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Search of human proteins with 7657234
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7657234 small acidic protein isoform a [Homo sapiens]
(183 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7657234 small acidic protein isoform a [Homo sapiens] 376 e-105
gi|218505711 small acidic protein isoform b [Homo sapiens] 288 2e-78
gi|4504487 histidine rich calcium binding protein precursor [Hom... 49 3e-06
gi|16445033 ACRC protein [Homo sapiens] 47 1e-05
gi|115529449 upstream binding transcription factor, RNA polymera... 45 3e-05
gi|115529451 upstream binding transcription factor, RNA polymera... 45 3e-05
gi|7657671 upstream binding transcription factor, RNA polymerase... 45 3e-05
gi|55956788 nucleolin [Homo sapiens] 45 3e-05
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 45 5e-05
gi|42740903 MTERF domain containing 2 [Homo sapiens] 44 8e-05
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 44 8e-05
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 44 8e-05
gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens] 44 1e-04
gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens] 44 1e-04
gi|111607441 hypothetical protein LOC400506 [Homo sapiens] 44 1e-04
gi|24429572 TBP-associated factor RNA polymerase 1-like [Homo sa... 44 1e-04
gi|55769587 probable nucleolar complex protein 14 [Homo sapiens] 43 1e-04
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 43 2e-04
gi|40353734 nucleophosmin 1 isoform 2 [Homo sapiens] 42 2e-04
gi|21361639 DIPB protein [Homo sapiens] 42 3e-04
gi|17975763 myelin transcription factor 1 [Homo sapiens] 42 3e-04
gi|10835067 autoantigen La [Homo sapiens] 42 4e-04
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 42 4e-04
gi|215422388 death-domain associated protein isoform a [Homo sap... 42 4e-04
gi|215422366 death-domain associated protein isoform b [Homo sap... 42 4e-04
gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homo... 42 4e-04
gi|4557509 cylicin 2 [Homo sapiens] 41 5e-04
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 41 5e-04
gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens] 41 5e-04
gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens] 41 5e-04
>gi|7657234 small acidic protein isoform a [Homo sapiens]
Length = 183
Score = 376 bits (966), Expect = e-105
Identities = 183/183 (100%), Positives = 183/183 (100%)
Query: 1 MSAARESHPHGVKRSASPDDDLGSSNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGD 60
MSAARESHPHGVKRSASPDDDLGSSNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGD
Sbjct: 1 MSAARESHPHGVKRSASPDDDLGSSNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGD 60
Query: 61 HKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDD 120
HKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDD
Sbjct: 61 HKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDD 120
Query: 121 DDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKS 180
DDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKS
Sbjct: 121 DDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKS 180
Query: 181 SGS 183
SGS
Sbjct: 181 SGS 183
>gi|218505711 small acidic protein isoform b [Homo sapiens]
Length = 139
Score = 288 bits (736), Expect = 2e-78
Identities = 139/139 (100%), Positives = 139/139 (100%)
Query: 45 MGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGF 104
MGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGF
Sbjct: 1 MGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGF 60
Query: 105 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 164
SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK
Sbjct: 61 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 120
Query: 165 NKKDAKSNYKMMFVKSSGS 183
NKKDAKSNYKMMFVKSSGS
Sbjct: 121 NKKDAKSNYKMMFVKSSGS 139
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 48.5 bits (114), Expect = 3e-06
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 7/112 (6%)
Query: 70 GEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVED-------HDGEGDVAGDDDD 122
GE+D+ EE E + ++ ++ + RH G G E ED H G ++D
Sbjct: 187 GEDDEGEEEEEEEEEEEEASTEYGHQAHRHRGHGSEEDEDVSDGHHHHGPSHRHQGHEED 246
Query: 123 DDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYK 174
DDDD D + DD + E + + E ++V D + +D ++
Sbjct: 247 DDDDDDDDDDDDDDDVSIEYRHQAHRHQGHGIEEDEDVSDGHHHRDPSHRHR 298
Score = 37.4 bits (85), Expect = 0.007
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 62 KSTSHFRT--GEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGD 119
K SH R EE+K+ E+ +++ +S G H G E E+ + EG
Sbjct: 472 KDRSHLRKDDSEEEKEKEED-PGSHEEDDESSEQGEKGTHHGSRDQEDEEDEEEGHGLSL 530
Query: 120 DDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 168
+ +++++ E ++ E + + E+ E E+ A PD E+ + +++
Sbjct: 531 NQEEEEE----EDKEEEEEEEDEERREERAEVGAPLSPDHSEEEEEEEE 575
Score = 37.0 bits (84), Expect = 0.009
Identities = 44/177 (24%), Positives = 68/177 (38%), Gaps = 18/177 (10%)
Query: 6 ESHPHGVK---RSASPDDDLGSSNWEAADLGNE---ERKQKFLRLMGAGKKEHTGRLVIG 59
E H H ++ R +DD G E + E E + R G G +E
Sbjct: 172 EHHHHILRHGHRGHDGEDDEGEEEEEEEEEEEEASTEYGHQAHRHRGHGSEEDEDVSDGH 231
Query: 60 DHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYR--RHCGLGFSEVED-HDG---- 112
H SH G E+ +++ + D + R++ RH G G E ED DG
Sbjct: 232 HHHGPSHRHQGHEEDDDDDDDDDDDDDDDDVSIEYRHQAHRHQGHGIEEDEDVSDGHHHR 291
Query: 113 ---EGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNK 166
+ ++DD+DDD E + + KEE E + EH V D +++
Sbjct: 292 DPSHRHRSHEEDDNDDDDVSTEYGHQAHRHQDHRKEE--VEAVSGEHHHHVPDHRHQ 346
Score = 34.7 bits (78), Expect = 0.047
Identities = 39/179 (21%), Positives = 66/179 (36%), Gaps = 19/179 (10%)
Query: 7 SHPHGVKRSASPDDDLGSSNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSH 66
SH H DDD + + D+ E R Q R G G +E H+ SH
Sbjct: 237 SHRHQGHEEDDDDDDDDDDDDDDDDVSIEYRHQAH-RHQGHGIEEDEDVSDGHHHRDPSH 295
Query: 67 -FRTGEEDKKINEELESQY----------QQSMDSKLSGRYRRHCGLGFSEVEDHDGEGD 115
R+ EED ++++ ++Y ++ +SG + H V DH +G
Sbjct: 296 RHRSHEEDDNDDDDVSTEYGHQAHRHQDHRKEEVEAVSGEHHHH-------VPDHRHQGH 348
Query: 116 VAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYK 174
++D+D + P E+EE E H P+ K + +++
Sbjct: 349 RDEEEDEDVSTERWHQGPQHVHHGLVDEEEEEEEITVQFGHYVASHQPRGHKSDEEDFQ 407
Score = 32.0 bits (71), Expect = 0.30
Identities = 40/207 (19%), Positives = 70/207 (33%), Gaps = 50/207 (24%)
Query: 8 HPHGVKRSASPDDDLGSSNWEAAD-------LGNEERKQKFLRLMGAGKKEHTGRLVIGD 60
H H R D+D+ + W + EE +++ G H R
Sbjct: 343 HRHQGHRDEEEDEDVSTERWHQGPQHVHHGLVDEEEEEEEITVQFGHYVASHQPR----G 398
Query: 61 HKSTS----------------HFRTGEEDKKINEELESQ---YQQSMDSKLSGRYRR--- 98
HKS H EED++++ EL Q ++QS + +G +R
Sbjct: 399 HKSDEEDFQDEYKTEVPHHHHHRVPREEDEEVSAELGHQAPSHRQSHQDEETGHGQRGSI 458
Query: 99 -----------------HCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSE 141
H SE E E + ++DD+ + + + S +
Sbjct: 459 KEMSHHPPGHTVVKDRSHLRKDDSEEEKEKEEDPGSHEEDDESSEQGEKGTHHGSRDQED 518
Query: 142 SEKEESAEELQAAEHPDEVEDPKNKKD 168
E EE L + +E ED + +++
Sbjct: 519 EEDEEEGHGLSLNQEEEEEEDKEEEEE 545
>gi|16445033 ACRC protein [Homo sapiens]
Length = 691
Score = 46.6 bits (109), Expect = 1e-05
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 105 SEVEDHDGEGDVAGDDDDDDDDSPDP-----ESPDDSESDSESEKEESAEELQAAEHPDE 159
SE D + A DD DD ++PD E+PDDS DSE+ + S + + + D+
Sbjct: 242 SEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDD 301
Query: 160 VEDPKNKKD 168
E P +K D
Sbjct: 302 SEAPDDKSD 310
Score = 44.7 bits (104), Expect = 5e-05
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 108 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 167
+D D D + D D DD S D E+PDDS DSE+ + S + + D+ E P +
Sbjct: 220 DDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSS 279
Query: 168 D 168
D
Sbjct: 280 D 280
Score = 44.3 bits (103), Expect = 6e-05
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 108 EDHDGEGDVAGDDDDD----DDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDP 163
+D + DV D DD DD S D E+PDDS DSE+ + S + +E PD+ D
Sbjct: 226 DDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDD----SEAPDDSSDD 281
Query: 164 KNKKDAKSN 172
D S+
Sbjct: 282 SEASDDSSD 290
Score = 43.9 bits (102), Expect = 8e-05
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 116 VAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 168
V DDD+DDD+ D E PDD+ DSE+ + S + ++ D+ E P + D
Sbjct: 122 VISDDDNDDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSD 174
Score = 43.9 bits (102), Expect = 8e-05
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 107 VEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNK 166
+ D D + D D + DD+S D E+PDD+ DSE+ + S + ++ D+ E P +
Sbjct: 123 ISDDDNDDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDN 182
Query: 167 KD 168
D
Sbjct: 183 SD 184
Score = 42.7 bits (99), Expect = 2e-04
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 105 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 164
SE D + + A DD+ DD D PD S D S+ +S+ ++++++ ++ PD+ D
Sbjct: 166 SEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDD---SDVPDDKSDDS 222
Query: 165 NKKDAKSN 172
+ D S+
Sbjct: 223 DVPDDSSD 230
Score = 42.4 bits (98), Expect = 2e-04
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 108 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 167
+D D D + D D DD S D + PDDS DSE+ + S + + D+ E P +
Sbjct: 210 DDSDVPDDKSDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSS 269
Query: 168 D 168
D
Sbjct: 270 D 270
Score = 42.4 bits (98), Expect = 2e-04
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 105 SEVEDHDGEGDVAGDDDDDDDDSPDP-----ESPDDSESDSES------EKEESAEELQA 153
S+V D + A DD DD ++PD E+PDDS DSE+ + E S +
Sbjct: 232 SDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDD 291
Query: 154 AEHPDEVEDPKNKKDAKSN 172
+E D+ D D KS+
Sbjct: 292 SEASDDSSDDSEAPDDKSD 310
Score = 42.0 bits (97), Expect = 3e-04
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 108 EDHDGEGDVAGDDDDD----DDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDP 163
+D+ + +V D+ DD DD+S D E+PDD+ DSE+ + S + ++ D+ + P
Sbjct: 130 DDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDVP 189
Query: 164 KNKKDAKSN 172
+ D S+
Sbjct: 190 DDNSDDSSD 198
Score = 42.0 bits (97), Expect = 3e-04
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 105 SEVEDHDGEGDVAGDDDDDDDDSPDP-----ESPDDSESDSESEKEESAEELQAAEHPDE 159
SE D + A DD DD ++PD E+ DDS DSE+ + S + + D+
Sbjct: 252 SEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDDSEAPDDKSDD 311
Query: 160 VEDPKNKKD 168
+ P++K D
Sbjct: 312 SDVPEDKSD 320
Score = 40.8 bits (94), Expect = 7e-04
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 106 EVEDHDGEGDVAGDDDDDDDDSPDP-----ESPDDSESDSESEKEESAEELQAAEHPDEV 160
EV D + + A DD+ DD ++PD E+PDD+ DSE+ + S + ++ D+
Sbjct: 137 EVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDS 196
Query: 161 EDPKNKKDAKSN 172
D + + N
Sbjct: 197 SDDNSDDSSDDN 208
Score = 40.4 bits (93), Expect = 9e-04
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 108 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 167
+D + D + D + DD S D E+PDD DS+ +++S + ++ D++E P +
Sbjct: 280 DDSEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNSDDLEVPVPAE 339
Query: 168 D 168
D
Sbjct: 340 D 340
Score = 40.0 bits (92), Expect = 0.001
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 108 EDHDGEGDVAGDDDDDDDDSPDPES-----PDDSESDSESEKEESAEELQAAEHPDEVED 162
+ D D + DD+ DD D PD +S PDDS DS+ + S + + D+ E
Sbjct: 195 DSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEA 254
Query: 163 PKNKKD 168
P + D
Sbjct: 255 PDDSSD 260
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 105 SEVEDHDGEGDVAGDDDDDDDDSPDPES-----PDDSESDSESEKEESAEELQAAEHPDE 159
SE D + + A DD+ DD ++PD S PDD+ DS + + + + ++ D+
Sbjct: 156 SEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSD----DNSDD 211
Query: 160 VEDPKNKKD 168
+ P +K D
Sbjct: 212 SDVPDDKSD 220
Score = 38.9 bits (89), Expect = 0.002
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 167
+D + D + D + DD S D E+ DDS DSE+ ++S + + D+ + P +
Sbjct: 270 DDSEAPDDSSDDSEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNS 329
Query: 168 D 168
D
Sbjct: 330 D 330
Score = 38.5 bits (88), Expect = 0.003
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 105 SEVEDHDGEGDVAGDDDDDD-----DDSPDPESPDDSESDSE--SEKEESAEELQAAEHP 157
SE D + + A DD+ DD D+S D E+PDD+ DS+ + + + + + +
Sbjct: 146 SEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSS 205
Query: 158 DEVEDPKNKKDAKSN 172
D+ D + D KS+
Sbjct: 206 DDNSDDSDVPDDKSD 220
Score = 37.4 bits (85), Expect = 0.007
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 105 SEVEDHDGEGDVAGDDDDD--DDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVED 162
S+V D D D + D+ DD DD+S D + PDD DS+ + S + + D+ E
Sbjct: 186 SDVPD-DNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSDDSDVPDDSSDDSEA 244
Query: 163 PKNKKD 168
P + D
Sbjct: 245 PDDSSD 250
Score = 36.6 bits (83), Expect = 0.012
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 108 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 167
+D+ + DV D+ DD D +S DD+ DS+ ++S + ++ PD+ D +
Sbjct: 180 DDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDD----SDVPDDSSDDSDVP 235
Query: 168 DAKSN 172
D S+
Sbjct: 236 DDSSD 240
Score = 29.6 bits (65), Expect = 1.5
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 108 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVED 162
ED + DV DD+ DD + P P +E S++EE E A D +D
Sbjct: 316 EDKSDDSDVP-DDNSDDLEVPVPAEDLCNEGQIASDEEELVEAAAAVSQHDSSDD 369
Score = 28.9 bits (63), Expect = 2.6
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 15/79 (18%)
Query: 108 EDHDGEGDVAGDDDD---------DDDDSPDPESPDDSE------SDSESEKEESAEELQ 152
ED EG +A D+++ D S D D E SD E+ E S +L
Sbjct: 339 EDLCNEGQIASDEEELVEAAAAVSQHDSSDDAGEQDLGENLSKPPSDPEANPEVSERKLP 398
Query: 153 AAEHPDEVEDPKNKKDAKS 171
E P V + K+ +K+
Sbjct: 399 TEEEPAPVVEQSGKRKSKT 417
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 45.4 bits (106), Expect = 3e-05
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 25 SNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQY 84
S W+ +E +K K H V KS S +D+ +E S
Sbjct: 565 SRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWV----KSLS-----PQDRAAYKEYISNK 615
Query: 85 QQSMDSKLSG---RYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDD----SE 137
++SM +KL G + R SE E+ D E + D+D++++D + +S +D SE
Sbjct: 616 RKSM-TKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSE 674
Query: 138 SDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKSSG 182
S SE E E+ E + E D+ ED +D +S SSG
Sbjct: 675 SSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSG 719
Score = 37.4 bits (85), Expect = 0.007
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Query: 37 RKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRY 96
+++ +L G K L KS S E++ +E+ E + ++ DS G
Sbjct: 615 KRKSMTKLRGPNPKSSRTTL---QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGD 671
Query: 97 RRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAE 149
E ED D + D+DDD+DD D ++ + S S S +S++
Sbjct: 672 SSESS-SEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 723
Score = 34.3 bits (77), Expect = 0.061
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 71 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDP 130
EED + +E+ E + ++ D + S ED +GD +DD+D+DD
Sbjct: 641 EEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDD---- 696
Query: 131 ESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN 165
D + D + + E ++ D + N
Sbjct: 697 ----DEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
Score = 30.8 bits (68), Expect = 0.68
Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 12/138 (8%)
Query: 14 RSASPDDDLGSSNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEED 73
+S SP D + + N+ + LR G + R + + +ED
Sbjct: 598 KSLSPQDRAAYKEY----ISNKRKSMTKLR----GPNPKSSRTTLQSKSESEEDDEEDED 649
Query: 74 KKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDD----DDSPD 129
+ +E E + S+ G SE D + E D DDD+DD D+ +
Sbjct: 650 DEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESE 709
Query: 130 PESPDDSESDSESEKEES 147
S S S S+ + +
Sbjct: 710 GSSSSSSSSGDSSDSDSN 727
Score = 30.8 bits (68), Expect = 0.68
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 106 EVEDHDGEGDVAGDD------DDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDE 159
E +D +G+ G D +D+ +D + E D+ E D E + E+ E + +
Sbjct: 657 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 716
Query: 160 VEDPKNKKDA 169
+ D+
Sbjct: 717 SSGDSSDSDS 726
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 45.4 bits (106), Expect = 3e-05
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 25 SNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQY 84
S W+ +E +K K H V KS S +D+ +E S
Sbjct: 565 SRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWV----KSLS-----PQDRAAYKEYISNK 615
Query: 85 QQSMDSKLSG---RYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDD----SE 137
++SM +KL G + R SE E+ D E + D+D++++D + +S +D SE
Sbjct: 616 RKSM-TKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSE 674
Query: 138 SDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKSSG 182
S SE E E+ E + E D+ ED +D +S SSG
Sbjct: 675 SSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSG 719
Score = 37.4 bits (85), Expect = 0.007
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Query: 37 RKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRY 96
+++ +L G K L KS S E++ +E+ E + ++ DS G
Sbjct: 615 KRKSMTKLRGPNPKSSRTTL---QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGD 671
Query: 97 RRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAE 149
E ED D + D+DDD+DD D ++ + S S S +S++
Sbjct: 672 SSESS-SEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 723
Score = 34.3 bits (77), Expect = 0.061
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 71 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDP 130
EED + +E+ E + ++ D + S ED +GD +DD+D+DD
Sbjct: 641 EEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDD---- 696
Query: 131 ESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN 165
D + D + + E ++ D + N
Sbjct: 697 ----DEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
Score = 30.8 bits (68), Expect = 0.68
Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 12/138 (8%)
Query: 14 RSASPDDDLGSSNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEED 73
+S SP D + + N+ + LR G + R + + +ED
Sbjct: 598 KSLSPQDRAAYKEY----ISNKRKSMTKLR----GPNPKSSRTTLQSKSESEEDDEEDED 649
Query: 74 KKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDD----DDSPD 129
+ +E E + S+ G SE D + E D DDD+DD D+ +
Sbjct: 650 DEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESE 709
Query: 130 PESPDDSESDSESEKEES 147
S S S S+ + +
Sbjct: 710 GSSSSSSSSGDSSDSDSN 727
Score = 30.8 bits (68), Expect = 0.68
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 106 EVEDHDGEGDVAGDD------DDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDE 159
E +D +G+ G D +D+ +D + E D+ E D E + E+ E + +
Sbjct: 657 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 716
Query: 160 VEDPKNKKDA 169
+ D+
Sbjct: 717 SSGDSSDSDS 726
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 45.4 bits (106), Expect = 3e-05
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 25 SNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQY 84
S W+ +E +K K H V KS S +D+ +E S
Sbjct: 602 SRWQRISQSQKEHYKKLAEEQQKQYKVHLDLWV----KSLS-----PQDRAAYKEYISNK 652
Query: 85 QQSMDSKLSG---RYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDD----SE 137
++SM +KL G + R SE E+ D E + D+D++++D + +S +D SE
Sbjct: 653 RKSM-TKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSE 711
Query: 138 SDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKSSG 182
S SE E E+ E + E D+ ED +D +S SSG
Sbjct: 712 SSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSG 756
Score = 37.4 bits (85), Expect = 0.007
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 4/113 (3%)
Query: 37 RKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRY 96
+++ +L G K L KS S E++ +E+ E + ++ DS G
Sbjct: 652 KRKSMTKLRGPNPKSSRTTL---QSKSESEEDDEEDEDDEDEDEEEEDDENGDSSEDGGD 708
Query: 97 RRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAE 149
E ED D + D+DDD+DD D ++ + S S S +S++
Sbjct: 709 SSESS-SEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSSSGDSSD 760
Score = 34.3 bits (77), Expect = 0.061
Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 8/95 (8%)
Query: 71 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDP 130
EED + +E+ E + ++ D + S ED +GD +DD+D+DD
Sbjct: 678 EEDDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDD---- 733
Query: 131 ESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN 165
D + D + + E ++ D + N
Sbjct: 734 ----DEDDDEDEDNESEGSSSSSSSSGDSSDSDSN 764
Score = 30.8 bits (68), Expect = 0.68
Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 12/138 (8%)
Query: 14 RSASPDDDLGSSNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEED 73
+S SP D + + N+ + LR G + R + + +ED
Sbjct: 635 KSLSPQDRAAYKEY----ISNKRKSMTKLR----GPNPKSSRTTLQSKSESEEDDEEDED 686
Query: 74 KKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDD----DDSPD 129
+ +E E + S+ G SE D + E D DDD+DD D+ +
Sbjct: 687 DEDEDEEEEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESE 746
Query: 130 PESPDDSESDSESEKEES 147
S S S S+ + +
Sbjct: 747 GSSSSSSSSGDSSDSDSN 764
Score = 30.8 bits (68), Expect = 0.68
Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 6/70 (8%)
Query: 106 EVEDHDGEGDVAGDD------DDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDE 159
E +D +G+ G D +D+ +D + E D+ E D E + E+ E + +
Sbjct: 694 EEDDENGDSSEDGGDSSESSSEDESEDGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSS 753
Query: 160 VEDPKNKKDA 169
+ D+
Sbjct: 754 SSGDSSDSDS 763
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 45.1 bits (105), Expect = 3e-05
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 108 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNK 166
ED D E D +DDDDD+D D DD E D E E+EE E ++ A + E K K
Sbjct: 234 EDEDEEEDDEDEDDDDDEDDED----DDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQK 288
Score = 40.4 bits (93), Expect = 9e-04
Identities = 24/98 (24%), Positives = 42/98 (42%)
Query: 71 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDP 130
++D + +EE + + D + SE ED + + D DDDD++DDS +
Sbjct: 150 DDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEE 209
Query: 131 ESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 168
++ K + AE DE ED +++ D
Sbjct: 210 AMETTPAKGKKAAKVVPVKAKNVAEDEDEEEDDEDEDD 247
Score = 39.7 bits (91), Expect = 0.001
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 12/77 (15%)
Query: 106 EVEDHDGEGDVAGDDDDDDDD-----------SPDPESPD-DSESDSESEKEESAEELQA 153
E ED D E D D+D+D+D+ + P S D D E D + E ++ EE +
Sbjct: 147 EEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDS 206
Query: 154 AEHPDEVEDPKNKKDAK 170
E E K KK AK
Sbjct: 207 EEEAMETTPAKGKKAAK 223
Score = 39.7 bits (91), Expect = 0.001
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 115 DVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAK 170
+VA D+D+++DD + + D+ + D + E +E EE + E E + K+ AK
Sbjct: 231 NVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAK 286
Score = 35.0 bits (79), Expect = 0.036
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 111 DGEGDVAGDDDDDD-DDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 168
+G+ D D+++ DDS + E D+ E + E E E +A + AA E ED ++ +D
Sbjct: 136 NGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDEDDEDDED 194
Score = 33.5 bits (75), Expect = 0.10
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 8/45 (17%)
Query: 106 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEE 150
E +D D + D DD+DDDD +D E + E E+EE +E
Sbjct: 239 EEDDEDEDDDDDEDDEDDDD--------EDDEEEEEEEEEEPVKE 275
Score = 33.5 bits (75), Expect = 0.10
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 106 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAE 155
E ED D + D DDD+DD++ + E + + K+E A++ A E
Sbjct: 243 EDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQKAAPE 292
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 44.7 bits (104), Expect = 5e-05
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 74 KKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESP 133
++ +EE + S++S G + H ED + D DDDDDDDD D +
Sbjct: 228 QRTDEETTDNQEGSVESSEEGEDQEH--------EDDGEDEDDEDDDDDDDDDDDDDDED 279
Query: 134 DDSESDSESEKEE 146
D+ E D E E ++
Sbjct: 280 DEDEEDGEEENQK 292
Score = 41.6 bits (96), Expect = 4e-04
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 106 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQ 152
E ED + E D G+D+DD+DD D + DD + + + ++E+ EE Q
Sbjct: 247 EGEDQEHEDD--GEDEDDEDDDDDDDDDDDDDDEDDEDEEDGEEENQ 291
Score = 30.8 bits (68), Expect = 0.68
Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 113 EGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 167
E G+D + +DD D + DD + D + + ++ ++ E ++ E+ K+
Sbjct: 243 ESSEEGEDQEHEDDGEDEDDEDDDDDDDDDDDDDDEDD----EDEEDGEEENQKR 293
Score = 30.4 bits (67), Expect = 0.89
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 73 DKKINEELESQYQQSMDSKLSGRYRRHC--GLG-FSEVEDHDGEGDVAGDDDDDDDDSPD 129
DK I E+ Q+ D K R R LG F+E E+ + G D
Sbjct: 174 DKLITNTAEAVLQKMDDMKKMRRQRMRELEDLGVFNETEESNLNMYTRGKQKDI------ 227
Query: 130 PESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 168
+ D+ +D++ ES+EE + EH D+ ED ++ D
Sbjct: 228 -QRTDEETTDNQEGSVESSEEGEDQEHEDDGEDEDDEDD 265
>gi|42740903 MTERF domain containing 2 [Homo sapiens]
Length = 381
Score = 43.9 bits (102), Expect = 8e-05
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 69 TGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSP 128
T E+ ++ ++L ++ ++ +S S R E ED D E D DD+D+DDD
Sbjct: 308 TSVEEFQVFKKLLAREEEESESSTSDDKRA----SLDEDEDDDDEEDNDEDDNDEDDDDE 363
Query: 129 DPESPDDSESDSESEKEE 146
D + +D++ D + ++EE
Sbjct: 364 DDDEAEDNDEDEDDDEEE 381
Score = 39.3 bits (90), Expect = 0.002
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 108 EDHDGEGDVAGD-----DDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVE 161
E+ + E + D D+D+DDD + DD++ D + E ++ AE+ E DE E
Sbjct: 323 EEEESESSTSDDKRASLDEDEDDDDEEDNDEDDNDEDDDDEDDDEAEDNDEDEDDDEEE 381
Score = 33.1 bits (74), Expect = 0.14
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 105 SEVEDHDGEGDVAGDDDDDDD-DSPDPESPDDSESDSESEKEESAEE 150
S +D D DDDD++D D D + DD E D E+E + E+
Sbjct: 330 STSDDKRASLDEDEDDDDEEDNDEDDNDEDDDDEDDDEAEDNDEDED 376
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 43.9 bits (102), Expect = 8e-05
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 21/121 (17%)
Query: 70 GEEDKKINEELESQ-YQQSMDSKLSGRYRRHCGLGFSEVEDHDG----EGDVAGDDDDDD 124
G ED EE E + Y + D G + ED +G E ++ +D+DDD
Sbjct: 95 GTEDMDEKEEDEGEEYSEDNDEP-----------GDEDEEDEEGDREEEEEIEEEDEDDD 143
Query: 125 DDSPDPESPDDSESDSESEKEESAEE-----LQAAEHPDEVEDPKNKKDAKSNYKMMFVK 179
+D D E ++ E + E E+EE E + E N D NY + K
Sbjct: 144 EDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNNDEYDNYDELVAK 203
Query: 180 S 180
S
Sbjct: 204 S 204
Score = 27.7 bits (60), Expect = 5.7
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 122 DDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 168
D+ DDS E D+ E D E E +E + DE D + +++
Sbjct: 88 DECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEE 134
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 43.9 bits (102), Expect = 8e-05
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 105 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 164
+E E+ D E + DD+DD+ D ES +SESD+E +EE ++ E + E
Sbjct: 608 NEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKDQDESDSDTEG-- 665
Query: 165 NKKDAKSNYKMMFVKS 180
K K N VKS
Sbjct: 666 EKTSMKLNKTTSSVKS 681
Score = 41.2 bits (95), Expect = 5e-04
Identities = 19/79 (24%), Positives = 37/79 (46%)
Query: 105 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 164
S + D D DD+++D++ + + DDS+S+S+S E E + + D+ +D
Sbjct: 600 SSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKDQDES 659
Query: 165 NKKDAKSNYKMMFVKSSGS 183
+ M K++ S
Sbjct: 660 DSDTEGEKTSMKLNKTTSS 678
Score = 40.8 bits (94), Expect = 7e-04
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 68 RTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDS 127
+TG+ D +L + Q + + GR RR G +D D + D GD+DD+D++
Sbjct: 1262 KTGKRDTSGGIDLGEE-QHPLGTPTPGRKRRRKGGDSDYDDDDDDDSDDQGDEDDEDEED 1320
Query: 128 PDP---ESPDDSESDSESEKEESAEELQ 152
+ + D E + E ++ S EEL+
Sbjct: 1321 KEDKKGKKTDICEDEDEGDQAASVEELE 1348
Score = 37.4 bits (85), Expect = 0.007
Identities = 15/66 (22%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 105 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAE-ELQAAEHPDEVEDP 163
S++ D D+++DD++ + + DD DS+SE + ++E + + +E D+ +
Sbjct: 596 SDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKD 655
Query: 164 KNKKDA 169
+++ D+
Sbjct: 656 QDESDS 661
Score = 33.1 bits (74), Expect = 0.14
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 124 DDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKS 171
D D P S DSE +E E+E+ EE + + DE +D +++ D+ S
Sbjct: 595 DSDIP---SSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNS 639
Score = 32.3 bits (72), Expect = 0.23
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 23/122 (18%)
Query: 58 IGDHKSTSHFRTGEEDKKINEEL-ESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDG---- 112
+G KSTS +G ++K N+E ++Q + K+ + R + S D D
Sbjct: 197 MGQTKSTS---SGGGNRKCNQEQSKNQPLDARVDKIKDKKPRKKAMESSSNSDSDSGTSS 253
Query: 113 ----------EGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVED 162
+ D +D++++D S + DDS+S+SE++ + + + L + D
Sbjct: 254 DTSSEGISSSDSDDLEEDEEEEDQSIEESEDDDSDSESEAQHKSNNQVLLHG-----ISD 308
Query: 163 PK 164
PK
Sbjct: 309 PK 310
Score = 31.6 bits (70), Expect = 0.40
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 81 ESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDS-------PDPESP 133
+S S DS+ S E +D D E D + + D + +S D +
Sbjct: 595 DSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDK 654
Query: 134 DDSESDSESEKEESAEEL 151
D ESDS++E E+++ +L
Sbjct: 655 DQDESDSDTEGEKTSMKL 672
Score = 31.6 bits (70), Expect = 0.40
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 109 DHDGEGDVAGDDDDDD----DDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPK 164
D D +D ++D D+ D E +D ESD + +S E +E +D K
Sbjct: 595 DSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDK 654
Query: 165 NKKDAKSN 172
++ ++ S+
Sbjct: 655 DQDESDSD 662
>gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens]
Length = 259
Score = 43.5 bits (101), Expect = 1e-04
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 69 TGEEDKKINEELESQYQQSMDSKL-SGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDS 127
+G+ + E+ ES+ ++ D KL S +R G S+V + +A D+DDDDDD
Sbjct: 112 SGQHLVAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVK--LAADEDDDDDDE 169
Query: 128 PDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKSSG 182
D + DD + + E EE A ++ K+ ++ K + +S G
Sbjct: 170 EDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKG 224
>gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens]
Length = 294
Score = 43.5 bits (101), Expect = 1e-04
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 69 TGEEDKKINEELESQYQQSMDSKL-SGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDS 127
+G+ + E+ ES+ ++ D KL S +R G S+V + +A D+DDDDDD
Sbjct: 112 SGQHLVAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVK--LAADEDDDDDDE 169
Query: 128 PDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKSSG 182
D + DD + + E EE A ++ K+ ++ K + +S G
Sbjct: 170 EDDDEDDDDDDFDDEEAEEKAPVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKG 224
>gi|111607441 hypothetical protein LOC400506 [Homo sapiens]
Length = 458
Score = 43.5 bits (101), Expect = 1e-04
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 27 WEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQ 86
W+ A NE++K KFLRLMG K + + G KK + L+ Q+
Sbjct: 362 WDTAGFENEDQKLKFLRLMGGFKNLSPSFSRPASTIARPNMALG---KKAADSLQQNLQR 418
Query: 87 SMDSKLSGRYRRHCGLGFS 105
D +S +Y R GLGFS
Sbjct: 419 DYDRAMSWKYSRGAGLGFS 437
>gi|24429572 TBP-associated factor RNA polymerase 1-like [Homo
sapiens]
Length = 1826
Score = 43.5 bits (101), Expect = 1e-04
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 103 GFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESA---------EELQA 153
G + + D + DV G DD+++D P P +P+ + D E+E + E+L
Sbjct: 1707 GQGRLGEEDSDVDVEGYDDEEEDGKPKPPAPEGGDGDLADEEEGTVQQPEASVLYEDLLI 1766
Query: 154 AEHPDEVEDPKNKKDAKSNYKMMFVKSSGS 183
+E D+ ED + ++ + + + + SGS
Sbjct: 1767 SEGEDDEEDAGSDEEGDNPFSAIQLSESGS 1796
>gi|55769587 probable nucleolar complex protein 14 [Homo sapiens]
Length = 857
Score = 43.1 bits (100), Expect = 1e-04
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 14/79 (17%)
Query: 72 EDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPE 131
+D K+N E + Q +QS ++ S+ E ++ EGD +G +D ++ DSPD
Sbjct: 334 KDGKMNVEEDVQEEQSKEA--------------SDPESNEEEGDSSGGEDTEESDSPDSH 379
Query: 132 SPDDSESDSESEKEESAEE 150
+S +SE E E+ A+E
Sbjct: 380 LDLESNVESEEENEKPAKE 398
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 42.7 bits (99), Expect = 2e-04
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 28 EAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQS 87
E D G E ++ R +KE G + G+ + R EE++ EE E + ++
Sbjct: 789 EEGDQGEGEEEETEGR---GEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEE 845
Query: 88 MDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEE- 146
G G G E E +GEG+ G++ + + + + E + E + E E+EE
Sbjct: 846 -----EGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEG 900
Query: 147 --SAEELQAAEHPDEVEDPKNKKDAK 170
EE E +E + K +++ +
Sbjct: 901 EGEGEEEGEGEGEEEEGEGKGEEEGE 926
Score = 42.0 bits (97), Expect = 3e-04
Identities = 36/164 (21%), Positives = 74/164 (45%), Gaps = 12/164 (7%)
Query: 19 DDDLGSSNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGE-EDKKIN 77
+D G E + EE + + G G++E G G+ + GE E+++
Sbjct: 942 EDGEGEGEEEEGEWEGEEEEGE-----GEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGE 996
Query: 78 EELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSE 137
EE E + + + + G G EVE +GEG+ G++++ +++ + E + E
Sbjct: 997 EEGEEEGEGEEEGEGEGEEEEE-GEVEGEVEGEEGEGE--GEEEEGEEEGEEREKEGEGE 1053
Query: 138 SDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVKSS 181
+ + +EE EE ++ + E+ ++D + K+ +K S
Sbjct: 1054 ENRRNREEEEEEE---GKYQETGEEENERQDGEEYKKVSKIKGS 1094
Score = 40.8 bits (94), Expect = 7e-04
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 10/140 (7%)
Query: 33 GNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKL 92
G EE + + G GK E G G+ + GE+ + EE E +++
Sbjct: 904 GEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWE------- 956
Query: 93 SGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEK--EESAEE 150
G G G E E EG+ G++++ + + + E ++ E + E E+ E EE
Sbjct: 957 -GEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEE 1015
Query: 151 LQAAEHPDEVEDPKNKKDAK 170
+ E EVE + + + +
Sbjct: 1016 EEEGEVEGEVEGEEGEGEGE 1035
Score = 37.7 bits (86), Expect = 0.006
Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 18/117 (15%)
Query: 46 GAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFS 105
G GK E G G+ + GEE + EE E + + + G G
Sbjct: 854 GEGKGEEEGEEGEGEEE-------GEEGEGEGEEEEGEGEGEEE-----------GEGEG 895
Query: 106 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVED 162
E E+ +GEG+ G+ + ++++ + E + E E+EE E + E E E+
Sbjct: 896 EEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEE 952
Score = 36.6 bits (83), Expect = 0.012
Identities = 35/179 (19%), Positives = 70/179 (39%), Gaps = 28/179 (15%)
Query: 6 ESHPHGVKRSASPDDDLGSSNW--EAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKS 63
E P G + G+ +W E + G +++ + + G G+KE K
Sbjct: 648 EDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELA-------EKE 700
Query: 64 TSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDD 123
R GEE ++ E Q +++ + + G E E +GE + ++++
Sbjct: 701 EWKKRDGEEQEQKEREQGHQKERNQEMEEGG-----------EEEHGEGEEEEGDREEEE 749
Query: 124 DDDSPDPESPDDSESDSESEKEE--------SAEELQAAEHPDEVEDPKNKKDAKSNYK 174
+ + E + E + E EKEE + +E + E D+ E + + + + K
Sbjct: 750 EKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEK 808
Score = 33.9 bits (76), Expect = 0.080
Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 29/150 (19%)
Query: 19 DDDLGSSNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINE 78
+++ G E D EE K+ G GK+E G V G+ + R EE E
Sbjct: 732 EEEHGEGEEEEGDREEEEEKE------GEGKEEGEGEEVEGEREKEEGERKKEERAGKEE 785
Query: 79 ELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSES 138
+ E + Q G E E+ +G G+ + ++ + E + E
Sbjct: 786 KGEEEGDQ----------------GEGEEEETEGRGE-------EKEEGGEVEGGEVEEG 822
Query: 139 DSESEKEESAEELQAAEHPDEVEDPKNKKD 168
E E+EE E + E E E+ + +++
Sbjct: 823 KGEREEEEEEGEGEEEEGEGEEEEGEGEEE 852
Score = 33.9 bits (76), Expect = 0.080
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 11/146 (7%)
Query: 6 ESHPHGVKRSASPDDDLGSSNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTS 65
E G + +++ G E + EE ++ G+ E G G+ +
Sbjct: 830 EEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEE-------GEGEEEGEEGEGEGEEEE 882
Query: 66 HFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDD 125
GEE+ + E E + + + + G G G E E +GEG+ G++++ +
Sbjct: 883 GEGEGEEEGE-GEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGE--GEEEEGEG 939
Query: 126 DSPDPESP-DDSESDSESEKEESAEE 150
+ D E ++ E + E E+EE E
Sbjct: 940 EGEDGEGEGEEEEGEWEGEEEEGEGE 965
Score = 29.6 bits (65), Expect = 1.5
Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 3/121 (2%)
Query: 33 GNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKL 92
G EE + G G+ E G+ + E + K EE E + + +
Sbjct: 878 GEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEG 937
Query: 93 SGRYRRHCGLGFSEVEDHDG---EGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAE 149
G G G E + +G EG+ G+++ + + ++ E + E E+EE E
Sbjct: 938 EGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEE 997
Query: 150 E 150
E
Sbjct: 998 E 998
>gi|40353734 nucleophosmin 1 isoform 2 [Homo sapiens]
Length = 265
Score = 42.4 bits (98), Expect = 2e-04
Identities = 26/103 (25%), Positives = 43/103 (41%)
Query: 69 TGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSP 128
+G+ + E+ ES+ ++ D KL + G A +DDDDDD+
Sbjct: 112 SGQHLVAVEEDAESEDEEEEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEED 171
Query: 129 DPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKS 171
D E DD + D E +E++ + + + PK K S
Sbjct: 172 DDEDDDDDDFDDEEAEEKAPVKKGQESFKKQEKTPKTPKGPSS 214
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 42.0 bits (97), Expect = 3e-04
Identities = 42/169 (24%), Positives = 66/169 (39%), Gaps = 27/169 (15%)
Query: 1 MSAARESHPH-GVKRSASPDDDLGSSNWEAADLG-------NEERKQKFLRLMGAGKKEH 52
+ AA E PH G PD+ G+ + G E +QKFL H
Sbjct: 5 VGAAFEELPHDGTCDECEPDEAPGAEE-VCRECGFCYCRRHAEAHRQKFL-------SHH 56
Query: 53 TGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDG 112
V G T GE K E++ + ++ ++S+ G + +
Sbjct: 57 LAEYVHGSQAWTPP-ADGEGAGKEEAEVKVEQEREIESEA----------GEESESEEES 105
Query: 113 EGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVE 161
E + + +++ +D D ES +DSE + E E+E AEE E E E
Sbjct: 106 ESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQEEGESEAE 154
Score = 36.6 bits (83), Expect = 0.012
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 106 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN 165
E+E GE + ++ + +++S E+ ++SE +S+ E EE +EE E E E+ N
Sbjct: 90 EIESEAGEESESEEESESEEES---ETEEESEDESDEESEEDSEEEMEDEQESEAEE-DN 145
Query: 166 KKDAKS 171
+++ +S
Sbjct: 146 QEEGES 151
Score = 32.3 bits (72), Expect = 0.23
Identities = 16/70 (22%), Positives = 35/70 (50%)
Query: 99 HCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPD 158
H ++ D +G G + + + + E+ ++SES+ ESE EE +E + +E
Sbjct: 62 HGSQAWTPPADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDES 121
Query: 159 EVEDPKNKKD 168
+ E ++ ++
Sbjct: 122 DEESEEDSEE 131
Score = 32.0 bits (71), Expect = 0.30
Identities = 12/54 (22%), Positives = 29/54 (53%)
Query: 119 DDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSN 172
+ + ++ + ES + ES++E E E+ ++E + +E+ED + + + N
Sbjct: 92 ESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDN 145
Score = 31.2 bits (69), Expect = 0.52
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 111 DGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAK 170
DGEG AG ++ + + E +SE+ ESE EE +E + +E +E ED +++ +
Sbjct: 72 DGEG--AGKEEAEV--KVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEE 127
Query: 171 SNYKMM 176
+ + M
Sbjct: 128 DSEEEM 133
Score = 30.8 bits (68), Expect = 0.68
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 22/121 (18%)
Query: 46 GAGKKEHTGRLV--------IGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYR 97
GAGK+E ++ G+ + EE+ + EE E + + +
Sbjct: 75 GAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEED------ 128
Query: 98 RHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHP 157
SE E D + A +D+ ++ +S + E ++ES+ + E E AE + + P
Sbjct: 129 -------SEEEMEDEQESEAEEDNQEEGES-EAEGETEAESEFDPEIEMEAERVAKRKCP 180
Query: 158 D 158
D
Sbjct: 181 D 181
Score = 29.6 bits (65), Expect = 1.5
Identities = 19/100 (19%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 71 EEDKKINEEL--ESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSP 128
E++++I E ES+ ++ +S+ E + D E ++ + + + ++
Sbjct: 86 EQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDN 145
Query: 129 DPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 168
E ++E ++E+E E E AE + + P + D
Sbjct: 146 QEEGESEAEGETEAESEFDPEIEMEAERVAKRKCPDHGLD 185
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 42.0 bits (97), Expect = 3e-04
Identities = 19/75 (25%), Positives = 39/75 (52%)
Query: 86 QSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKE 145
QS++ S + G+ E ED + E + +++D++++ + E ++ E + E E+E
Sbjct: 238 QSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE 297
Query: 146 ESAEELQAAEHPDEV 160
E EE + PD +
Sbjct: 298 EEEEEEEEEAAPDVI 312
Score = 39.7 bits (91), Expect = 0.001
Identities = 16/62 (25%), Positives = 36/62 (58%)
Query: 108 EDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKK 167
E +G ++ +++D++++ + E +D E + E E+EE EE + E +E E+ + ++
Sbjct: 247 ESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 306
Query: 168 DA 169
A
Sbjct: 307 AA 308
Score = 26.9 bits (58), Expect = 9.8
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 119 DDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKD 168
+D ++ S E D E E+EE EE E +E E+ + +++
Sbjct: 241 EDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEE 290
>gi|10835067 autoantigen La [Homo sapiens]
Length = 408
Score = 41.6 bits (96), Expect = 4e-04
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 11/129 (8%)
Query: 38 KQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDS-KLSGRY 96
K+K +G K + G L + + + T GE +K+ +++ Q+S++ K GR
Sbjct: 276 KEKAKEALGKAKDANNGNLQLRNKEVTWEVLEGEVEKEALKKIIEDQQESLNKWKSKGRR 335
Query: 97 RRHCGLGFSEVEDHDGEGDV---------AGDDDDDDDDSPDPESPDDSESDSESEKEES 147
+ G G + G+G V A DD+ D+ D P + E++KEE
Sbjct: 336 FKGKGKGNKAAQPGSGKGKVQFQGKKTKFASDDEHDEHDENGATGPV-KRAREETDKEEP 394
Query: 148 AEELQAAEH 156
A + Q E+
Sbjct: 395 ASKQQKTEN 403
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 41.6 bits (96), Expect = 4e-04
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 117 AGDDDDDDDDSPDPESPDDSESDSE---SEKEESAEELQAAEHPDEVEDPKNKKDA 169
A DD+DD++S + E ++ E + E SE+EE E++Q + DE ED + + A
Sbjct: 433 AETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAA 488
Score = 29.3 bits (64), Expect = 2.0
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 129 DPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSN 172
+ + DD ESD E E+EE EE + A +E ED + ++ + +
Sbjct: 434 ETDDEDDEESDEE-EEEEEEEEEEEATDSEEEEDLEQMQEGQED 476
Score = 27.3 bits (59), Expect = 7.5
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 106 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN 165
E E+ + E + A D ++++D E +D E E E+EE+A + P N
Sbjct: 447 EEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEE--EDEEEEAAAGKDGDKSPMSSLQISN 504
Query: 166 KKDAKSNYKMMFVKSSG 182
+K+ + ++ +SSG
Sbjct: 505 EKNLEPGKQIS--RSSG 519
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 41.6 bits (96), Expect = 4e-04
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 117 AGDDDDDDDDSPDPESPDDSESDSE---SEKEESAEELQAAEHPDEVEDPKNKKDA 169
A DD+DD++S + E ++ E + E SE+EE E++Q + DE ED + + A
Sbjct: 433 AETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAA 488
Score = 29.3 bits (64), Expect = 2.0
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 129 DPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSN 172
+ + DD ESD E E+EE EE + A +E ED + ++ + +
Sbjct: 434 ETDDEDDEESDEE-EEEEEEEEEEEATDSEEEEDLEQMQEGQED 476
Score = 27.3 bits (59), Expect = 7.5
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 106 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN 165
E E+ + E + A D ++++D E +D E E E+EE+A + P N
Sbjct: 447 EEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEE--EDEEEEAAAGKDGDKSPMSSLQISN 504
Query: 166 KKDAKSNYKMMFVKSSG 182
+K+ + ++ +SSG
Sbjct: 505 EKNLEPGKQIS--RSSG 519
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 41.6 bits (96), Expect = 4e-04
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 117 AGDDDDDDDDSPDPESPDDSESDSE---SEKEESAEELQAAEHPDEVEDPKNKKDA 169
A DD+DD++S + E ++ E + E SE+EE E++Q + DE ED + + A
Sbjct: 445 AETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAA 500
Score = 29.3 bits (64), Expect = 2.0
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 129 DPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSN 172
+ + DD ESD E E+EE EE + A +E ED + ++ + +
Sbjct: 446 ETDDEDDEESDEE-EEEEEEEEEEEATDSEEEEDLEQMQEGQED 488
Score = 27.3 bits (59), Expect = 7.5
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 106 EVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN 165
E E+ + E + A D ++++D E +D E E E+EE+A + P N
Sbjct: 459 EEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEE--EDEEEEAAAGKDGDKSPMSSLQISN 516
Query: 166 KKDAKSNYKMMFVKSSG 182
+K+ + ++ +SSG
Sbjct: 517 EKNLEPGKQIS--RSSG 531
>gi|20270337 Leo1, Paf1/RNA polymerase II complex component, homolog
[Homo sapiens]
Length = 666
Score = 41.6 bits (96), Expect = 4e-04
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 71 EEDKKINEELESQYQQSMDSK---LSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDS 127
+EDK N + + + Q + D + LS R+ L E + D E VA D+DD+ +S
Sbjct: 172 DEDKLQNSDDDEKMQNTDDEERPQLSDDERQQ--LSEEEKANSDDERPVASDNDDEKQNS 229
Query: 128 PDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKS 171
D E P SD E + E QA++ D + ++D KS
Sbjct: 230 DDEEQP--QLSDEEKMQNSDDERPQASDEEHRHSDDEEEQDHKS 271
Score = 31.6 bits (70), Expect = 0.40
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 13/114 (11%)
Query: 70 GEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPD 129
G+ + N+EL DS+ G SE D+ E D +D+D D
Sbjct: 51 GDSGQPSNKELFGD-----DSEDEGASHHSGSDNHSERSDNRSEASERSDHEDNDPSDVD 105
Query: 130 PESPDDSESDSESEKEES--------AEELQAAEHPDEVEDPKNKKDAKSNYKM 175
S ++ +D E E S AE + A DE ++K D + K+
Sbjct: 106 QHSGSEAPNDDEDEGHRSDGGSHHSEAEGSEKAHSDDEKWGREDKSDQSDDEKI 159
Score = 29.3 bits (64), Expect = 2.0
Identities = 42/168 (25%), Positives = 60/168 (35%), Gaps = 13/168 (7%)
Query: 15 SASPDDDLGSSNWEAADLGNEERKQKFLRLMGAGKKE---HTGRLVIGDHKSTSHFRTGE 71
S + D+ S + E L +EE+ Q E H+ DHKS S +
Sbjct: 220 SDNDDEKQNSDDEEQPQLSDEEKMQNSDDERPQASDEEHRHSDDEEEQDHKSESARGSDS 279
Query: 72 EDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPE 131
ED E L + + ++ S S D G D D +D P P
Sbjct: 280 ED----EVLRMKRKNAIASDSEADSDTEVPKDNSGTMDLFGGADDISSGSDGEDKPPTPG 335
Query: 132 SPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSNYKMMFVK 179
P D + ++EE E EVE PK D ++ + FVK
Sbjct: 336 QPVDENGLPQDQQEEE----PIPETRIEVEIPKVNTDLGND--LYFVK 377
Score = 28.9 bits (63), Expect = 2.6
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 115 DVAGDDDDDDDDSPDPESPDDSESDSE---SEKEESAEELQAAEHPDEVEDPKNKK 167
D+ G D D + + D +S DS+SD E S S E E D + P NK+
Sbjct: 6 DLFGSDADSEAERKDSDSGSDSDSDQENAASGSNASGSESDQDERGDSGQ-PSNKE 60
Score = 27.3 bits (59), Expect = 7.5
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 109 DHDGEGDVAGDDDDD--DDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNK 166
D D GD + + DDS D + S SD+ SE+ ++ E A+E D ++ +
Sbjct: 46 DQDERGDSGQPSNKELFGDDSEDEGASHHSGSDNHSERSDNRSE--ASERSDHEDNDPSD 103
Query: 167 KDAKS 171
D S
Sbjct: 104 VDQHS 108
Score = 27.3 bits (59), Expect = 7.5
Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 10/124 (8%)
Query: 47 AGKKEHTGRLVIGDHKSTSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSE 106
+G H+ R D++S + R+ ED ++ + ++ + +R G SE
Sbjct: 75 SGSDNHSER---SDNRSEASERSDHEDNDPSDVDQHSGSEAPNDDEDEGHRSDGGSHHSE 131
Query: 107 VEDHDGEGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAE--ELQAAEHPDEVEDPK 164
E G DD+ D D E S+ EE A+ + ++ D+ E +
Sbjct: 132 AE-----GSEKAHSDDEKWGREDKSDQSDDEKIQNSDDEERAQGSDEDKLQNSDDDEKMQ 186
Query: 165 NKKD 168
N D
Sbjct: 187 NTDD 190
>gi|4557509 cylicin 2 [Homo sapiens]
Length = 348
Score = 41.2 bits (95), Expect = 5e-04
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 23/126 (18%)
Query: 63 STSHFRTGEEDKKINEELESQYQQSMDSKL-SGRYRRHCGLG-FSEVEDHDGEGDVAGDD 120
S S + G++D K +++E ++ +D+K S + ++ G S E D +G G
Sbjct: 130 SESELKQGKKDSKKGKDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATESEDEKG---GAK 186
Query: 121 DDDDDDSPDPESPDDSESDSESEK-----------------EESAEELQAAEHPDEVEDP 163
D+ D D DS ++SE EK ++SA ELQA + DE +D
Sbjct: 187 KDNKKDKKDSNKGKDSATESEGEKGGTEKDSKKGKKDSKKGKDSAIELQAVK-ADEKKDE 245
Query: 164 KNKKDA 169
KKDA
Sbjct: 246 DGKKDA 251
Score = 37.0 bits (84), Expect = 0.009
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 15/84 (17%)
Query: 106 EVEDHDGEGDVAGDDDDDD---------DDSPDPESPDDSESDS------ESEKEESAEE 150
E +D DG+ D D+ D D + P ++SDS ES+K+ + +
Sbjct: 241 EKKDEDGKKDANKGDESKDAKKDAKEIKKGKKDKKKPSSTDSDSKDDVKKESKKDATKDA 300
Query: 151 LQAAEHPDEVEDPKNKKDAKSNYK 174
+ A+ E E +KKDAK N K
Sbjct: 301 KKVAKKDTEKESADSKKDAKKNAK 324
Score = 30.0 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 121 DDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKN--KKDAKSNYK 174
D D D ES D+ D++ ++ E+ A D ++ K KKDAK N K
Sbjct: 281 DSDSKDDVKKESKKDATKDAKKVAKKDTEKESADSKKDAKKNAKKDAKKDAKKNAK 336
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 41.2 bits (95), Expect = 5e-04
Identities = 44/192 (22%), Positives = 79/192 (41%), Gaps = 28/192 (14%)
Query: 10 HGVKRSASPDDDLGSSNWEAADLGNEERKQKFLRLMGAGKKEHT------GRLVIGDHKS 63
+G++ S D+ G++N + GN ++ + + AG E G V G + S
Sbjct: 134 NGIQGQVSIIDNAGATNRSNTN-GNTDKNTQNGDVGDAGHNEDVAVVQEDGPQVAGSNNS 192
Query: 64 TSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSE---VEDHDGEGDVAGDD 120
T + E+ NE S+ ++SK +G G E +++ DG G D
Sbjct: 193 TDNEDEIIENSCRNEGNTSEITPQINSKRNGTKEAEVTPGTGEDAGLDNSDGSPSGNGAD 252
Query: 121 DDDDD---DSPDPESPDDSESDSESEKEESAEELQAAEH---------------PDEVED 162
+D+D+ D D E+ + +S + S+ +E + + +H P+ ED
Sbjct: 253 EDEDEGSGDDEDEEAGNGKDSSNNSKGQEGQDHGKEDDHDSSIGQNSDSKEYYDPEGKED 312
Query: 163 PKNKKDAKSNYK 174
P N+ D K
Sbjct: 313 PHNEVDGDKTSK 324
Score = 36.2 bits (82), Expect = 0.016
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 105 SEVEDHDG-EGDVAGDDDDDDDDSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDP 163
S+ D D + + + D D D DS D D S+S + S+ +S++ +++ D +
Sbjct: 564 SDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSK 623
Query: 164 KNKKDAKSNYKMMFVKSSGS 183
+ ++S+ KS S
Sbjct: 624 SDSSKSESDSSDSDSKSDSS 643
Score = 33.9 bits (76), Expect = 0.080
Identities = 36/167 (21%), Positives = 56/167 (33%), Gaps = 20/167 (11%)
Query: 10 HGVKRSASPDDDLGSS----NWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTS 65
+G + DDD S+ N ++ GN G GK + + S S
Sbjct: 503 NGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDS--DSSDSSNS 560
Query: 66 HFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDD 125
+ D ++ S S DS S S+ + D D D
Sbjct: 561 SDSSDSSDSDSSDSNSSSDSDSSDSDSSDS---------SDSDSSDSSNSSDSSDSSDSS 611
Query: 126 DSPDPESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSN 172
DS D DS+SDS + +S++ ++ D N D+ N
Sbjct: 612 DSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSD-----SNSSDSSDN 653
Score = 33.5 bits (75), Expect = 0.10
Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 2/85 (2%)
Query: 101 GLGFSEVEDHDGEGDVAGDDDDD--DDDSPDPESPDDSESDSESEKEESAEELQAAEHPD 158
G G S+ D D D D D DS D S DS+S + S + + +
Sbjct: 543 GKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSS 602
Query: 159 EVEDPKNKKDAKSNYKMMFVKSSGS 183
+ D + D+ + KS S
Sbjct: 603 DSSDSSDSSDSSDSSDSSDSKSDSS 627
Score = 33.1 bits (74), Expect = 0.14
Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 21/158 (13%)
Query: 33 GNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGE--------------EDKKINE 78
GN + + + + + G G+K G V H +T + +D ++
Sbjct: 412 GNVKTQGEVVNIEGPGQKSEPGNKV--GHSNTGSDSNSDGYDSYDFDDKSMQGDDPNSSD 469
Query: 79 ELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDDDDSPDPESPDD--- 135
E + +S + R E +D+ D G +DDD D + D + D
Sbjct: 470 ESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSDSTSDTNNSDSNGN 529
Query: 136 -SESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSN 172
+ + +++K +S + + D D N D+ +
Sbjct: 530 GNNGNDDNDKSDSGKGKSDSSDSDS-SDSSNSSDSSDS 566
Score = 33.1 bits (74), Expect = 0.14
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 105 SEVEDHDGEGDVAGDDDDDDDDSPDPESPDDSESD----SESEKEESAEELQAAEHPD-- 158
S+ D D + D D DS D S+SD S+S+ +S+ +++ D
Sbjct: 552 SDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSS 611
Query: 159 EVEDPKNKKDAKSNYKMMFVKSSGS 183
+ D + D+KS+ SS S
Sbjct: 612 DSSDSSDSSDSKSDSSKSESDSSDS 636
Score = 30.8 bits (68), Expect = 0.68
Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 6/163 (3%)
Query: 15 SASPDDDLGSSNWEAADLGNEERKQKFLRLMGAGKKEHTGRLVIGDHKSTSHFRTGEEDK 74
S S D S + +++D + + + + + D +S +
Sbjct: 798 SNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSN 857
Query: 75 KINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDD-----DDSPD 129
+ + S S DS S S + + D D D D S
Sbjct: 858 RSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSSDSSDS 917
Query: 130 PESPDDSESDSESEKEESAEELQAAEHPDEVEDPKNKKDAKSN 172
S D SES + S+ S++ +++ D D N D+ ++
Sbjct: 918 SNSSDSSESSNSSDNSNSSDSSNSSDSSDS-SDSSNSSDSSNS 959
Score = 30.4 bits (67), Expect = 0.89
Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 105 SEVEDHDGEGDVAGDDDDDDDDSPDP-ESPDDSESDSESEKEESAEELQAAEHPDEVEDP 163
S+ D + + D D DS D +S + + SDS+S + + + + D
Sbjct: 690 SDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDS 749
Query: 164 KNKKDAKSN 172
N D+ +
Sbjct: 750 SNSSDSSDS 758
Score = 27.3 bits (59), Expect = 7.5
Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 3/113 (2%)
Query: 63 STSHFRTGEEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDD 122
S+ + + + N S S DS S S + E + D D
Sbjct: 650 SSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSD 709
Query: 123 DDD-DSPDPESPDDSESD--SESEKEESAEELQAAEHPDEVEDPKNKKDAKSN 172
D DS D + + S+SD + S+ +S+ +++ D + + S+
Sbjct: 710 SDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSS 762
>gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens]
Length = 872
Score = 41.2 bits (95), Expect = 5e-04
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
Query: 70 GEEDKKIN---EELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDD-- 124
G+ ++K N E+ E Q DS + ++ G G E + D E + +
Sbjct: 296 GDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRK 355
Query: 125 ---DDSPDPESPDDSESDSES-----EKEESAEELQAAEHPDEVEDPKNKKDA 169
DDS D S +SES+SES EKEE+ E L+ E P E E K K A
Sbjct: 356 HSGDDSFDEGSVSESESESESGQAEEEKEEAEEALKEKEKPKEEEWEKPKDAA 408
Score = 33.5 bits (75), Expect = 0.10
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 71 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDD---DDDDDS 127
E D +I E+ E + Q + S + G G + E + D +D ++D +
Sbjct: 262 ENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSN 321
Query: 128 PDPESPDDSESDSESEKEESAEE 150
D + + D E +KE+S +E
Sbjct: 322 DDKTKKSEGDGDKEEKKEDSEKE 344
>gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens]
Length = 876
Score = 41.2 bits (95), Expect = 5e-04
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
Query: 70 GEEDKKIN---EELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDDDDD-- 124
G+ ++K N E+ E Q DS + ++ G G E + D E + +
Sbjct: 296 GDGERKTNDKDEKKEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKKRNRK 355
Query: 125 ---DDSPDPESPDDSESDSES-----EKEESAEELQAAEHPDEVEDPKNKKDA 169
DDS D S +SES+SES EKEE+ E L+ E P E E K K A
Sbjct: 356 HSGDDSFDEGSVSESESESESGQAEEEKEEAEEALKEKEKPKEEEWEKPKDAA 408
Score = 33.5 bits (75), Expect = 0.10
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 71 EEDKKINEELESQYQQSMDSKLSGRYRRHCGLGFSEVEDHDGEGDVAGDDD---DDDDDS 127
E D +I E+ E + Q + S + G G + E + D +D ++D +
Sbjct: 262 ENDLRILEQEEEEEQAGKPGEPSKKEEGRAGAGLGDGERKTNDKDEKKEDGKQAENDSSN 321
Query: 128 PDPESPDDSESDSESEKEESAEE 150
D + + D E +KE+S +E
Sbjct: 322 DDKTKKSEGDGDKEEKKEDSEKE 344
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.302 0.124 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,082,442
Number of Sequences: 37866
Number of extensions: 417865
Number of successful extensions: 8731
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 286
Number of HSP's that attempted gapping in prelim test: 3278
Number of HSP's gapped (non-prelim): 3243
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.