BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|7662292 SPTF-associated factor 65 gamma [Homo sapiens] (414 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|7662292 SPTF-associated factor 65 gamma [Homo sapiens] 842 0.0 gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens] 35 0.16 gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 35 0.16 gi|116174780 SEC24 related gene family, member A [Homo sapiens] 34 0.21 gi|148747351 protein kinase C and casein kinase substrate in neu... 34 0.21 gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 34 0.28 gi|149944526 additional sex combs like 3 [Homo sapiens] 33 0.47 gi|104485446 TBP-associated factor 8 [Homo sapiens] 32 1.1 gi|4758416 golgi-specific brefeldin A resistant guanine nucleoti... 32 1.1 gi|7108367 vav 1 guanine nucleotide exchange factor [Homo sapiens] 31 1.8 gi|12758125 ribosomal RNA processing 8, methyltransferase, homol... 31 1.8 gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens] 31 1.8 gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens] 31 1.8 gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens] 31 1.8 gi|203098334 Myc-binding protein-associated protein [Homo sapiens] 31 1.8 gi|46094072 zinc finger protein 770 [Homo sapiens] 31 1.8 gi|157785548 PAS domain containing 1 [Homo sapiens] 31 2.4 gi|150378549 tangerin [Homo sapiens] 30 3.1 gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 30 4.0 gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 30 4.0 gi|148276998 zinc finger protein 628 [Homo sapiens] 30 4.0 gi|50345997 E1A binding protein p300 [Homo sapiens] 30 5.2 gi|55741864 zinc finger, FYVE domain containing 28 [Homo sapiens] 30 5.2 gi|239757352 PREDICTED: similar to LMARRLC1A [Homo sapiens] 30 5.2 gi|239751859 PREDICTED: similar to LMARRLC1A [Homo sapiens] 30 5.2 gi|166064029 angiomotin isoform 1 [Homo sapiens] 30 5.2 gi|223029510 echinoderm microtubule associated protein like 4 is... 30 5.2 gi|19923497 echinoderm microtubule associated protein like 4 iso... 30 5.2 gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 30 5.2 gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens] 30 5.2 >gi|7662292 SPTF-associated factor 65 gamma [Homo sapiens] Length = 414 Score = 842 bits (2175), Expect = 0.0 Identities = 414/414 (100%), Positives = 414/414 (100%) Query: 1 MNLQRYWGEIPISSSQTNRSSFDLLPREFRLVEVHDPPLHQPSANKPKPPTMLDIPSEPC 60 MNLQRYWGEIPISSSQTNRSSFDLLPREFRLVEVHDPPLHQPSANKPKPPTMLDIPSEPC Sbjct: 1 MNLQRYWGEIPISSSQTNRSSFDLLPREFRLVEVHDPPLHQPSANKPKPPTMLDIPSEPC 60 Query: 61 SLTIHTIQLIQHNRRLRNLIATAQAQNQQQTEGVKTEESEPLPSCPGSPPLPDDLLPLDC 120 SLTIHTIQLIQHNRRLRNLIATAQAQNQQQTEGVKTEESEPLPSCPGSPPLPDDLLPLDC Sbjct: 61 SLTIHTIQLIQHNRRLRNLIATAQAQNQQQTEGVKTEESEPLPSCPGSPPLPDDLLPLDC 120 Query: 121 KNPNAPFQIRHSDPESDFYRGKGEPVTELSWHSCRQLLYQAVATILAHAGFDCANESVLE 180 KNPNAPFQIRHSDPESDFYRGKGEPVTELSWHSCRQLLYQAVATILAHAGFDCANESVLE Sbjct: 121 KNPNAPFQIRHSDPESDFYRGKGEPVTELSWHSCRQLLYQAVATILAHAGFDCANESVLE 180 Query: 181 TLTDVAHEYCLKFTKLLRFAVDREARLGQTPFPDVMEQVFHEVGIGSVLSLQKFWQHRIK 240 TLTDVAHEYCLKFTKLLRFAVDREARLGQTPFPDVMEQVFHEVGIGSVLSLQKFWQHRIK Sbjct: 181 TLTDVAHEYCLKFTKLLRFAVDREARLGQTPFPDVMEQVFHEVGIGSVLSLQKFWQHRIK 240 Query: 241 DYHSYMLQISKQLSEEYERIVNPEKATEDAKPVKIKEEPVSDITFPVSEELEADLASGDQ 300 DYHSYMLQISKQLSEEYERIVNPEKATEDAKPVKIKEEPVSDITFPVSEELEADLASGDQ Sbjct: 241 DYHSYMLQISKQLSEEYERIVNPEKATEDAKPVKIKEEPVSDITFPVSEELEADLASGDQ 300 Query: 301 SLPMGVLGAQSERFPSNLEVEASPQASSAEVNASPLWNLAHVKMEPQESEEGNVSGHGVL 360 SLPMGVLGAQSERFPSNLEVEASPQASSAEVNASPLWNLAHVKMEPQESEEGNVSGHGVL Sbjct: 301 SLPMGVLGAQSERFPSNLEVEASPQASSAEVNASPLWNLAHVKMEPQESEEGNVSGHGVL 360 Query: 361 GSDVFEEPMSGMSEAGIPQSPDDSDSSYGSHSTDSLMGSSPVFNQRCKKRMRKI 414 GSDVFEEPMSGMSEAGIPQSPDDSDSSYGSHSTDSLMGSSPVFNQRCKKRMRKI Sbjct: 361 GSDVFEEPMSGMSEAGIPQSPDDSDSSYGSHSTDSLMGSSPVFNQRCKKRMRKI 414 >gi|40807475 PML-RARA regulated adaptor molecule 1 [Homo sapiens] Length = 669 Score = 34.7 bits (78), Expect = 0.16 Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 13/110 (11%) Query: 25 LPREFRLVEVHDPPLHQPSAN------KPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRN 78 LP++ EV D P P KP PP + D+P +P L +L +++ Sbjct: 79 LPKKPPPPEVTDLPKKPPPPEVTDLPKKPPPPEVTDLPKKPSKL-----ELSDLSKKFPQ 133 Query: 79 LIATAQAQNQQQTE--GVKTEESEPLPSCPGSPPLPDDLLPLDCKNPNAP 126 L AT + Q E + S P P P PL D L + P+ P Sbjct: 134 LGATPFPRKPLQPEVGEAPLKASLPEPGAPARKPLQPDELSHPARPPSEP 183 >gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] Length = 2400 Score = 34.7 bits (78), Expect = 0.16 Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 22/150 (14%) Query: 254 SEEYERIVNPEKATEDAKPVKIKEEPVSDITFPVSEELEADLASGDQSLPMGVLGAQSER 313 S+E E PE +A V+++ + P SE++EA A G+ A+ E Sbjct: 1963 SQEAEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQ------EAEEEA 2016 Query: 314 FPSNLEVEASPQASSAEVNASPLWNLAHVKMEPQESE-EGNVSGHGVLGSDVFEEPMSGM 372 P + VEA P++ E V+ E Q++E + GV + EE Sbjct: 2017 QPESDGVEAQPKSEGEEAQ--------EVEGETQKTEGDAQPESDGVEAPEAEEEAQEAE 2068 Query: 373 SEA------GIPQSPD-DSDSSYGSHSTDS 395 E P+S D D+ + G +S Sbjct: 2069 GEVQEAEGEAHPESEDVDAQEAEGEAQPES 2098 >gi|116174780 SEC24 related gene family, member A [Homo sapiens] Length = 1093 Score = 34.3 bits (77), Expect = 0.21 Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 19/138 (13%) Query: 37 PPLHQ---PSANKPKPPTMLDIPSEPCSLTIHTIQLIQHNRRLRNLIATAQAQNQQQTEG 93 PP +Q P PP+ L+ PS P + T + N + T+ + Q EG Sbjct: 296 PPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTPLGA--------NHLTTSMSGLSLQPEG 347 Query: 94 VKT----EESEPLPSCPGSPPLP---DDLLPLDCKNPNAPFQIRHSDPESDFYRGKGEPV 146 ++ +E LPS P PP+P +D+ L+C NP S P++ K + Sbjct: 348 LRVVNLLQERNMLPSTPLKPPVPNLHEDIQKLNC-NPELFRCTLTSIPQTQALLNKAKLP 406 Query: 147 TELSWHSCRQLLYQAVAT 164 L H + L+ V T Sbjct: 407 LGLLLHPFKDLVQLPVVT 424 >gi|148747351 protein kinase C and casein kinase substrate in neurons 2 [Homo sapiens] Length = 486 Score = 34.3 bits (77), Expect = 0.21 Identities = 49/232 (21%), Positives = 89/232 (38%), Gaps = 61/232 (26%) Query: 203 REARLGQTPFPDVMEQVFHEVGIGSVLSLQKFWQHRIKDYHSYMLQISKQLS-------- 254 +E G + + MEQVF + Q+F + R++ + +L++ K L Sbjct: 213 KELDQGTPQYMENMEQVFEQC--------QQFEEKRLRFFREVLLEVQKHLDLSNVAGYK 264 Query: 255 ---EEYERIVNPEKATEDAKPVKIKEEPVSDITFPVSEELEADL---------------- 295 + E+ + A ED + + P + +P EE ADL Sbjct: 265 AIYHDLEQSIRAADAVEDLRWFRANHGPGMAMNWPQFEEWSADLNRTLSRREKKKATDGV 324 Query: 296 ------ASGDQSLPMGVLGAQSERFPSNLEVEASP-QASSAEVNASPLW---NLAHVKME 345 +GDQSLP + S L V ++P Q++ ++ + +P + E Sbjct: 325 TLTGINQTGDQSLP--------SKPSSTLNVPSNPAQSAQSQSSYNPFEDEDDTGSTVSE 376 Query: 346 PQESEEGNVSGHGVLGS-------DVFEEPMSGMSEAGIPQSPDDSDSSYGS 390 +++ NVS + S D P S ++A +P D D++ G+ Sbjct: 377 KDDTKAKNVSSYEKTQSYPTDWSDDESNNPFSS-TDANGDSNPFDDDATSGT 427 >gi|149773456 hypothetical protein LOC643314 [Homo sapiens] Length = 1427 Score = 33.9 bits (76), Expect = 0.28 Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 5/78 (6%) Query: 260 IVNPEKATEDAKPVKIKEEPVSDITFPVSEELEADLASGDQSLPMGVLGAQSERFPSNLE 319 + NPE+ T A V EEP S ++ E +L+S S+P A SNLE Sbjct: 1235 VSNPEEPTSPAAAVPTLEEPTSSAAAVLTPE---ELSSPAASVPTPEEPASPAAAVSNLE 1291 Query: 320 VEASPQAS--SAEVNASP 335 ASP A+ + EV A P Sbjct: 1292 EPASPAAAVPTPEVAAIP 1309 >gi|149944526 additional sex combs like 3 [Homo sapiens] Length = 2248 Score = 33.1 bits (74), Expect = 0.47 Identities = 36/169 (21%), Positives = 71/169 (42%), Gaps = 12/169 (7%) Query: 235 WQHRIKDYH---SYMLQISKQLSEEYERIVNPEKATEDAKPVKI---KEEPVSDITFPVS 288 W+ R+ + L+I +++ +E + EK E K+ +EE V T P + Sbjct: 319 WKQRLAEGEFTPEMQLRIRQEIEKEKKTEPWKEKFFERFYGEKLGMSREESVKLTTGPNN 378 Query: 289 EELEADLASGDQSLPMGVLGAQSERFPSNLEVEASPQASSAEVNASPLWNLAHVKMEPQE 348 ++ + G LP+ A +E+ P +++ ASP+ + M E Sbjct: 379 AGAQSSSSCGTSGLPVSAQTALAEQQPKSMKSPASPEPGFCATLCPMVEIPPKDIMAELE 438 Query: 349 SEEGNVSGHGVLGSDVFEEPMSGMSEA------GIPQSPDDSDSSYGSH 391 SE+ + V+ ++ EE + + E IP+ ++++S SH Sbjct: 439 SEDILIPEESVIQEEIAEEVETSICECQDENHKTIPEFSEEAESLTNSH 487 >gi|104485446 TBP-associated factor 8 [Homo sapiens] Length = 310 Score = 32.0 bits (71), Expect = 1.1 Identities = 16/56 (28%), Positives = 30/56 (53%) Query: 155 RQLLYQAVATILAHAGFDCANESVLETLTDVAHEYCLKFTKLLRFAVDREARLGQT 210 R+ L V+++L AGF+ A ++ +ETLT++ Y + + + + AR T Sbjct: 34 RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPT 89 >gi|4758416 golgi-specific brefeldin A resistant guanine nucleotide exchange factor 1 [Homo sapiens] Length = 1859 Score = 32.0 bits (71), Expect = 1.1 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%) Query: 322 ASPQASSAEVNASPLWNLAHVKMEPQESEEGNVSGHGVLGSDVFEEPMSGMSEAGIPQSP 381 AS +A+SA V+ S L + + ++ G G EP G SE G+P+ P Sbjct: 277 ASSEAASAVVSPSTDSGLEFSSQTTSKEDLTDLEQPGSPGYSTATEP--GSSELGVPEQP 334 Query: 382 DDSDSSYGSHSTDSLMGSSPVFNQRC 407 D + ++ S + + S P + C Sbjct: 335 DLQEGTHVEKSQSASVESIPEVLEEC 360 >gi|7108367 vav 1 guanine nucleotide exchange factor [Homo sapiens] Length = 845 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/74 (21%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Query: 84 QAQNQQQTEGVKTEESEPLPSCPGSPPLPDDLLPLDCKNPNAPFQIRHSDPESDFYRGKG 143 +AQ++++ E + + E G PP P + P NP ++ ++ E +++ G+ Sbjct: 583 RAQDKKRNE-LGLPKMEVFQEYYGLPPPPGAIGPFLRLNPGDIVELTKAEAEQNWWEGRN 641 Query: 144 EPVTELSWHSCRQL 157 E+ W C ++ Sbjct: 642 TSTNEIGWFPCNRV 655 >gi|12758125 ribosomal RNA processing 8, methyltransferase, homolog [Homo sapiens] Length = 456 Score = 31.2 bits (69), Expect = 1.8 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 21/99 (21%) Query: 11 PISSSQTNRSSFDLLPREFRLVEVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIHTIQLI 70 PI+S+Q + P+ ++ +DPP P + PKPP HT+ Sbjct: 141 PINSAQHLDNVDQTGPKAWKGSTTNDPPKQSPGSTSPKPP--------------HTLSRK 186 Query: 71 Q------HNRRLRNLIATAQAQNQQQTEGVKTEESEPLP 103 Q + RR +N Q +Q E TE++E P Sbjct: 187 QWRNRQKNKRRCKNKFQPPQVPDQAPAE-APTEKTEVSP 224 >gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens] Length = 757 Score = 31.2 bits (69), Expect = 1.8 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 11/113 (9%) Query: 288 SEELEADL---ASGDQSLPMGVLGAQSERFPSNLEVEASPQASSAEVNAS-----PLWNL 339 S++L+ +L A+G+ +G E +N++ EASP++ + + S PL Sbjct: 435 SQDLDEELGSTAAGEIVEADVAIGKGDETPLTNVKTEASPESMLSPSHGSNPIEDPLEAE 494 Query: 340 AHVKMEPQES---EEGNVSGHGVLGSDVFEEPMSGMSEAGIPQSPDDSDSSYG 389 K E +S E G + G + + +E G+SEA + P + D G Sbjct: 495 TQHKFEMSDSLKEESGTIFGSQIKDAPGEDEEEDGVSEAASLEEPKEEDQGEG 547 >gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens] Length = 1235 Score = 31.2 bits (69), Expect = 1.8 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 11/113 (9%) Query: 288 SEELEADL---ASGDQSLPMGVLGAQSERFPSNLEVEASPQASSAEVNAS-----PLWNL 339 S++L+ +L A+G+ +G E +N++ EASP++ + + S PL Sbjct: 541 SQDLDEELGSTAAGEIVEADVAIGKGDETPLTNVKTEASPESMLSPSHGSNPIEDPLEAE 600 Query: 340 AHVKMEPQES---EEGNVSGHGVLGSDVFEEPMSGMSEAGIPQSPDDSDSSYG 389 K E +S E G + G + + +E G+SEA + P + D G Sbjct: 601 TQHKFEMSDSLKEESGTIFGSQIKDAPGEDEEEDGVSEAASLEEPKEEDQGEG 653 >gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens] Length = 951 Score = 31.2 bits (69), Expect = 1.8 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 11/113 (9%) Query: 288 SEELEADL---ASGDQSLPMGVLGAQSERFPSNLEVEASPQASSAEVNAS-----PLWNL 339 S++L+ +L A+G+ +G E +N++ EASP++ + + S PL Sbjct: 614 SQDLDEELGSTAAGEIVEADVAIGKGDETPLTNVKTEASPESMLSPSHGSNPIEDPLEAE 673 Query: 340 AHVKMEPQES---EEGNVSGHGVLGSDVFEEPMSGMSEAGIPQSPDDSDSSYG 389 K E +S E G + G + + +E G+SEA + P + D G Sbjct: 674 TQHKFEMSDSLKEESGTIFGSQIKDAPGEDEEEDGVSEAASLEEPKEEDQGEG 726 >gi|203098334 Myc-binding protein-associated protein [Homo sapiens] Length = 984 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 7/91 (7%) Query: 255 EEYERIVNPEKATEDAKPVKIKEEPVSDITFPVSEELEADLASGDQSLPMGVLGAQSERF 314 +E+ + EKA+ +A+ + P+S+ P E EA SG Q +G Q + Sbjct: 670 KEHVSPIATEKASVNAELLPRFRSPISETQVPRPEN-EALRESGSQKARVGTKSPQRKSI 728 Query: 315 PSNLEVEASPQASSA----EVNASPL--WNL 339 + VE SP S E + PL WNL Sbjct: 729 MEEILVEESPDVDSTKSPWEPDGLPLLEWNL 759 >gi|46094072 zinc finger protein 770 [Homo sapiens] Length = 691 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/57 (28%), Positives = 23/57 (40%) Query: 84 QAQNQQQTEGVKTEESEPLPSCPGSPPLPDDLLPLDCKNPNAPFQIRHSDPESDFYR 140 + Q GVK E + +P G P LP+ LL + NP + + YR Sbjct: 570 EVSESDQMSGVKAESQDFIPGSTGQPCLPNVLLESEQSNPFCSYSEHQEKNDVFLYR 626 >gi|157785548 PAS domain containing 1 [Homo sapiens] Length = 773 Score = 30.8 bits (68), Expect = 2.4 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 3/83 (3%) Query: 323 SPQASSAEVNASPLWNLAHVKMEPQESEEGNVSGHGVLGSDVFEEPMSGMSEAGI--PQS 380 S Q E +PL+ V +E + +V G + E P++ + +AG+ P Sbjct: 283 SLQDFRGEPEVNPLYRADPVDLEFSVDQVDSVDQEGPMDQQDPENPVAPLDQAGLMDPVD 342 Query: 381 PDDS-DSSYGSHSTDSLMGSSPV 402 P+DS D S L SSPV Sbjct: 343 PEDSVDLGAAGASAQPLQPSSPV 365 >gi|150378549 tangerin [Homo sapiens] Length = 1523 Score = 30.4 bits (67), Expect = 3.1 Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 13/148 (8%) Query: 260 IVNPEKATEDAKPVKIKEEPVSDITFPVSEELEADLAS----GDQSLPMGVLGAQSERFP 315 I+ PE E+A+ ++E + E L A + G Q + G Q Sbjct: 871 IIVPEAEKEEAQTSGVQEAETRVGSALKYEALRAPVTQPRVLGSQEAKAEISGVQGSETQ 930 Query: 316 SNLEVEASPQASSAEVNASPLWNLAHVKMEPQESEEGNVSGH--------GVLGSDVFEE 367 EA S W +M+ ES E N SG GVLG++ +E Sbjct: 931 VLRVQEAEAGVWGMSEGKSGAWGAQEAEMKVLESPE-NKSGTFKAQEAEAGVLGNEKGKE 989 Query: 368 PMSGMSEAGIPQSPDDSDSSYGSHSTDS 395 ++EA +P++ S + G+ S Sbjct: 990 AEGSLTEASLPEAQVASGAGAGAPRASS 1017 >gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] Length = 1243 Score = 30.0 bits (66), Expect = 4.0 Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 21/84 (25%) Query: 74 RRLRNLIATAQAQNQQQTEGVKTEESEPLPSCPGSPPL-------PDDLLPLDCKNPNA- 125 R +R +A Q + ++ K E E LP PG PP P + P + + P A Sbjct: 508 RAVRERVAAIQRKREKLR---KARELEALPPEPGPPPATVPMAPGPPSVFPPEPEEPEAD 564 Query: 126 ---PFQIRH-------SDPESDFY 139 PF RH SD E+D Y Sbjct: 565 QHQPFLFRHASYSSTTSDCETDGY 588 >gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] Length = 2968 Score = 30.0 bits (66), Expect = 4.0 Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 18/127 (14%) Query: 275 IKEEPVSDITFPVSEELEA-DLASGDQSLPMGVLGAQSERFPSNLEVEASPQASSAEVNA 333 + +EP +TF S ++ D A +Q GA+ S+ +S +SS+ + Sbjct: 2525 LAQEPGPGLTFEDSGNPKSPDKAQAEQD------GAEESESSSSSSSGSSSSSSSSSSSG 2578 Query: 334 SPLWNLAHVKMEPQESEEGNVSGHGVLGSDVFEEPMSGMSEAGIPQSPDDSDSSYGSHST 393 S E + EEG+ +G G G+ + S A P S S SS S S+ Sbjct: 2579 S----------ETEGEEEGDKNGDGGCGTG-GRNCSAASSRAASPASSSSSSSSSSSSSS 2627 Query: 394 DSLMGSS 400 S SS Sbjct: 2628 SSSSSSS 2634 >gi|148276998 zinc finger protein 628 [Homo sapiens] Length = 1055 Score = 30.0 bits (66), Expect = 4.0 Identities = 31/127 (24%), Positives = 45/127 (35%), Gaps = 14/127 (11%) Query: 37 PPLHQPSANKPKPPTMLDIP-SEPCSLTIHTIQLIQHNRRLRNLIATAQAQNQ------- 88 PP A P+PP L + P + +H + +Q L TAQA + Sbjct: 646 PPSTTAPAAGPQPPAPLAAARAPPATQDVHVLPHLQATLSLEVAGGTAQAPSLGPAAPNS 705 Query: 89 ------QQTEGVKTEESEPLPSCPGSPPLPDDLLPLDCKNPNAPFQIRHSDPESDFYRGK 142 Q +G++ S P P PP P L+ L + A P + G+ Sbjct: 706 QTFLLVQTAQGLQLIPSSVQPPTPPPPPAPPKLILLPSSSAGAGGGRARQGPRAVGKAGQ 765 Query: 143 GEPVTEL 149 G V L Sbjct: 766 GAGVVWL 772 >gi|50345997 E1A binding protein p300 [Homo sapiens] Length = 2414 Score = 29.6 bits (65), Expect = 5.2 Identities = 26/91 (28%), Positives = 31/91 (34%), Gaps = 13/91 (14%) Query: 32 VEVHDPPLHQPSANKPKPPTMLDIPSEPCSLTIH----------TIQLIQHNRRLRNLIA 81 + PP A P PP M P P S +H T QL Q + Sbjct: 849 IGAQQPPATTIPAPVPTPPAM---PPGPQSQALHPPPRQTPTPPTTQLPQQVQPSLPAAP 905 Query: 82 TAQAQNQQQTEGVKTEESEPLPSCPGSPPLP 112 +A QQ T S P P+ P PP P Sbjct: 906 SADQPQQQPRSQQSTAASVPTPTAPLLPPQP 936 >gi|55741864 zinc finger, FYVE domain containing 28 [Homo sapiens] Length = 887 Score = 29.6 bits (65), Expect = 5.2 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 244 SYMLQISKQLSEEYERIVNPEKATEDAKPVKIKEEPVSDITFPVSEELEADLASGDQSLP 303 SY ++K ER +EDA + + P SD P + + D ASG Q Sbjct: 594 SYAAGLAKASDRAPERQEEAPPPSEDASNGREPKAPTSDKCLPHTSGSQVDTASGLQ--- 650 Query: 304 MGVLGAQSERFPSNLEVEA-SPQASSA 329 G G ++ P E+ A SP A A Sbjct: 651 -GEAGVAGQQEPEARELHAGSPPAHEA 676 >gi|239757352 PREDICTED: similar to LMARRLC1A [Homo sapiens] Length = 279 Score = 29.6 bits (65), Expect = 5.2 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 252 QLSEEYERIVNPEKATEDAKPVKIKEEPVSDITFPVSEELEADLASGDQSLP-MGVLG 308 Q+++ + + +PE + D KPV E D + +S++++ ++AS P GV G Sbjct: 211 QVTDGGDCVCHPESSHPDHKPVAQDPEDKGDCKYQISDDIQEEIASRYSRCPSRGVRG 268 >gi|239751859 PREDICTED: similar to LMARRLC1A [Homo sapiens] Length = 279 Score = 29.6 bits (65), Expect = 5.2 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Query: 252 QLSEEYERIVNPEKATEDAKPVKIKEEPVSDITFPVSEELEADLASGDQSLP-MGVLG 308 Q+++ + + +PE + D KPV E D + +S++++ ++AS P GV G Sbjct: 211 QVTDGGDCVCHPESSHPDHKPVAQDPEDKGDCKYQISDDIQEEIASRYSRCPSRGVRG 268 >gi|166064029 angiomotin isoform 1 [Homo sapiens] Length = 1084 Score = 29.6 bits (65), Expect = 5.2 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 15/53 (28%) Query: 91 TEGVKTEESEPLPSCPGSPPLPDDLLPLDCKNPNAPFQIRHSDPESDFYRGKG 143 T GVK P+ S P SPP P+DL KNP + S+FY+ +G Sbjct: 185 TSGVKAHP--PVTSAPLSPPQPNDLY----KNPTS---------SSEFYKAQG 222 >gi|223029510 echinoderm microtubule associated protein like 4 isoform b [Homo sapiens] Length = 923 Score = 29.6 bits (65), Expect = 5.2 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Query: 315 PSNLEVEASPQASSAEVNASPLWNLAHVKMEPQE--SEEGNVSGHGVLGSDVFEEPMSGM 372 PS E + + S + + L N +EP E SEE + G G LG ++EEP + + Sbjct: 844 PSQPLNETAEEESRISSSPTLLENSLEQTVEPSEDHSEEESEEGSGDLGEPLYEEPCNEI 903 Query: 373 SE 374 S+ Sbjct: 904 SK 905 >gi|19923497 echinoderm microtubule associated protein like 4 isoform a [Homo sapiens] Length = 981 Score = 29.6 bits (65), Expect = 5.2 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Query: 315 PSNLEVEASPQASSAEVNASPLWNLAHVKMEPQE--SEEGNVSGHGVLGSDVFEEPMSGM 372 PS E + + S + + L N +EP E SEE + G G LG ++EEP + + Sbjct: 902 PSQPLNETAEEESRISSSPTLLENSLEQTVEPSEDHSEEESEEGSGDLGEPLYEEPCNEI 961 Query: 373 SE 374 S+ Sbjct: 962 SK 963 >gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sapiens] Length = 2715 Score = 29.6 bits (65), Expect = 5.2 Identities = 12/23 (52%), Positives = 15/23 (65%) Query: 37 PPLHQPSANKPKPPTMLDIPSEP 59 PPL P A +P+PP D P+EP Sbjct: 669 PPLGAPEAPEPEPPPADDSPAEP 691 >gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens] Length = 170 Score = 29.6 bits (65), Expect = 5.2 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 3/100 (3%) Query: 316 SNLEVEASPQASSAEVNASPLWNLAHVKMEPQESEEGNVSGHGVLGSDVFEEPMSGMSEA 375 +N+E +A + S + ++S + + ESEE + S SD E S S A Sbjct: 72 TNVERKAKKKRSKSVTSSSSSSSDSSASDSSSESEETSTSSSSE-DSDTDESSSSSSSSA 130 Query: 376 G--IPQSPDDSDSSYGSHSTDSLMGSSPVFNQRCKKRMRK 413 S DSDS S S+ S S ++ KK+ +K Sbjct: 131 SSTTSSSSSDSDSDSSSSSSSSTSTDSSSDDEPPKKKKKK 170 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.313 0.130 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,619,791 Number of Sequences: 37866 Number of extensions: 883595 Number of successful extensions: 3168 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 39 Number of HSP's that attempted gapping in prelim test: 3119 Number of HSP's gapped (non-prelim): 90 length of query: 414 length of database: 18,247,518 effective HSP length: 105 effective length of query: 309 effective length of database: 14,271,588 effective search space: 4409920692 effective search space used: 4409920692 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.