Guide to the Human Genome
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Name: GREM2 Sequence: fasta or formatted (168aa) NCBI GI: 71164892
Description:

gremlin 2 precursor

Referenced in:

TGF-beta Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8          8           1
 C cysteine            5.4          9           1
 D aspartate           3.0          5           1
 E glutamate           7.1         12           3
 F phenylalanine       4.2          7           1
 G glycine             3.0          5           1
 H histidine           1.2          2           1
 I isoleucine          3.0          5           1
 K lysine              9.5         16           2
 L leucine             8.9         15           1
 M methionine          1.2          2           1
 N asparagine          3.6          6           2
 P proline             5.4          9           2
 Q glutamine           6.5         11           1
 R arginine            7.1         12           1
 S serine             10.7         18           2
 T threonine           3.0          5           1
 V valine              8.3         14           2
 W tryptophan          1.8          3           1
 Y tyrosine            2.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gremlin 2 precursor 
GREM1                 0.528   gremlin-1 precursor 
NBL1                  0.146   neuroblastoma, suppression of tumorigenicity 1 2 prec...
NBL1                  0.146   neuroblastoma, suppression of tumorigenicity 1 1 [H...
CER1                  0.124   cerberus 1 
MUC2                  0.053   mucin 2 precursor 
LOC100294420          0.053   PREDICTED: similar to mucin 2 
DAND5                 0.053   dante precursor 
SOST                  0.031   sclerostin precursor 
MUC6                  0.031   mucin 6, gastric 
LOC100288069          0.025   PREDICTED: hypothetical protein XP_002342058 
PACSIN3               0.022   protein kinase C and casein kinase substrate in neur...
NCOA2                 0.019   nuclear receptor coactivator 2 
NCOA1                 0.016   nuclear receptor coactivator 1 isoform 2 
NCOA1                 0.016   nuclear receptor coactivator 1 isoform 3 
NCOA1                 0.016   nuclear receptor coactivator 1 isoform 1 
NCOA3                 0.012   nuclear receptor coactivator 3 isoform a 
NCOA3                 0.012   nuclear receptor coactivator 3 isoform b 
LOC100292002          0.012   PREDICTED: hypothetical protein XP_002344876 
LOC100291085          0.012   PREDICTED: hypothetical protein XP_002347570 
LOC100289266          0.012   PREDICTED: hypothetical protein XP_002343382 
CTGF                  0.012   connective tissue growth factor 
ZNF425                0.012   zinc finger protein 425 
OTOG                  0.009   PREDICTED: otogelin isoform 1 
OTOG                  0.009   PREDICTED: otogelin isoform 2 
OTOG                  0.009   PREDICTED: otogelin isoform 2 
OTOG                  0.009   PREDICTED: otogelin isoform 1 
OTOG                  0.009   PREDICTED: otogelin isoform 2 
OTOG                  0.009   PREDICTED: otogelin isoform 1 
FAM115C               0.009   hypothetical protein LOC285966 B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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