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNN------------ 265
Query: 95 LLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSA 154
G+ +G + SS ++ S+ + + + D G ++ G+ G S +
Sbjct: 266 --------GSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNH 317
Query: 155 GGAGGTGTGSGASCCPCCCCCGCPDRPGRRGRRRG 189
GG+GG G G C ++PG R G
Sbjct: 318 GGSGG-GNGHKPGC----------EKPGNEARGSG 341
Score = 40.4 bits (93), Expect = 0.004
Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 6/153 (3%)
Query: 44 GDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPP---- 99
G+S+ S + G +GG GG P+ T + + N PP
Sbjct: 178 GNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSGS 237
Query: 100 --AQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGA 157
+ G + SS + ++ + +SS ++ GG++ G+ GG S G
Sbjct: 238 GGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSR 297
Query: 158 GGTGTGSGASCCPCCCCCGCPDRPGRRGRRRGC 190
G +G+ S G G + GC
Sbjct: 298 GDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGC 330
Score = 36.2 bits (82), Expect = 0.085
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 10/91 (10%)
Query: 2 RPALGHPRSVSSASGSFPPPPAAARLQPLFLRGGS----------FRGRRGSGDSSTSTS 51
+P G R+ + G PPP+ + GGS G +G SS +S
Sbjct: 214 QPGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSS 273
Query: 52 TSRGGGGGRRGGGGGSPSSSTGAEREDDDES 82
+ GG G GGS +S G+ + ES
Sbjct: 274 SGSSSGGSSGGSSGGSSGNSGGSRGDSGSES 304
Score = 33.1 bits (74), Expect = 0.72
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 34 GGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPS--SSTGA 74
GGS G G S S+ S G GG RG G S SSTG+
Sbjct: 270 GGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGS 312
>gi|33504489 dermokine isoform 2 precursor [Homo sapiens]
Length = 476
Score = 45.4 bits (106), Expect = 1e-04
Identities = 36/155 (23%), Positives = 59/155 (38%), Gaps = 31/155 (20%)
Query: 35 GSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAA 94
GS R + + + GGG GGG GS S S+G+ D+ +
Sbjct: 218 GSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNN------------ 265
Query: 95 LLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSA 154
G+ +G + SS ++ S+ + + + D G ++ G+ G S +
Sbjct: 266 --------GSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNH 317
Query: 155 GGAGGTGTGSGASCCPCCCCCGCPDRPGRRGRRRG 189
GG+GG G G C ++PG R G
Sbjct: 318 GGSGG-GNGHKPGC----------EKPGNEARGSG 341
Score = 40.4 bits (93), Expect = 0.004
Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 6/153 (3%)
Query: 44 GDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPLVPNAALLGPP---- 99
G+S+ S + G +GG GG P+ T + + N PP
Sbjct: 178 GNSAGSFGMNPQGAPWGQGGNGGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSGS 237
Query: 100 --AQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGGA 157
+ G + SS + ++ + +SS ++ GG++ G+ GG S G
Sbjct: 238 GGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSR 297
Query: 158 GGTGTGSGASCCPCCCCCGCPDRPGRRGRRRGC 190
G +G+ S G G + GC
Sbjct: 298 GDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGC 330
Score = 36.2 bits (82), Expect = 0.085
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 10/91 (10%)
Query: 2 RPALGHPRSVSSASGSFPPPPAAARLQPLFLRGGS----------FRGRRGSGDSSTSTS 51
+P G R+ + G PPP+ + GGS G +G SS +S
Sbjct: 214 QPGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSS 273
Query: 52 TSRGGGGGRRGGGGGSPSSSTGAEREDDDES 82
+ GG G GGS +S G+ + ES
Sbjct: 274 SGSSSGGSSGGSSGGSSGNSGGSRGDSGSES 304
Score = 33.1 bits (74), Expect = 0.72
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 34 GGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPS--SSTGA 74
GGS G G S S+ S G GG RG G S SSTG+
Sbjct: 270 GGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGS 312
>gi|118766339 thyroid transcription factor 1 isoform 1 [Homo
sapiens]
Length = 401
Score = 45.1 bits (105), Expect = 2e-04
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 9/127 (7%)
Query: 30 LFLRGGSFRGRRGSGDSSTSTSTSRGGGGGRRGGGGGSPSSSTGAEREDDDESLSVSKPL 89
++ + ++ +R + D + + GGG GGGGG TG ++ + S +
Sbjct: 237 IWFQNHRYKMKRQAKDKAAQQQLQQDSGGG--GGGGG-----TGCPQQQQAQQQSPRRVA 289
Query: 90 VPNAALLGPPAQVGAPAGPAPVAFSSSAATSSSTSTPTSSCSMTAADFG-GGAAAGAVGG 148
VP G P Q GAPA P + A + + + A G GGA GA G
Sbjct: 290 VPVLVKDGKPCQAGAPA-PGAASLQGHAQQQAQHQAQAAQAAAAAISVGSGGAGLGAHPG 348
Query: 149 PGSRSAG 155
SAG
Sbjct: 349 HQPGSAG 355
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,096,976
Number of Sequences: 37866
Number of extensions: 1781964
Number of successful extensions: 49868
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 843
Number of HSP's that attempted gapping in prelim test: 25701
Number of HSP's gapped (non-prelim): 17909
length of query: 578
length of database: 18,247,518
effective HSP length: 108
effective length of query: 470
effective length of database: 14,157,990
effective search space: 6654255300
effective search space used: 6654255300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.