| Name: C11orf88 | Sequence: fasta or formatted (196aa) | NCBI GI: 154240722 | |
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Description: hypothetical protein LOC399949 isoform 1
| Not currently referenced in the text | ||
Other entries for this name:
alt prot {169aa} hypothetical protein LOC399949 isoform 2 | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 5.6 11 1 C cysteine 0.5 1 1 D aspartate 3.6 7 1 E glutamate 11.7 23 2 F phenylalanine 2.0 4 1 G glycine 3.1 6 1 H histidine 3.1 6 1 I isoleucine 3.6 7 1 K lysine 9.2 18 2 L leucine 8.7 17 2 M methionine 1.5 3 1 N asparagine 2.6 5 1 P proline 5.6 11 2 Q glutamine 8.2 16 1 R arginine 7.7 15 2 S serine 13.8 27 2 T threonine 2.6 5 1 V valine 4.6 9 2 W tryptophan 1.0 2 1 Y tyrosine 1.5 3 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC399949 isoform 1 C11orf88 0.804 hypothetical protein LOC399949 isoform 2 MOG 0.052 myelin oligodendrocyte glycoprotein isoform beta4 pr... MOG 0.052 myelin oligodendrocyte glycoprotein isoform alpha4 p... STK10 0.039 serine/threonine kinase 10 RUNDC2B 0.033 RUN domain containing 2B HDAC4 0.033 histone deacetylase 4 BEND2 0.033 BEN domain containing 2 CEP110 0.033 centrosomal protein 110kDa LOC645202 0.030 PREDICTED: hypothetical protein LOC645202 CSF2RA 0.030 colony stimulating factor 2 receptor alpha chain is... RTF1 0.030 Paf1/RNA polymerase II complex component RPP30 0.028 ribonuclease P/MRP 30kDa subunit isoform a TNIP1 0.028 TNFAIP3 interacting protein 1 TCHH 0.028 trichohyalin TRDN 0.025 triadin BUD13 0.025 BUD13 homolog isoform 2 BUD13 0.025 BUD13 homolog isoform 1 GOLGA3 0.025 Golgi autoantigen, golgin subfamily a, 3 LOC727832 0.022 golgi autoantigen, golgin subfamily a-like CRCP 0.022 calcitonin gene-related peptide-receptor component pr... C2orf77 0.022 hypothetical protein LOC129881 SEPN1 0.022 selenoprotein N, 1 isoform 1 precursor MAP1B 0.022 microtubule-associated protein 1B NUCKS1 0.022 nuclear casein kinase and cyclin-dependent kinase su... POLR3GL 0.022 polymerase (RNA) III (DNA directed) polypeptide G (3... KIAA1524 0.019 p90 autoantigen LOC283685 0.019 PREDICTED: golgi autoantigen, golgin subfamily a-li... SEMG2 0.019 semenogelin II precursor BAZ1B 0.019 bromodomain adjacent to zinc finger domain, 1B [Homo...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
