Guide to the Human Genome
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Name: HSPB2 Sequence: fasta or formatted (182aa) NCBI GI: 4504519
Description:

heat shock 27kDa protein 2

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         18           2
 C cysteine            0.5          1           1
 D aspartate           4.9          9           1
 E glutamate          11.5         21           5
 F phenylalanine       3.8          7           1
 G glycine             7.1         13           2
 H histidine           4.4          8           1
 I isoleucine          2.2          4           1
 K lysine              0.5          1           1
 L leucine             9.9         18           2
 M methionine          0.5          1           1
 N asparagine          2.2          4           1
 P proline             9.3         17           2
 Q glutamine           1.6          3           1
 R arginine            9.3         17           1
 S serine              6.0         11           1
 T threonine           4.4          8           1
 V valine              7.7         14           1
 W tryptophan          0.5          1           1
 Y tyrosine            3.3          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heat shock 27kDa protein 2 
CRYAB                 0.253   crystallin, alpha B 
HSPB6                 0.227   heat shock protein, alpha-crystallin-related, B6 [Ho...
HSPB1                 0.216   heat shock protein beta-1 
CRYAA                 0.198   crystallin, alpha A 
HSPB3                 0.135   heat shock 27kDa protein 3 
HSPB8                 0.109   heat shock 22kDa protein 8 
HSPB7                 0.095   cardiovascular heat shock protein 
ODF1                  0.023   outer dense fiber of sperm tails 1 
KCNH2                 0.020   voltage-gated potassium channel, subfamily H, member...
TMEM5                 0.020   transmembrane protein 5 
LOC100133479          0.011   PREDICTED: hypothetical protein 
LOC100133479          0.011   PREDICTED: hypothetical protein 
NPAS1                 0.011   neuronal PAS domain protein 1 
ANKRD57               0.009   ankyrin repeat domain 57 
EYS                   0.009   eyes shut homolog isoform 1 
KIAA0774              0.009   hypothetical protein LOC23281 isoform a 
KDM6A                 0.006   ubiquitously transcribed tetratricopeptide repeat, ...
ABI2                  0.006   abl interactor 2 
STX5                  0.006   syntaxin 5 
LOC728047             0.006   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.006   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.006   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653073             0.006   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653073             0.006   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653720             0.006   PREDICTED: similar to Golgin subfamily A member 8-l...
AKAP8L                0.006   A kinase (PRKA) anchor protein 8-like 
REXO1                 0.006   transcription elongation factor B polypeptide 3 bin...
COMMD8                0.006   COMM domain containing 8 
IGSF9B                0.006   immunoglobulin superfamily, member 9B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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