Guide to the Human Genome
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Name: PRKCD Sequence: fasta or formatted (676aa) NCBI GI: 31377782
Description:

protein kinase C, delta

Referenced in:

Inositol Pathways
Additional Membrane Functions

Other entries for this name:
alt mRNA [676aa] protein kinase C, delta
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         39           2
 C cysteine            3.1         21           1
 D aspartate           5.9         40           3
 E glutamate           7.2         49           2
 F phenylalanine       6.8         46           2
 G glycine             6.7         45           2
 H histidine           2.8         19           2
 I isoleucine          5.8         39           2
 K lysine              8.7         59           2
 L leucine             8.4         57           2
 M methionine          2.7         18           1
 N asparagine          4.3         29           2
 P proline             3.6         24           2
 Q glutamine           3.8         26           1
 R arginine            4.9         33           2
 S serine              5.5         37           2
 T threonine           4.4         30           1
 V valine              5.3         36           2
 W tryptophan          1.3          9           2
 Y tyrosine            3.0         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase C, delta 
PRKCD                 1.000   protein kinase C, delta 
PRKCQ                 0.643   protein kinase C, theta 
PRKCE                 0.397   protein kinase C, epsilon 
PRKCH                 0.387   protein kinase C, eta 
PRKCB                 0.267   protein kinase C, beta isoform 1 
PRKCA                 0.255   protein kinase C, alpha 
PRKCB                 0.255   protein kinase C, beta isoform 2 
PRKCG                 0.246   protein kinase C, gamma 
PRKCZ                 0.232   protein kinase C, zeta isoform 1 
PRKCI                 0.230   protein kinase C, iota 
PKN1                  0.214   protein kinase N1 isoform 1 
PKN1                  0.214   protein kinase N1 isoform 2 
PKN2                  0.208   protein kinase N2 
PRKCZ                 0.208   protein kinase C, zeta isoform 2 
PRKCZ                 0.208   protein kinase C, zeta isoform 2 
AKT3                  0.195   AKT3 kinase isoform 1 
PKN3                  0.194   protein kinase PKNbeta 
AKT3                  0.193   AKT3 kinase isoform 2 
AKT2                  0.191   AKT2 kinase 
AKT1                  0.189   AKT1 kinase 
AKT1                  0.189   AKT1 kinase 
AKT1                  0.189   AKT1 kinase 
SGK1                  0.179   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.179   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.179   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.179   serum/glucocorticoid regulated kinase 1 isoform 2 [...
SGK2                  0.178   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK2                  0.178   serum/glucocorticoid regulated kinase 2 isoform beta...
SGK3                  0.176   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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