Guide to the Human Genome
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Name: HSPB9 Sequence: fasta or formatted (159aa) NCBI GI: 15082238
Description:

heat shock protein, alpha-crystallin-related, B9

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         13           2
 C cysteine            2.5          4           2
 D aspartate           5.0          8           1
 E glutamate           4.4          7           2
 F phenylalanine       1.9          3           1
 G glycine             6.9         11           1
 H histidine           1.9          3           1
 I isoleucine          0.0          0           0
 K lysine              2.5          4           1
 L leucine            10.1         16           2
 M methionine          4.4          7           1
 N asparagine          3.8          6           1
 P proline             6.9         11           1
 Q glutamine           7.5         12           3
 R arginine            9.4         15           1
 S serine              8.8         14           1
 T threonine           5.0          8           1
 V valine              8.8         14           2
 W tryptophan          1.3          2           1
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   heat shock protein, alpha-crystallin-related, B9 [Ho... 
CRYAA                 0.067   crystallin, alpha A 
HSPB6                 0.060   heat shock protein, alpha-crystallin-related, B6 [Ho...
CRYAB                 0.057   crystallin, alpha B 
HSPB1                 0.050   heat shock protein beta-1 
HSPB8                 0.040   heat shock 22kDa protein 8 
HSPB7                 0.040   cardiovascular heat shock protein 
HSPB3                 0.020   heat shock 27kDa protein 3 
NCOA6                 0.010   nuclear receptor coactivator 6 
LOC100132369          0.010   PREDICTED: hypothetical protein 
LOC100132369          0.010   PREDICTED: hypothetical protein 
LOC100132369          0.010   PREDICTED: hypothetical protein 
LOC100134381          0.007   PREDICTED: hypothetical protein 
LOC100289879          0.007   PREDICTED: hypothetical protein XP_002348206 
LOC100286935          0.007   PREDICTED: hypothetical protein XP_002343865 
IL27RA                0.007   class I cytokine receptor 
CUEDC2                0.007   CUE domain containing 2 
L3MBTL                0.007   l(3)mbt-like isoform I 
L3MBTL                0.007   l(3)mbt-like isoform II 
QRICH1                0.007   glutamine-rich 1 
QRICH1                0.007   glutamine-rich 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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