Guide to the Human Genome
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Name: CRCP Sequence: fasta or formatted (115aa) NCBI GI: 100913026
Description:

calcitonin gene-related peptide-receptor component protein isoform b

Referenced in:

Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [71aa] calcitonin gene-related peptide-receptor component protein isoform c
alt prot [141aa] calcitonin gene-related peptide-receptor component protein isoform d
alt prot [148aa] calcitonin gene-related peptide-receptor component protein isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         10           1
 C cysteine            0.9          1           1
 D aspartate           2.6          3           1
 E glutamate          15.7         18           2
 F phenylalanine       0.9          1           1
 G glycine             0.0          0           0
 H histidine           3.5          4           1
 I isoleucine          4.3          5           1
 K lysine              7.8          9           2
 L leucine            12.2         14           2
 M methionine          2.6          3           1
 N asparagine          5.2          6           1
 P proline             5.2          6           1
 Q glutamine           4.3          5           1
 R arginine            3.5          4           1
 S serine              7.0          8           1
 T threonine           7.8          9           1
 V valine              6.1          7           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.7          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcitonin gene-related peptide-receptor component ... 
CRCP                  0.990   calcitonin gene-related peptide-receptor component ...
CRCP                  0.915   calcitonin gene-related peptide-receptor component pr...
CRCP                  0.540   calcitonin gene-related peptide-receptor component ...
G3BP2                 0.035   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.035   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.035   Ras-GTPase activating protein SH3 domain-binding pro...
SLK                   0.035   serine/threonine kinase 2 
DDX12                 0.035   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 [Ho...
KIAA1305              0.035   hypothetical protein LOC57523 
GOLGA6                0.035   golgi autoantigen, golgin subfamily a, 6 
RAD50                 0.030   RAD50 homolog isoform 2 
RAD50                 0.030   RAD50 homolog isoform 1 
TP53BP1               0.030   tumor protein p53 binding protein 1 isoform 1 [Homo...
TP53BP1               0.030   tumor protein p53 binding protein 1 isoform 2 [Homo...
TP53BP1               0.030   tumor protein p53 binding protein 1 isoform 3 
DDX11                 0.030   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...
DDX11                 0.030   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...
DDX11                 0.030   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...
HDAC5                 0.030   histone deacetylase 5 isoform 3 
HDAC5                 0.030   histone deacetylase 5 isoform 1 
C14orf174             0.030   hypothetical protein LOC161394 
GOLGA6D               0.025   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6C               0.025   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
GOLGA6B               0.025   golgi autoantigen, golgin subfamily a, 6B 
LRRC43                0.025   leucine rich repeat containing 43 isoform 2 
SYT10                 0.025   synaptotagmin X 
LRRC43                0.025   leucine rich repeat containing 43 isoform 1 
LOC100129538          0.025   PREDICTED: hypothetical protein 
LOC100134008          0.025   PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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