Guide to the Human Genome
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Name: CRCP Sequence: fasta or formatted (148aa) NCBI GI: 7656977
Description:

calcitonin gene-related peptide-receptor component protein isoform a

Referenced in:

Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [115aa] calcitonin gene-related peptide-receptor component protein isoform b
alt prot [71aa] calcitonin gene-related peptide-receptor component protein isoform c
alt prot [141aa] calcitonin gene-related peptide-receptor component protein isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         10           1
 C cysteine            0.7          1           1
 D aspartate           2.7          4           1
 E glutamate          14.2         21           2
 F phenylalanine       1.4          2           1
 G glycine             1.4          2           1
 H histidine           3.4          5           1
 I isoleucine          4.1          6           1
 K lysine              8.8         13           2
 L leucine            12.2         18           2
 M methionine          2.0          3           1
 N asparagine          6.1          9           1
 P proline             4.1          6           1
 Q glutamine           6.1          9           2
 R arginine            3.4          5           1
 S serine              7.4         11           2
 T threonine           8.1         12           1
 V valine              5.4          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcitonin gene-related peptide-receptor component pr... 
CRCP                  0.691   calcitonin gene-related peptide-receptor component ...
CRCP                  0.683   calcitonin gene-related peptide-receptor component ...
CRCP                  0.408   calcitonin gene-related peptide-receptor component ...
C11orf88              0.030   hypothetical protein LOC399949 isoform 1 
RAD50                 0.030   RAD50 homolog isoform 2 
RAD50                 0.030   RAD50 homolog isoform 1 
G3BP2                 0.026   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.026   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.026   Ras-GTPase activating protein SH3 domain-binding pro...
SLK                   0.026   serine/threonine kinase 2 
SASS6                 0.026   spindle assembly abnormal protein 6 
MIA3                  0.026   melanoma inhibitory activity family, member 3 [Homo...
DDX12                 0.026   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 [Ho...
KIAA1305              0.026   hypothetical protein LOC57523 
GOLGA6                0.026   golgi autoantigen, golgin subfamily a, 6 
DDX11                 0.023   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...
DDX11                 0.023   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...
DDX11                 0.023   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...
C14orf174             0.023   hypothetical protein LOC161394 
HDAC5                 0.023   histone deacetylase 5 isoform 3 
HDAC5                 0.023   histone deacetylase 5 isoform 1 
PLEKHA5               0.023   pleckstrin homology domain containing, family A mem...
PLEKHA5               0.023   pleckstrin homology domain containing, family A memb...
GOLGA6D               0.019   golgi autoantigen, golgin subfamily a, 6D 
LOC100129538          0.019   PREDICTED: hypothetical protein 
LOC100129538          0.019   PREDICTED: hypothetical protein 
GOLGA6C               0.019   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
LOC100129538          0.019   PREDICTED: hypothetical protein 
GOLGA6B               0.019   golgi autoantigen, golgin subfamily a, 6B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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