Guide to the Human Genome
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Name: CRYAB Sequence: fasta or formatted (175aa) NCBI GI: 4503057
Description:

crystallin, alpha B

Referenced in:

Crystallins and Other Eye Proteins
Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4          6           2
 C cysteine            0.0          0           0
 D aspartate           6.3         11           1
 E glutamate           8.0         14           2
 F phenylalanine       8.0         14           2
 G glycine             4.6          8           1
 H histidine           5.1          9           2
 I isoleucine          5.1          9           1
 K lysine              5.7         10           2
 L leucine             8.6         15           2
 M methionine          1.1          2           1
 N asparagine          1.1          2           1
 P proline             9.7         17           2
 Q glutamine           1.7          3           1
 R arginine            8.0         14           2
 S serine              9.7         17           2
 T threonine           5.1          9           1
 V valine              6.3         11           1
 W tryptophan          1.1          2           1
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   crystallin, alpha B 
CRYAA                 0.484   crystallin, alpha A 
HSPB6                 0.350   heat shock protein, alpha-crystallin-related, B6 [Ho...
HSPB1                 0.294   heat shock protein beta-1 
HSPB2                 0.261   heat shock 27kDa protein 2 
HSPB8                 0.166   heat shock 22kDa protein 8 
HSPB3                 0.107   heat shock 27kDa protein 3 
HSPB7                 0.086   cardiovascular heat shock protein 
HSPB9                 0.050   heat shock protein, alpha-crystallin-related, B9 [Ho...
ACP2                  0.012   acid phosphatase 2, lysosomal isoform 2 
ACP2                  0.012   acid phosphatase 2, lysosomal isoform 1 precursor [Ho...
MLL                   0.009   myeloid/lymphoid or mixed-lineage leukemia protein [...
GTF2E2                0.009   general transcription factor IIE, polypeptide 2, beta...
ACY3                  0.009   aspartoacylase 3 
TEX14                 0.009   testis expressed sequence 14 isoform a 
TEX14                 0.009   testis expressed sequence 14 isoform b 
EDC3                  0.006   enhancer of mRNA decapping 3 
EDC3                  0.006   enhancer of mRNA decapping 3 
EDC3                  0.006   enhancer of mRNA decapping 3 
OSBPL5                0.006   oxysterol-binding protein-like protein 5 isoform a [...
OSBPL5                0.006   oxysterol-binding protein-like protein 5 isoform b ...
OSBPL5                0.006   oxysterol-binding protein-like protein 5 isoform b [...
ODF1                  0.006   outer dense fiber of sperm tails 1 
DPCR1                 0.006   diffuse panbronchiolitis critical region 1 protein ...
C5                    0.006   complement component 5 preproprotein 
C11orf17              0.006   chromosome 11 open reading frame 17 
C11orf17              0.006   chromosome 11 open reading frame 17 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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