Guide to the Human Genome
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Name: SASS6 Sequence: fasta or formatted (657aa) NCBI GI: 35038601
Description:

spindle assembly abnormal protein 6

Referenced in:

Centrosome

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         33           2
 C cysteine            1.4          9           1
 D aspartate           4.6         30           2
 E glutamate           9.1         60           3
 F phenylalanine       3.2         21           2
 G glycine             3.8         25           1
 H histidine           2.6         17           1
 I isoleucine          3.8         25           2
 K lysine             10.4         68           2
 L leucine            13.9         91           2
 M methionine          0.8          5           1
 N asparagine          5.3         35           2
 P proline             3.7         24           2
 Q glutamine           8.8         58           3
 R arginine            3.3         22           2
 S serine              7.8         51           3
 T threonine           5.8         38           2
 V valine              5.5         36           2
 W tryptophan          0.3          2           1
 Y tyrosine            1.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   spindle assembly abnormal protein 6 
EEA1                  0.048   early endosome antigen 1, 162kD 
CEP110                0.048   centrosomal protein 110kDa 
LOC645202             0.047   PREDICTED: hypothetical protein LOC645202 
MYH9                  0.046   myosin, heavy polypeptide 9, non-muscle 
KTN1                  0.046   kinectin 1 isoform a 
KTN1                  0.046   kinectin 1 isoform c 
KTN1                  0.046   kinectin 1 isoform a 
MYH2                  0.045   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.045   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH6                  0.045   myosin heavy chain 6 
MYH1                  0.044   myosin, heavy chain 1, skeletal muscle, adult [Homo...
LOC727832             0.044   golgi autoantigen, golgin subfamily a-like 
KTN1                  0.044   kinectin 1 isoform b 
LOC440243             0.044   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC283767             0.043   golgi autoantigen, golgin subfamily a-like 
MYH7                  0.043   myosin, heavy chain 7, cardiac muscle, beta 
MYH10                 0.043   myosin, heavy polypeptide 10, non-muscle 
GOLGA4                0.043   golgi autoantigen, golgin subfamily a, 4 
MYH4                  0.043   myosin, heavy polypeptide 4, skeletal muscle 
MYH8                  0.042   myosin, heavy chain 8, skeletal muscle, perinatal [...
CCDC18                0.042   sarcoma antigen NY-SAR-41 
LOC400352             0.041   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.041   PREDICTED: similar to Putative golgin subfamily A m...
CENPE                 0.041   centromere protein E 
NUMA1                 0.041   nuclear mitotic apparatus protein 1 
MYH13                 0.041   myosin, heavy polypeptide 13, skeletal muscle [Homo...
IFT81                 0.041   intraflagellar transport 81-like isoform 1 
IFT81                 0.041   intraflagellar transport 81-like isoform 1 
LOC283685             0.041   PREDICTED: golgi autoantigen, golgin subfamily a-li...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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