DDX11 31

Name: DDX11	Sequence: fasta or formatted (856aa)		NCBI GI: 100913204
Description: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 isoform 2		Referenced in: DEAD / H Helicase Family
Other entries for this name: alt prot [906aa] DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 isoform 1 alt prot [970aa] DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.9 76 2 C cysteine 2.1 18 1 D aspartate 3.5 30 2 E glutamate 9.2 79 4 F phenylalanine 3.7 32 1 G glycine 5.8 50 2 H histidine 2.1 18 1 I isoleucine 4.1 35 2 K lysine 6.0 51 3 L leucine 11.1 95 3 M methionine 2.1 18 1 N asparagine 2.7 23 1 P proline 4.6 39 2 Q glutamine 7.9 68 2 R arginine 6.9 59 3 S serine 6.5 56 3 T threonine 3.5 30 2 V valine 6.7 57 2 W tryptophan 0.4 3 1 Y tyrosine 2.2 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... DDX11 0.986 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... DDX12 0.963 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 [Ho... DDX11 0.885 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... LOC100291587 0.189 PREDICTED: similar to Putative ATP-dependent RNA he... LOC100134008 0.176 PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) ... BRIP1 0.112 BRCA1 interacting protein C-terminal helicase 1 [Hom... RTEL1 0.098 regulator of telomere elongation helicase 1 isoform ... RTEL1 0.098 regulator of telomere elongation helicase 1 isoform 1... ERCC2 0.053 excision repair cross-complementing rodent repair de... ERCC2 0.025 excision repair cross-complementing rodent repair d... LOC100287596 0.021 PREDICTED: hypothetical protein XP_002342944 LOC100288486 0.021 PREDICTED: hypothetical protein XP_002343431 LOC100287102 0.021 PREDICTED: hypothetical protein XP_002342051 MYH14 0.016 myosin, heavy chain 14 isoform 1 MYH14 0.016 myosin, heavy chain 14 isoform 2 MYH14 0.016 myosin, heavy chain 14 isoform 3 CCDC64 0.016 coiled-coil domain containing 64 TCHH 0.015 trichohyalin MAP7D2 0.015 MAP7 domain containing 2 INCENP 0.014 inner centromere protein antigens 135/155kDa isofor... INCENP 0.014 inner centromere protein antigens 135/155kDa isofor... PLEC1 0.014 plectin 1 isoform 11 PLEC1 0.014 plectin 1 isoform 10 PLEC1 0.014 plectin 1 isoform 8 PLEC1 0.014 plectin 1 isoform 7 PLEC1 0.014 plectin 1 isoform 6 PLEC1 0.014 plectin 1 isoform 3 PLEC1 0.014 plectin 1 isoform 2 PLEC1 0.014 plectin 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.