RRP8 2919

Name: RRP8	Sequence: fasta or formatted (456aa)		NCBI GI: 12758125
Description: ribosomal RNA processing 8, methyltransferase, homolog		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 43 2 C cysteine 2.9 13 1 D aspartate 5.3 24 1 E glutamate 6.8 31 6 F phenylalanine 3.9 18 2 G glycine 5.0 23 2 H histidine 2.0 9 1 I isoleucine 1.5 7 1 K lysine 9.0 41 3 L leucine 8.6 39 2 M methionine 0.9 4 1 N asparagine 2.6 12 1 P proline 8.6 39 3 Q glutamine 6.1 28 1 R arginine 7.9 36 2 S serine 8.6 39 2 T threonine 3.3 15 2 V valine 5.9 27 2 W tryptophan 0.9 4 1 Y tyrosine 0.9 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ribosomal RNA processing 8, methyltransferase, homol... SFRS11 0.024 splicing factor, arginine/serine-rich 11 NOLC1 0.022 nucleolar and coiled-body phosphoprotein 1 SRRM2 0.022 splicing coactivator subunit SRm300 SRRM1 0.020 serine/arginine repetitive matrix 1 NEFM 0.019 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.019 neurofilament, medium polypeptide 150kDa isoform 2 ... NKAP 0.018 NFKB activating protein HDGF2 0.018 hepatoma-derived growth factor-related protein 2 iso... PAF1 0.018 Paf1, RNA polymerase II associated factor, homolog [... HDGF2 0.018 hepatoma-derived growth factor-related protein 2 iso... TCOF1 0.017 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.017 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.017 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.017 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.017 Treacher Collins-Franceschetti syndrome 1 isoform a ... EIF5B 0.017 eukaryotic translation initiation factor 5B SFRS8 0.017 splicing factor, arginine/serine-rich 8 MAPT 0.017 microtubule-associated protein tau isoform 6 POLD3 0.017 DNA-directed DNA polymerase delta 3 RSRC1 0.017 arginine/serine-rich coiled-coil 1 DDX21 0.017 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 NEFH 0.016 neurofilament, heavy polypeptide 200kDa AFF1 0.016 myeloid/lymphoid or mixed-lineage leukemia trithorax ... USP8 0.016 ubiquitin specific peptidase 8 USP8 0.016 ubiquitin specific peptidase 8 USP8 0.016 ubiquitin specific peptidase 8 TOE1 0.016 target of EGR1, member 1 (nuclear) PROCA1 0.016 protein interacting with cyclin A1 C8orf79 0.016 hypothetical protein LOC57604 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.