Guide to the Human Genome
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Name: KIAA1305 Sequence: fasta or formatted (1898aa) NCBI GI: 126723547
Description:

hypothetical protein LOC57523

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4        160           3
 C cysteine            1.4         26           1
 D aspartate           4.0         75           2
 E glutamate           5.6        106           2
 F phenylalanine       3.8         73           2
 G glycine             7.1        135           3
 H histidine           2.2         42           1
 I isoleucine          2.8         54           2
 K lysine              5.0         94           2
 L leucine            12.5        237           3
 M methionine          1.8         34           2
 N asparagine          2.2         42           2
 P proline             9.1        172           2
 Q glutamine           5.7        108           3
 R arginine            5.0         94           2
 S serine              8.3        158           2
 T threonine           5.0         94           2
 V valine              6.3        120           2
 W tryptophan          2.5         47           2
 Y tyrosine            1.4         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC57523 
KIAA0323              0.062   hypothetical protein LOC23351 
N4BP1                 0.047   Nedd4 binding protein 1 
ZC3H12A               0.034   zinc finger CCCH-type containing 12A 
ZC3H12C               0.034   zinc finger CCCH-type containing 12C 
ZC3H12B               0.033   zinc finger CCCH-type containing 12B 
ZC3H12D               0.031   zinc finger CCCH-type containing 12D 
FLJ22184              0.011   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.011   PREDICTED: hypothetical protein FLJ22184 
SON                   0.010   SON DNA-binding protein isoform F 
SON                   0.010   SON DNA-binding protein isoform B 
WNK2                  0.010   WNK lysine deficient protein kinase 2 
PCLO                  0.010   piccolo isoform 2 
PCLO                  0.010   piccolo isoform 1 
NACA                  0.010   nascent polypeptide-associated complex alpha subuni...
GIN1                  0.009   zinc finger, H2C2 domain containing 
SPEG                  0.009   SPEG complex locus 
PRG4                  0.009   proteoglycan 4 isoform D 
PRG4                  0.009   proteoglycan 4 isoform C 
PRG4                  0.009   proteoglycan 4 isoform B 
PRG4                  0.009   proteoglycan 4 isoform A 
BAT3                  0.009   HLA-B associated transcript-3 isoform b 
BAT3                  0.009   HLA-B associated transcript-3 isoform b 
BAT3                  0.009   HLA-B associated transcript-3 isoform b 
BAT3                  0.009   HLA-B associated transcript-3 isoform a 
FLJ22184              0.009   PREDICTED: hypothetical protein LOC80164 
KIAA0754              0.008   hypothetical protein LOC643314 
CIC                   0.008   capicua homolog 
C2orf55               0.008   hypothetical protein LOC343990 
AMOT                  0.008   angiomotin isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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