Guide to the Human Genome
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Name: RPS6KA5 Sequence: fasta or formatted (549aa) NCBI GI: 32528297
Description:

ribosomal protein S6 kinase, polypeptide 5 isoform b

Referenced in:

Ribosomes

Other entries for this name:
alt prot [802aa] ribosomal protein S6 kinase, polypeptide 5 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         37           2
 C cysteine            0.9          5           1
 D aspartate           5.5         30           2
 E glutamate           8.6         47           3
 F phenylalanine       4.7         26           2
 G glycine             7.3         40           2
 H histidine           4.6         25           1
 I isoleucine          5.3         29           2
 K lysine              8.4         46           4
 L leucine            10.4         57           2
 M methionine          2.6         14           2
 N asparagine          2.6         14           1
 P proline             3.8         21           2
 Q glutamine           3.3         18           1
 R arginine            4.4         24           2
 S serine              5.8         32           2
 T threonine           5.1         28           2
 V valine              6.9         38           2
 W tryptophan          0.5          3           2
 Y tyrosine            2.7         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein S6 kinase, polypeptide 5 isoform b... 
RPS6KA5               0.998   ribosomal protein S6 kinase, polypeptide 5 isoform a...
RPS6KA4               0.670   ribosomal protein S6 kinase, 90kDa, polypeptide 4 iso...
RPS6KA4               0.654   ribosomal protein S6 kinase, 90kDa, polypeptide 4 is...
RPS6KA1               0.382   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.379   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA2               0.379   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.379   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA3               0.374   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
RPS6KA6               0.364   ribosomal protein S6 kinase polypeptide 6 
RPS6KB1               0.305   ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...
RPS6KB2               0.296   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
AKT2                  0.243   AKT2 kinase 
AKT3                  0.242   AKT3 kinase isoform 2 
AKT3                  0.241   AKT3 kinase isoform 1 
PRKCI                 0.226   protein kinase C, iota 
AKT1                  0.225   AKT1 kinase 
AKT1                  0.225   AKT1 kinase 
AKT1                  0.225   AKT1 kinase 
PRKCZ                 0.221   protein kinase C, zeta isoform 2 
PRKCZ                 0.221   protein kinase C, zeta isoform 2 
PRKCZ                 0.221   protein kinase C, zeta isoform 1 
SGK2                  0.218   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK2                  0.218   serum/glucocorticoid regulated kinase 2 isoform beta...
PRKCB                 0.217   protein kinase C, beta isoform 1 
PRKCA                 0.215   protein kinase C, alpha 
SGK3                  0.214   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.214   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK1                  0.213   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.213   serum/glucocorticoid regulated kinase 1 isoform 4 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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