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Search of human proteins with 7657146
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7657146 heat shock 22kDa protein 8 [Homo sapiens]
(196 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7657146 heat shock 22kDa protein 8 [Homo sapiens] 414 e-116
gi|4504517 heat shock protein beta-1 [Homo sapiens] 115 3e-26
gi|4503057 crystallin, alpha B [Homo sapiens] 81 5e-16
gi|21389433 heat shock protein, alpha-crystallin-related, B6 [Ho... 72 4e-13
gi|4503055 crystallin, alpha A [Homo sapiens] 67 1e-11
gi|4504519 heat shock 27kDa protein 2 [Homo sapiens] 63 2e-10
gi|7657202 cardiovascular heat shock protein [Homo sapiens] 57 1e-08
gi|5453688 heat shock 27kDa protein 3 [Homo sapiens] 55 4e-08
gi|15082238 heat shock protein, alpha-crystallin-related, B9 [Ho... 37 0.014
gi|194248060 outer dense fiber of sperm tails 1 [Homo sapiens] 36 0.018
gi|23510333 pygopus homolog 2 [Homo sapiens] 33 0.12
gi|111185957 downstream of tyrosine kinase 7 [Homo sapiens] 33 0.16
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 32 0.26
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 32 0.26
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 32 0.26
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 32 0.45
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 31 0.77
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 31 0.77
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 30 1.0
gi|5032105 small optic lobes [Homo sapiens] 30 1.0
gi|191252801 WDFY family member 4 [Homo sapiens] 30 1.3
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c... 30 1.7
gi|27886563 nuclear factor of activated T-cells, cytoplasmic, ca... 30 1.7
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 29 2.2
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 29 2.2
gi|4505723 peroxisomal biogenesis factor 13 [Homo sapiens] 29 2.2
gi|156938237 ADP-ribosylation factor-like 17 isoform a [Homo sap... 29 2.2
gi|166063999 hypothetical protein LOC51326 isoform a [Homo sapiens] 29 2.2
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 29 2.9
gi|42794779 myosin 18A isoform b [Homo sapiens] 29 2.9
>gi|7657146 heat shock 22kDa protein 8 [Homo sapiens]
Length = 196
Score = 414 bits (1063), Expect = e-116
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MADGQMPFSCHYPSRLRRDPFRDSPLSSRLLDDGFGMDPFPDDLTASWPDWALPRLSSAW 60
MADGQMPFSCHYPSRLRRDPFRDSPLSSRLLDDGFGMDPFPDDLTASWPDWALPRLSSAW
Sbjct: 1 MADGQMPFSCHYPSRLRRDPFRDSPLSSRLLDDGFGMDPFPDDLTASWPDWALPRLSSAW 60
Query: 61 PGTLRSGMVPRGPTATARFGVPAEGRTPPPFPGEPWKVCVNVHSFKPEELMVKTKDGYVE 120
PGTLRSGMVPRGPTATARFGVPAEGRTPPPFPGEPWKVCVNVHSFKPEELMVKTKDGYVE
Sbjct: 61 PGTLRSGMVPRGPTATARFGVPAEGRTPPPFPGEPWKVCVNVHSFKPEELMVKTKDGYVE 120
Query: 121 VSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLSPEGLLIIEAPQVPPYSTFGES 180
VSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLSPEGLLIIEAPQVPPYSTFGES
Sbjct: 121 VSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLSPEGLLIIEAPQVPPYSTFGES 180
Query: 181 SFNNELPQDSQEVTCT 196
SFNNELPQDSQEVTCT
Sbjct: 181 SFNNELPQDSQEVTCT 196
>gi|4504517 heat shock protein beta-1 [Homo sapiens]
Length = 205
Score = 115 bits (287), Expect = 3e-26
Identities = 72/180 (40%), Positives = 97/180 (53%), Gaps = 23/180 (12%)
Query: 1 MADGQMPFSC-HYPSRLRRDPFRDSPLSSRLLDDGFGMDPFPDDLTASWPDWALPRLSSA 59
M + ++PFS PS DPFRD SRL D FG+ P++ W W S+
Sbjct: 1 MTERRVPFSLLRGPSW---DPFRDWYPHSRLFDQAFGLPRLPEE----WSQWLG---GSS 50
Query: 60 WPGTLRSGMVPRGPTATARFGVPAEGR----------TPPPFPGEPWKVCVNVHSFKPEE 109
WPG +R +P + PA R + + W+V ++V+ F P+E
Sbjct: 51 WPGYVRP--LPPAAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSLDVNHFAPDE 108
Query: 110 LMVKTKDGYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLSPEGLLIIEAP 169
L VKTKDG VE++GKHEE+Q E G +S+ FT+K LP VDP V +SLSPEG L +EAP
Sbjct: 109 LTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAP 168
>gi|4503057 crystallin, alpha B [Homo sapiens]
Length = 175
Score = 81.3 bits (199), Expect = 5e-16
Identities = 57/165 (34%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 6 MPFSCHYPSRLRRDPFRDSPLSSRLLDDGFGMDPFPDDLTASWPDWALPRLSSAWPGTLR 65
M + H+P +RR PF SRL D FG DL P +S P LR
Sbjct: 1 MDIAIHHPW-IRR-PFFPFHSPSRLFDQFFGEHLLESDL--------FPTSTSLSPFYLR 50
Query: 66 SGMVPRGPTATARFGVPAEGRTPPPFPGEPWKVCVNVHSFKPEELMVKTKDGYVEVSGKH 125
R P+ G + + + V ++V F PEEL VK +EV GKH
Sbjct: 51 PPSFLRAPSWFDT------GLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKH 104
Query: 126 EEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLSPEGLLIIEAPQ 170
EE+Q E G +S+ F +K ++PA+VDP+T+ +SLS +G+L + P+
Sbjct: 105 EERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPR 149
>gi|21389433 heat shock protein, alpha-crystallin-related, B6 [Homo
sapiens]
Length = 160
Score = 71.6 bits (174), Expect = 4e-13
Identities = 55/167 (32%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 13 PSRLRRD--PFRDSPLSSRLLDDGFGMDPFPDDLTASWPDWALPRLSSAWPGTLRSGMVP 70
PS LRR P RL D FG +L A P P A L VP
Sbjct: 9 PSWLRRASAPLPGLSAPGRLFDQRFGEGLLEAELAALCPTTLAPYYLRAPSVALPVAQVP 68
Query: 71 RGPTATARFGVPAEGRTPPPFPGEPWKVCVNVHSFKPEELMVKTKDGYVEVSGKHEEKQQ 130
P + V ++V F PEE+ VK +VEV +HEE+
Sbjct: 69 TDPGH--------------------FSVLLDVKHFSPEEIAVKVVGEHVEVHARHEERPD 108
Query: 131 EGGIVSKNFTKKIQLPAEVDPVTVFASLSPEGLLIIEA----PQVPP 173
E G V++ F ++ +LP VDP V ++LSPEG+L I+A Q PP
Sbjct: 109 EHGFVAREFHRRYRLPPGVDPAAVTSALSPEGVLSIQAAPASAQAPP 155
>gi|4503055 crystallin, alpha A [Homo sapiens]
Length = 173
Score = 66.6 bits (161), Expect = 1e-11
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 28 SRLLDDGFGMDPFPDDLTASWPDWALPRLSSAWPGTLRSGMVPRGPTATARFGVPAEGRT 87
SRL D FG F DL LP LSS R + V G +
Sbjct: 20 SRLFDQFFGEGLFEYDL--------LPFLSSTISPYYRQSLFRT---------VLDSGIS 62
Query: 88 PPPFPGEPWKVCVNVHSFKPEELMVKTKDGYVEVSGKHEEKQQEGGIVSKNFTKKIQLPA 147
+ + + ++V F PE+L VK +D +VE+ GKH E+Q + G +S+ F ++ +LP+
Sbjct: 63 EVRSDRDKFVIFLDVKHFSPEDLTVKVQDDFVEIHGKHNERQDDHGYISREFHRRYRLPS 122
Query: 148 EVDPVTVFASLSPEGLLIIEAPQV 171
VD + SLS +G+L P++
Sbjct: 123 NVDQSALSCSLSADGMLTFCGPKI 146
>gi|4504519 heat shock 27kDa protein 2 [Homo sapiens]
Length = 182
Score = 62.8 bits (151), Expect = 2e-10
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 100 VNVHSFKPEELMVKTKDGYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLS 159
++V F P+E+ V+T D +EVS +H ++ G VS+ F + LPA+VDP V A+LS
Sbjct: 78 LDVSHFTPDEVTVRTVDNLLEVSARHPQRLDRHGFVSREFCRTYVLPADVDPWRVRAALS 137
Query: 160 PEGLLIIEAPQ 170
+G+L +EAP+
Sbjct: 138 HDGILNLEAPR 148
>gi|7657202 cardiovascular heat shock protein [Homo sapiens]
Length = 170
Score = 56.6 bits (135), Expect = 1e-08
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 93 GEPWKVCVNVHSFKPEELMVKTKDGYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPV 152
G+ ++ V+V F PE+++V T + ++EV EK G V F K QLP +VDP
Sbjct: 79 GDAYEFAVDVRDFSPEDIIVTTSNNHIEVRA---EKLAADGTVMNTFAHKCQLPEDVDPT 135
Query: 153 TVFASLSPEGLLIIEAPQVPPYSTFGESSFNNEL 186
+V ++L +G L I A + P++ + +F E+
Sbjct: 136 SVTSALREDGSLTIRARR-HPHTEHVQQTFRTEI 168
>gi|5453688 heat shock 27kDa protein 3 [Homo sapiens]
Length = 150
Score = 55.1 bits (131), Expect = 4e-08
Identities = 24/87 (27%), Positives = 53/87 (60%)
Query: 81 VPAEGRTPPPFPGEPWKVCVNVHSFKPEELMVKTKDGYVEVSGKHEEKQQEGGIVSKNFT 140
V + TPP +++ ++V F PE+++++T +G++ + +H + E G +S++FT
Sbjct: 56 VDSAAETPPREGKSHFQILLDVVQFLPEDIIIQTFEGWLLIKAQHGTRMDEHGFISRSFT 115
Query: 141 KKIQLPAEVDPVTVFASLSPEGLLIIE 167
++ +LP V+ + A L +G+L++E
Sbjct: 116 RQYKLPDGVEIKDLSAVLCHDGILVVE 142
>gi|15082238 heat shock protein, alpha-crystallin-related, B9 [Homo
sapiens]
Length = 159
Score = 36.6 bits (83), Expect = 0.014
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 100 VNVHSFKPEELMVKTKDGYVEVSGKHEEKQQEGGIVSKNFTKKI---QLPAEVDPVTVFA 156
++ H F PEEL+V+ ++ V+G+ + ++ VS ++K+ LP+ + P +
Sbjct: 58 LDAHGFAPEELVVQVDGQWLMVTGQQQLDVRDPERVSYRMSQKVHRKMLPSNLSPTAMTC 117
Query: 157 SLSPEGLL 164
L+P G L
Sbjct: 118 CLTPSGQL 125
>gi|194248060 outer dense fiber of sperm tails 1 [Homo sapiens]
Length = 250
Score = 36.2 bits (82), Expect = 0.018
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 100 VNVHSFKPEELMVKTKDGYVEVSGKHEEKQQEGGIVS---KNFTKKIQLPAEVDPVTVFA 156
VNV F+P+++ V+ KDG V VS + E + G N K+ LP VD V
Sbjct: 129 VNVCGFEPDQVKVRVKDGKVCVSAERENRYDCLGSKKYSYMNICKEFSLPPCVDEKDVTY 188
Query: 157 SLSPEGLLIIEAPQVP 172
S + IE+P P
Sbjct: 189 SYGLGSCVKIESPCYP 204
>gi|23510333 pygopus homolog 2 [Homo sapiens]
Length = 406
Score = 33.5 bits (75), Expect = 0.12
Identities = 31/107 (28%), Positives = 38/107 (35%), Gaps = 17/107 (15%)
Query: 13 PSRLRRDPFRDSPLSSRLLDDGFGMDPFPDDLTASWP---DWALPRLSSAWPGTLRS--- 66
P + RR P S L + P D L AS P D+ P++ A P L S
Sbjct: 41 PEKKRRKSNTQGPAYSHLTEFAPPPTPMVDHLVASNPFEDDFGAPKVGVAAPPFLGSPVP 100
Query: 67 -----------GMVPRGPTATARFGVPAEGRTPPPFPGEPWKVCVNV 102
G VP G + G R PPPFP P N+
Sbjct: 101 FGGFRVQGGMAGQVPPGYSTGGGGGPQPLRRQPPPFPPNPMGPAFNM 147
>gi|111185957 downstream of tyrosine kinase 7 [Homo sapiens]
Length = 504
Score = 33.1 bits (74), Expect = 0.16
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 7/40 (17%)
Query: 58 SAWPGTLRSGMVPRGPTATARFGVPAEGRTPPPFPGEPWK 97
S W GT R G+V P + E P P PGEPW+
Sbjct: 444 SGWLGTRRRGLVMEAPQGS-------EATLPGPAPGEPWE 476
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 32.3 bits (72), Expect = 0.26
Identities = 15/35 (42%), Positives = 15/35 (42%)
Query: 61 PGTLRSGMVPRGPTATARFGVPAEGRTPPPFPGEP 95
PG G GPT G P RTPPP P P
Sbjct: 182 PGVRGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRP 216
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 32.3 bits (72), Expect = 0.26
Identities = 15/35 (42%), Positives = 15/35 (42%)
Query: 61 PGTLRSGMVPRGPTATARFGVPAEGRTPPPFPGEP 95
PG G GPT G P RTPPP P P
Sbjct: 182 PGVRGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRP 216
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 32.3 bits (72), Expect = 0.26
Identities = 15/35 (42%), Positives = 15/35 (42%)
Query: 61 PGTLRSGMVPRGPTATARFGVPAEGRTPPPFPGEP 95
PG G GPT G P RTPPP P P
Sbjct: 182 PGVRGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRP 216
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 31.6 bits (70), Expect = 0.45
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 11/60 (18%)
Query: 36 GMDPFPDDLTASWPDWALPRLSSAWPGTLRSGMVPRGPTATARFGVPAEGRTPPPFPGEP 95
GM P P ++ PR+ P T +GM P P PA+G PPP PG P
Sbjct: 1052 GMPPMPGNILG-------PRV----PLTAPNGMYPPPPQQQPPPPPPADGVPPPPAPGPP 1100
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 30.8 bits (68), Expect = 0.77
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 8/53 (15%)
Query: 41 PDDLTASWPDWALPRLSSAWPGTLRSGMVPRGPTATARFGVPAEGRTPPPFPG 93
PD + P P SS P S VP GP P+ G TPPPFPG
Sbjct: 180 PDSIPPPVPSTPRPIQSS--PHNRGSPPVPGGPRQ------PSPGPTPPPFPG 224
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 30.8 bits (68), Expect = 0.77
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 8/53 (15%)
Query: 41 PDDLTASWPDWALPRLSSAWPGTLRSGMVPRGPTATARFGVPAEGRTPPPFPG 93
PD + P P SS P S VP GP P+ G TPPPFPG
Sbjct: 180 PDSIPPPVPSTPRPIQSS--PHNRGSPPVPGGPRQ------PSPGPTPPPFPG 224
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 30.4 bits (67), Expect = 1.0
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 63 TLRSGMVPRGPTATARFGVPAEGRTPPPFPGEPW 96
TLRSG P P+ FG P R PPP P P+
Sbjct: 1852 TLRSGP-PSPPSTATSFGGPRPRRQPPPPPRSPF 1884
>gi|5032105 small optic lobes [Homo sapiens]
Length = 1086
Score = 30.4 bits (67), Expect = 1.0
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 167 EAPQVPPYSTFGESSFNNELPQDSQEV 193
E P+VPP+S F + NN +P+ +EV
Sbjct: 225 EPPRVPPFSPFSSTLQNNPVPRSRREV 251
>gi|191252801 WDFY family member 4 [Homo sapiens]
Length = 3184
Score = 30.0 bits (66), Expect = 1.3
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Query: 73 PTATARFGVPAEGR---TPPPFPGEPWKVCVNVHSFKPEELMVKTKDGYVEVSGKHEEKQ 129
P TA G P G+ TP PG P ++ S +P ++ V KD Y+ G K
Sbjct: 2819 PARTAA-GKPLPGKDVSTPVSLPGHPQPFFYSLQSLRPSQVTV--KDMYLFSLGSESPKG 2875
Query: 130 QEGGIVSKNFTKKIQLPAEVDPV 152
G IVS T+K L E + V
Sbjct: 2876 AIGHIVS---TEKTILAVERNKV 2895
>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 1 [Homo sapiens]
Length = 964
Score = 29.6 bits (65), Expect = 1.7
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 12 YPSRLRRDPFRDSPLSSRLLDDGFGMDPFPDDLTASWPDWALPRLSSAWPGTLRSGMVPR 71
YPS DP ++P S G+GM P +P P S PG LR R
Sbjct: 785 YPSYPHEDPACETPYLSEGF--GYGMPPL-------YPQTGPP--PSYRPG-LRMFPETR 832
Query: 72 GPTATARFGVPAEGRTPPPFPGEPW 96
G T A+ PA P PFP +P+
Sbjct: 833 GTTGCAQ--PPAVSFLPRPFPSDPY 855
>gi|27886563 nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 4 isoform 2 [Homo sapiens]
Length = 902
Score = 29.6 bits (65), Expect = 1.7
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 12 YPSRLRRDPFRDSPLSSRLLDDGFGMDPFPDDLTASWPDWALPRLSSAWPGTLRSGMVPR 71
YPS DP ++P S G+GM P +P P S PG LR R
Sbjct: 722 YPSYPHEDPACETPYLSEGF--GYGMPPL-------YPQTGPP--PSYRPG-LRMFPETR 769
Query: 72 GPTATARFGVPAEGRTPPPFPGEPW 96
G T A+ PA P PFP +P+
Sbjct: 770 GTTGCAQ--PPAVSFLPRPFPSDPY 792
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 29.3 bits (64), Expect = 2.2
Identities = 22/67 (32%), Positives = 25/67 (37%), Gaps = 3/67 (4%)
Query: 31 LDDGFGMDPFP-DDLTASWPDWALPRLSSAWP--GTLRSGMVPRGPTATARFGVPAEGRT 87
L FG P P D P W + LS G L+ G GP T G PA
Sbjct: 126 LPPAFGAPPPPLFDAAFPTPQWGIVDLSGHQHLFGNLKRGGPASGPGVTPGLGAPAGAPG 185
Query: 88 PPPFPGE 94
P P P +
Sbjct: 186 PLPAPSQ 192
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 29.3 bits (64), Expect = 2.2
Identities = 22/67 (32%), Positives = 25/67 (37%), Gaps = 3/67 (4%)
Query: 31 LDDGFGMDPFP-DDLTASWPDWALPRLSSAWP--GTLRSGMVPRGPTATARFGVPAEGRT 87
L FG P P D P W + LS G L+ G GP T G PA
Sbjct: 126 LPPAFGAPPPPLFDAAFPTPQWGIVDLSGHQHLFGNLKRGGPASGPGVTPGLGAPAGAPG 185
Query: 88 PPPFPGE 94
P P P +
Sbjct: 186 PLPAPSQ 192
>gi|4505723 peroxisomal biogenesis factor 13 [Homo sapiens]
Length = 403
Score = 29.3 bits (64), Expect = 2.2
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 51 WALPRLSSAWPG-----TLRSGMVPRGPTATARFGVPAEGRTPPPFPGEPWKV--CVNVH 103
W R+ A PG T +S + GPT R G PA R PPP P + +V+
Sbjct: 12 WETRRIPGAGPGPGPGPTFQSADL--GPTLMTRPGQPALTRVPPPILPRPSQQTGSSSVN 69
Query: 104 SFKP 107
+F+P
Sbjct: 70 TFRP 73
>gi|156938237 ADP-ribosylation factor-like 17 isoform a [Homo
sapiens]
Length = 177
Score = 29.3 bits (64), Expect = 2.2
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
Query: 1 MADGQMPFSCHYPS-----RLRRDPFRDSPLSSRLLDDGFGMDPFPDDLTASWPDWALPR 55
+A G +P C + R PF P SSR G +D + +W W
Sbjct: 99 LASGVLPIKCSHVEFGMWKGGRSHPFL--PHSSRCAGSGGQLDSILPHQSPAWGPWGCKD 156
Query: 56 LSSAWPGTLRSGMV 69
LSS +P L S ++
Sbjct: 157 LSSGFPSFLTSSIL 170
>gi|166063999 hypothetical protein LOC51326 isoform a [Homo sapiens]
Length = 177
Score = 29.3 bits (64), Expect = 2.2
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
Query: 1 MADGQMPFSCHYPS-----RLRRDPFRDSPLSSRLLDDGFGMDPFPDDLTASWPDWALPR 55
+A G +P C + R PF P SSR G +D + +W W
Sbjct: 99 LASGVLPIKCSHVEFGMWKGGRSHPFL--PHSSRCAGSGGQLDSILPHQSPAWGPWGCKD 156
Query: 56 LSSAWPGTLRSGMV 69
LSS +P L S ++
Sbjct: 157 LSSGFPSFLTSSIL 170
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 28.9 bits (63), Expect = 2.9
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 117 GYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPVTVFASLSP 160
G VE S ++ +GG + + T+++ V PVTVF SLSP
Sbjct: 27 GPVEPSWENAGHTMDGGAPTSSPTRRVSF---VPPVTVFPSLSP 67
>gi|42794779 myosin 18A isoform b [Homo sapiens]
Length = 2039
Score = 28.9 bits (63), Expect = 2.9
Identities = 37/141 (26%), Positives = 54/141 (38%), Gaps = 11/141 (7%)
Query: 41 PDDLTASWP-DWALPRLSSAWPGTLRSGMVPRGPTATARFGVPAEGRTPPPFPGEPWKVC 99
P+ +T +P D LP + P TLR + R PT F + RT G + C
Sbjct: 194 PELVTKKFPVDLRLPPVVPLPPPTLRELELQRRPTGDFGFSLR---RTTMLDRGPEGQAC 250
Query: 100 VNVHSF-------KPEELMVKTKDGYVEVSGKHEEKQQEGGIVSKNFTKKIQLPAEVDPV 152
V F K L + D VE++G + E + IV + +V P+
Sbjct: 251 RRVVHFAEPGAGTKDLALGLVPGDRLVEINGHNVESKSRDEIVEMIRQSGDSVRLKVQPI 310
Query: 153 TVFASLSPEGLLIIEAPQVPP 173
+ LS L E P+ P
Sbjct: 311 PELSELSRSWLRSGEGPRREP 331
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,799,173
Number of Sequences: 37866
Number of extensions: 539374
Number of successful extensions: 1318
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 1281
Number of HSP's gapped (non-prelim): 72
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.