Guide to the Human Genome
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Name: SUPT7L Sequence: fasta or formatted (414aa) NCBI GI: 7662292
Description:

SPTF-associated factor 65 gamma

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         24           1
 C cysteine            1.7          7           1
 D aspartate           5.3         22           2
 E glutamate           9.2         38           2
 F phenylalanine       3.4         14           1
 G glycine             4.8         20           1
 H histidine           3.4         14           1
 I isoleucine          4.1         17           1
 K lysine              4.3         18           2
 L leucine             9.2         38           2
 M methionine          2.4         10           1
 N asparagine          3.6         15           1
 P proline             8.7         36           2
 Q glutamine           6.0         25           3
 R arginine            4.6         19           2
 S serine             10.9         45           3
 T threonine           3.9         16           1
 V valine              5.8         24           1
 W tryptophan          1.0          4           1
 Y tyrosine            1.9          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SPTF-associated factor 65 gamma 
PRAM1                 0.012   PML-RARA regulated adaptor molecule 1 
RP1L1                 0.012   retinitis pigmentosa 1-like 1 
SEC24A                0.011   SEC24 related gene family, member A 
PACSIN2               0.011   protein kinase C and casein kinase substrate in neu...
KIAA0754              0.011   hypothetical protein LOC643314 
ASXL3                 0.010   additional sex combs like 3 
TAF8                  0.009   TBP-associated factor 8 
GBF1                  0.009   golgi-specific brefeldin A resistant guanine nucleoti...
VAV1                  0.007   vav 1 guanine nucleotide exchange factor 
RRP8                  0.007   ribosomal RNA processing 8, methyltransferase, homol...
BRD8                  0.007   bromodomain containing 8 isoform 3 
BRD8                  0.007   bromodomain containing 8 isoform 2 
BRD8                  0.007   bromodomain containing 8 isoform 1 
MYCBPAP               0.007   Myc-binding protein-associated protein 
ZNF770                0.007   zinc finger protein 770 
PASD1                 0.007   PAS domain containing 1 
EHBP1L1               0.006   tangerin 
WNK4                  0.006   WNK lysine deficient protein kinase 4 
TNRC18                0.006   trinucleotide repeat containing 18 
ZNF628                0.006   zinc finger protein 628 
EP300                 0.006   E1A binding protein p300 
ZFYVE28               0.006   zinc finger, FYVE domain containing 28 
LOC100292013          0.006   PREDICTED: similar to LMARRLC1A 
LOC100287831          0.006   PREDICTED: similar to LMARRLC1A 
AMOT                  0.006   angiomotin isoform 1 
EML4                  0.006   echinoderm microtubule associated protein like 4 is...
EML4                  0.006   echinoderm microtubule associated protein like 4 iso...
MLL4                  0.006   myeloid/lymphoid or mixed-lineage leukemia 4 
ZCCHC10               0.006   zinc finger, CCHC domain containing 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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