Guide to the Human Genome
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Name: PRKCZ Sequence: fasta or formatted (592aa) NCBI GI: 52486327
Description:

protein kinase C, zeta isoform 1

Referenced in:

Inositol Pathways
Neurons
PDZ Domain

Other entries for this name:
alt prot [409aa] protein kinase C, zeta isoform 2
alt prot [409aa] protein kinase C, zeta isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         27           2
 C cysteine            2.7         16           1
 D aspartate           8.4         50           2
 E glutamate           7.3         43           2
 F phenylalanine       4.9         29           2
 G glycine             7.1         42           2
 H histidine           3.0         18           1
 I isoleucine          6.1         36           2
 K lysine              5.7         34           2
 L leucine             9.5         56           3
 M methionine          2.5         15           2
 N asparagine          2.5         15           1
 P proline             5.4         32           2
 Q glutamine           4.2         25           2
 R arginine            6.8         40           2
 S serine              5.9         35           3
 T threonine           4.2         25           2
 V valine              5.1         30           2
 W tryptophan          1.2          7           2
 Y tyrosine            2.9         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase C, zeta isoform 1 
PRKCI                 0.709   protein kinase C, iota 
PRKCZ                 0.675   protein kinase C, zeta isoform 2 
PRKCZ                 0.675   protein kinase C, zeta isoform 2 
PRKCE                 0.312   protein kinase C, epsilon 
PRKCH                 0.296   protein kinase C, eta 
PRKCB                 0.285   protein kinase C, beta isoform 1 
PRKCA                 0.282   protein kinase C, alpha 
PRKCB                 0.281   protein kinase C, beta isoform 2 
PRKCG                 0.266   protein kinase C, gamma 
PRKCD                 0.265   protein kinase C, delta 
PRKCD                 0.265   protein kinase C, delta 
PRKCQ                 0.254   protein kinase C, theta 
AKT2                  0.239   AKT2 kinase 
AKT1                  0.229   AKT1 kinase 
AKT1                  0.229   AKT1 kinase 
AKT1                  0.229   AKT1 kinase 
AKT3                  0.229   AKT3 kinase isoform 1 
AKT3                  0.228   AKT3 kinase isoform 2 
SGK2                  0.225   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK2                  0.225   serum/glucocorticoid regulated kinase 2 isoform beta...
SGK1                  0.220   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.220   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.220   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.220   serum/glucocorticoid regulated kinase 1 isoform 2 [...
PKN2                  0.219   protein kinase N2 
SGK3                  0.219   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.219   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
PKN1                  0.204   protein kinase N1 isoform 1 
PKN1                  0.204   protein kinase N1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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