Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GREM1 Sequence: fasta or formatted (184aa) NCBI GI: 7019349
Description:

gremlin-1 precursor

Referenced in:

TGF-beta Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3          8           2
 C cysteine            4.9          9           1
 D aspartate           2.7          5           1
 E glutamate           6.5         12           2
 F phenylalanine       2.7          5           1
 G glycine             7.6         14           1
 H histidine           2.2          4           1
 I isoleucine          4.3          8           2
 K lysine              8.7         16           3
 L leucine             7.6         14           5
 M methionine          2.2          4           2
 N asparagine          3.3          6           1
 P proline             7.1         13           3
 Q glutamine           7.6         14           2
 R arginine            7.6         14           1
 S serine              7.1         13           2
 T threonine           7.6         14           2
 V valine              3.3          6           1
 W tryptophan          0.5          1           1
 Y tyrosine            2.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gremlin-1 precursor 
GREM2                 0.472   gremlin 2 precursor 
CER1                  0.128   cerberus 1 
NBL1                  0.106   neuroblastoma, suppression of tumorigenicity 1 2 prec...
NBL1                  0.106   neuroblastoma, suppression of tumorigenicity 1 1 [H...
MUC2                  0.056   mucin 2 precursor 
LOC100294420          0.056   PREDICTED: similar to mucin 2 
DAND5                 0.047   dante precursor 
HNRNPUL1              0.019   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
HNRNPUL1              0.019   heterogeneous nuclear ribonucleoprotein U-like 1 iso...
MCTP1                 0.019   multiple C2 domains, transmembrane 1 isoform L [Hom...
LARP1                 0.019   la related protein isoform 2 
LARP1                 0.019   la related protein isoform 1 
MUC6                  0.017   mucin 6, gastric 
RBM26                 0.017   RNA binding motif protein 26 
MECP2                 0.014   methyl CpG binding protein 2 isoform 2 
MECP2                 0.014   methyl CpG binding protein 2 isoform 1 
RANBP2                0.014   RAN binding protein 2 
LOC100293864          0.014   PREDICTED: hypothetical protein 
LOC100290658          0.014   PREDICTED: hypothetical protein XP_002346947 
LOC100289367          0.014   PREDICTED: hypothetical protein XP_002342784 
LOC100289367          0.014   PREDICTED: similar to FLJ00248 protein 
FUBP1                 0.014   far upstream element-binding protein 
KIAA0913              0.014   hypothetical protein LOC23053 
CACNB1                0.014   calcium channel, voltage-dependent, beta 1 subunit i...
MCM10                 0.014   minichromosome maintenance complex component 10 isof...
SPTBN5                0.014   spectrin, beta, non-erythrocytic 5 
NCOR2                 0.011   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.011   nuclear receptor co-repressor 2 isoform 1 
FOXC1                 0.011   forkhead box C1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press