Guide to the Human Genome
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Name: WDFY4 Sequence: fasta or formatted (3184aa) NCBI GI: 191252801
Description:

WDFY family member 4

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0        222           4
 C cysteine            2.5         79           3
 D aspartate           4.6        145           2
 E glutamate           6.2        199           3
 F phenylalanine       4.5        143           2
 G glycine             6.2        198           2
 H histidine           2.9         92           2
 I isoleucine          4.1        132           3
 K lysine              4.3        136           2
 L leucine            13.6        433           4
 M methionine          2.1         68           1
 N asparagine          2.5         79           2
 P proline             5.4        173           3
 Q glutamine           5.3        169           2
 R arginine            4.7        149           3
 S serine              9.2        294           3
 T threonine           5.2        166           2
 V valine              6.1        193           3
 W tryptophan          1.6         51           2
 Y tyrosine            2.0         63           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WDFY family member 4 
WDFY3                 0.278   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
LYST                  0.056   lysosomal trafficking regulator 
LRBA                  0.050   LPS-responsive vesicle trafficking, beach and ancho...
NBEAL2                0.049   neurobeachin-like 2 
NBEAL1                0.047   neurobeachin-like 1 isoform 3 
NBEAL1                0.047   neurobeachin-like 1 isoform 1 
NBEA                  0.047   neurobeachin 
NBEAL1                0.046   neurobeachin-like 1 isoform 2 
WDFY3                 0.043   WD repeat and FYVE domain containing 3 isoform 2 [Ho...
NSMAF                 0.039   neutral sphingomyelinase (N-SMase) activation associ...
NSMAF                 0.039   neutral sphingomyelinase (N-SMase) activation assoc...
WDR81                 0.010   PREDICTED: WD repeat domain 81 
WDR81                 0.010   PREDICTED: WD repeat domain 81 
WDR81                 0.010   PREDICTED: WD repeat domain 81 
WDFY3                 0.005   WD repeat and FYVE domain containing 3 isoform 3 [Ho...
PLRG1                 0.005   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
GNB4                  0.004   guanine nucleotide-binding protein, beta-4 subunit [...
GNB1                  0.004   guanine nucleotide-binding protein, beta-1 subunit [...
STRN4                 0.004   zinedin isoform 2 
STRN4                 0.004   zinedin isoform 1 
WDR5B                 0.004   WD repeat domain 5B 
GNB2L1                0.004   guanine nucleotide binding protein (G protein), beta ...
NLE1                  0.004   Notchless gene homolog isoform a 
WDR48                 0.004   WD repeat domain 48 
PAFAH1B1              0.004   platelet-activating factor acetylhydrolase, isoform I...
WDR38                 0.004   WD repeat domain 38 
FBXW10                0.004   F-box and WD-40 domain protein 10 
CDRT1                 0.004   CMT1A duplicated region transcript 1 
COPB2                 0.004   coatomer protein complex, subunit beta 2 (beta prime)...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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