Guide to the Human Genome
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Name: RPS6KL1 Sequence: fasta or formatted (541aa) NCBI GI: 13899309
Description:

ribosomal protein S6 kinase-like 1

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         43           2
 C cysteine            2.4         13           2
 D aspartate           3.5         19           1
 E glutamate           7.0         38           2
 F phenylalanine       1.8         10           2
 G glycine             9.1         49           2
 H histidine           4.3         23           1
 I isoleucine          2.6         14           2
 K lysine              2.6         14           1
 L leucine            12.9         70           3
 M methionine          1.7          9           1
 N asparagine          2.0         11           1
 P proline             7.2         39           2
 Q glutamine           5.2         28           1
 R arginine            7.0         38           2
 S serine              8.7         47           2
 T threonine           5.0         27           1
 V valine              5.4         29           2
 W tryptophan          1.8         10           2
 Y tyrosine            1.8         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein S6 kinase-like 1 
RPS6KC1               0.170   ribosomal protein S6 kinase, 52kDa, polypeptide 1 i...
RPS6KC1               0.170   ribosomal protein S6 kinase, 52kDa, polypeptide 1 is...
RPS6KA3               0.090   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
RPS6KA2               0.088   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.088   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA1               0.085   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.085   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA6               0.081   ribosomal protein S6 kinase polypeptide 6 
RPS6KB1               0.076   ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...
RPS6KB2               0.070   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
PRKCD                 0.070   protein kinase C, delta 
PRKCD                 0.070   protein kinase C, delta 
RPS6KA5               0.068   ribosomal protein S6 kinase, polypeptide 5 isoform b...
RPS6KA5               0.068   ribosomal protein S6 kinase, polypeptide 5 isoform a...
PRKCQ                 0.065   protein kinase C, theta 
RPS6KA4               0.065   ribosomal protein S6 kinase, 90kDa, polypeptide 4 is...
RPS6KA4               0.065   ribosomal protein S6 kinase, 90kDa, polypeptide 4 iso...
PRKCH                 0.065   protein kinase C, eta 
AKT2                  0.065   AKT2 kinase 
PRKCA                 0.065   protein kinase C, alpha 
PRKCG                 0.065   protein kinase C, gamma 
PRKCB                 0.063   protein kinase C, beta isoform 1 
PRKCB                 0.063   protein kinase C, beta isoform 2 
ROCK2                 0.063   Rho-associated, coiled-coil containing protein kinas...
PRKCZ                 0.062   protein kinase C, zeta isoform 2 
PRKCZ                 0.062   protein kinase C, zeta isoform 2 
PRKCZ                 0.062   protein kinase C, zeta isoform 1 
PRKCE                 0.062   protein kinase C, epsilon 
PRKCI                 0.061   protein kinase C, iota 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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