Guide to the Human Genome
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Name: ARL17 Sequence: fasta or formatted (177aa) NCBI GI: 156938237
Description:

ADP-ribosylation factor-like 17 isoform a

Referenced in:

ADP-Ribosylation Factors

Other entries for this name:
alt prot [125aa] ADP-ribosylation factor-like 17 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5          8           1
 C cysteine            2.3          4           1
 D aspartate           2.3          4           1
 E glutamate           2.8          5           1
 F phenylalanine       6.2         11           2
 G glycine            10.7         19           2
 H histidine           4.0          7           1
 I isoleucine          4.5          8           1
 K lysine              9.0         16           3
 L leucine            10.2         18           2
 M methionine          1.7          3           1
 N asparagine          2.3          4           2
 P proline             6.2         11           1
 Q glutamine           2.8          5           1
 R arginine            2.8          5           1
 S serine             11.3         20           2
 T threonine           5.6         10           2
 V valine              6.2         11           2
 W tryptophan          3.4          6           1
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor-like 17 isoform a 
ARL17P1               1.000   hypothetical protein LOC51326 isoform a 
ARL17                 0.443   ADP-ribosylation factor-like 17 isoform b 
ARL17P1               0.443   hypothetical protein LOC51326 isoform b 
LOC100294341          0.437   PREDICTED: similar to ADP-ribosylation factor-like ...
ARF1                  0.316   ADP-ribosylation factor 1 
ARF1                  0.316   ADP-ribosylation factor 1 
ARF1                  0.316   ADP-ribosylation factor 1 
ARF1                  0.316   ADP-ribosylation factor 1 
ARF3                  0.316   ADP-ribosylation factor 3 
ARF4                  0.284   ADP-ribosylation factor 4 
ARF5                  0.282   ADP-ribosylation factor 5 
ARF6                  0.250   ADP-ribosylation factor 6 
ARL1                  0.236   ADP-ribosylation factor-like 1 
TRIM23                0.198   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.198   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.198   ADP-ribosylation factor domain protein 1 isoform alph...
ARL14                 0.147   ADP-ribosylation factor-like 14 
ARL5B                 0.141   ADP-ribosylation factor-like 8 
ARL4C                 0.135   ADP-ribosylation factor-like 4C 
ARL5A                 0.129   ADP-ribosylation factor-like 5A isoform 1 
ARL4D                 0.126   ADP-ribosylation factor-like 4D 
ARL4A                 0.126   ADP-ribosylation factor-like 4A 
ARL4A                 0.126   ADP-ribosylation factor-like 4A 
ARL4A                 0.126   ADP-ribosylation factor-like 4A 
ARL3                  0.121   ADP-ribosylation factor-like 3 
ARL2                  0.121   ADP-ribosylation factor-like 2 
ARL11                 0.103   ADP-ribosylation factor-like 11 
ARL5C                 0.098   ADP-ribosylation factor-like 5C 
ARL6                  0.095   ADP-ribosylation factor-like 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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