Guide to the Human Genome
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Name: MTERFD2 Sequence: fasta or formatted (381aa) NCBI GI: 42740903
Description:

MTERF domain containing 2

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         15           2
 C cysteine            2.6         10           2
 D aspartate           9.2         35           4
 E glutamate          10.8         41           4
 F phenylalanine       2.6         10           1
 G glycine             4.2         16           2
 H histidine           1.6          6           1
 I isoleucine          4.2         16           2
 K lysine              6.0         23           2
 L leucine            13.1         50           2
 M methionine          2.1          8           1
 N asparagine          3.1         12           2
 P proline             3.7         14           1
 Q glutamine           6.3         24           2
 R arginine            6.8         26           2
 S serine              6.6         25           2
 T threonine           4.5         17           2
 V valine              5.5         21           2
 W tryptophan          0.5          2           1
 Y tyrosine            2.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MTERF domain containing 2 
ATAD2                 0.056   ATPase family, AAA domain containing 2 
MTERFD1               0.051   MTERF domain containing 1 
ANP32B                0.050   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
NCL                   0.049   nucleolin 
HUWE1                 0.046   HECT, UBA and WWE domain containing 1 
UBTF                  0.046   upstream binding transcription factor, RNA polymera...
UBTF                  0.046   upstream binding transcription factor, RNA polymera...
UBTF                  0.046   upstream binding transcription factor, RNA polymerase...
MYT1L                 0.046   myelin transcription factor 1-like 
LOC646817             0.043   PREDICTED: similar to SET translocation 
LOC646817             0.043   PREDICTED: similar to SET translocation 
LOC646817             0.043   PREDICTED: similar to SET translocation 
LOC647020             0.043   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.043   PREDICTED: similar to acidic (leucine-rich) nuclear...
SET                   0.043   SET translocation (myeloid leukemia-associated) iso...
SET                   0.043   SET translocation (myeloid leukemia-associated) iso...
MYT1                  0.042   myelin transcription factor 1 
BPTF                  0.042   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.042   bromodomain PHD finger transcription factor isoform ...
ANP32E                0.042   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
SETD1B                0.042   SET domain containing 1B 
ANP32A                0.041   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
ZBTB7C                0.041   zinc finger and BTB domain containing 7C 
ESF1                  0.041   ABT1-associated protein 
ANP32E                0.041   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32E                0.041   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
CASZ1                 0.039   castor homolog 1, zinc finger isoform a 
BAZ2B                 0.039   bromodomain adjacent to zinc finger domain, 2B [Homo...
TAF7L                 0.039   TATA box binding protein-associated factor, RNA poly...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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