Guide to the Human Genome
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Name: MRPL15 Sequence: fasta or formatted (296aa) NCBI GI: 7661806
Description:

mitochondrial ribosomal protein L15

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         18           2
 C cysteine            1.0          3           1
 D aspartate           5.1         15           1
 E glutamate           5.1         15           2
 F phenylalanine       4.1         12           2
 G glycine             9.8         29           3
 H histidine           0.7          2           1
 I isoleucine          4.7         14           1
 K lysine              7.4         22           2
 L leucine            11.1         33           2
 M methionine          1.4          4           1
 N asparagine          3.4         10           1
 P proline             9.1         27           2
 Q glutamine           4.1         12           1
 R arginine           10.1         30           3
 S serine              2.7          8           1
 T threonine           4.4         13           2
 V valine              5.1         15           2
 W tryptophan          0.3          1           1
 Y tyrosine            4.4         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial ribosomal protein L15 
EML2                  0.019   echinoderm microtubule associated protein like 2 [Hom...
LARP1                 0.017   la related protein isoform 2 
LARP1                 0.017   la related protein isoform 1 
RPS2                  0.015   ribosomal protein S2 
LOC100293798          0.014   PREDICTED: hypothetical protein 
LOC100129492          0.014   PREDICTED: similar to small nuclear ribonucleoprote...
CHFR                  0.012   checkpoint with forkhead and ring finger domains is...
CHFR                  0.012   checkpoint with forkhead and ring finger domains is...
CHFR                  0.012   checkpoint with forkhead and ring finger domains is...
SFRS2B                0.012   splicing factor, arginine/serine-rich 2B 
LOC100292358          0.012   PREDICTED: hypothetical protein 
LOC100290030          0.012   PREDICTED: hypothetical protein XP_002346594 
LOC100288429          0.012   PREDICTED: hypothetical protein XP_002342435 
COL5A3                0.009   collagen, type V, alpha 3 preproprotein 
NOTCH3                0.009   Notch homolog 3 
RPS6KA5               0.009   ribosomal protein S6 kinase, polypeptide 5 isoform b...
RPS6KA5               0.009   ribosomal protein S6 kinase, polypeptide 5 isoform a...
LOC100293869          0.009   PREDICTED: hypothetical protein 
LOC100133885          0.009   PREDICTED: hypothetical protein 
LOC100291040          0.009   PREDICTED: hypothetical protein XP_002347839 
LOC100289723          0.009   PREDICTED: hypothetical protein XP_002346408 
LOC100289012          0.009   PREDICTED: hypothetical protein XP_002343616 
SNRPD1                0.009   small nuclear ribonucleoprotein D1 polypeptide 16kDa ...
VTN                   0.009   vitronectin precursor 
HMGN4                 0.009   high mobility group nucleosomal binding domain 4 [Ho...
ZNF579                0.009   zinc finger protein 579 
LOC100288017          0.007   PREDICTED: hypothetical protein XP_002343778 
ITPKC                 0.007   inositol 1,4,5-trisphosphate 3-kinase C 
LOC100291835          0.007   PREDICTED: hypothetical protein XP_002346266 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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