Guide to the Human Genome
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Name: CRCP Sequence: fasta or formatted (71aa) NCBI GI: 100913028
Description:

calcitonin gene-related peptide-receptor component protein isoform c

Referenced in:

Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [115aa] calcitonin gene-related peptide-receptor component protein isoform b
alt prot [141aa] calcitonin gene-related peptide-receptor component protein isoform d
alt prot [148aa] calcitonin gene-related peptide-receptor component protein isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9          7           1
 C cysteine            0.0          0           0
 D aspartate           2.8          2           1
 E glutamate          21.1         15           2
 F phenylalanine       0.0          0           0
 G glycine             0.0          0           0
 H histidine           2.8          2           1
 I isoleucine          4.2          3           1
 K lysine              4.2          3           2
 L leucine            11.3          8           2
 M methionine          4.2          3           1
 N asparagine          5.6          4           1
 P proline             5.6          4           1
 Q glutamine           5.6          4           1
 R arginine            2.8          2           1
 S serine              4.2          3           1
 T threonine           7.0          5           1
 V valine              8.5          6           1
 W tryptophan          0.0          0           0
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcitonin gene-related peptide-receptor component ... 
CRCP                  0.956   calcitonin gene-related peptide-receptor component ...
CRCP                  0.956   calcitonin gene-related peptide-receptor component ...
CRCP                  0.956   calcitonin gene-related peptide-receptor component pr...
SLK                   0.053   serine/threonine kinase 2 
LRRC43                0.044   leucine rich repeat containing 43 isoform 2 
LRRC43                0.044   leucine rich repeat containing 43 isoform 1 
HDAC5                 0.035   histone deacetylase 5 isoform 3 
HDAC5                 0.035   histone deacetylase 5 isoform 1 
DDX12                 0.035   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 [Ho...
GOLGA6                0.035   golgi autoantigen, golgin subfamily a, 6 
BFSP1                 0.035   filensin isoform 1 
BFSP1                 0.035   filensin isoform 2 
DDX11                 0.035   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...
DDX11                 0.035   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...
DDX11                 0.035   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...
LOC100134008          0.027   PREDICTED: similar to DEAD/H (Asp-Glu-Ala-Asp/His) ...
G3BP2                 0.027   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.027   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.027   Ras-GTPase activating protein SH3 domain-binding pro...
STK36                 0.027   serine/threonine kinase 36 
UBL4B                 0.027   ubiquitin-like 4B 
GOLGA6D               0.027   golgi autoantigen, golgin subfamily a, 6D 
TTN                   0.027   titin isoform N2-A 
GOLGA6C               0.027   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
GOLGA6B               0.027   golgi autoantigen, golgin subfamily a, 6B 
C14orf174             0.027   hypothetical protein LOC161394 
C11orf88              0.027   hypothetical protein LOC399949 isoform 2 
TPM1                  0.018   tropomyosin 1 alpha chain isoform 7 
TPM1                  0.018   tropomyosin 1 alpha chain isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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