Guide to the Human Genome
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Name: PRKCZ Sequence: fasta or formatted (409aa) NCBI GI: 75709228
Description:

protein kinase C, zeta isoform 2

Referenced in:

Inositol Pathways
Neurons
PDZ Domain

Other entries for this name:
alt prot [592aa] protein kinase C, zeta isoform 1
alt mRNA [409aa] protein kinase C, zeta isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         17           2
 C cysteine            1.2          5           1
 D aspartate          10.5         43           2
 E glutamate           7.3         30           2
 F phenylalanine       5.6         23           2
 G glycine             6.4         26           2
 H histidine           2.4         10           1
 I isoleucine          7.1         29           2
 K lysine              6.1         25           2
 L leucine             9.8         40           3
 M methionine          2.7         11           2
 N asparagine          2.9         12           1
 P proline             5.4         22           2
 Q glutamine           4.2         17           1
 R arginine            4.4         18           1
 S serine              6.4         26           3
 T threonine           4.2         17           2
 V valine              5.4         22           2
 W tryptophan          1.0          4           2
 Y tyrosine            2.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase C, zeta isoform 2 
PRKCZ                 1.000   protein kinase C, zeta isoform 2 
PRKCZ                 1.000   protein kinase C, zeta isoform 1 
PRKCI                 0.744   protein kinase C, iota 
PRKCE                 0.431   protein kinase C, epsilon 
PRKCB                 0.422   protein kinase C, beta isoform 1 
PRKCA                 0.419   protein kinase C, alpha 
PRKCB                 0.416   protein kinase C, beta isoform 2 
PRKCH                 0.409   protein kinase C, eta 
PRKCG                 0.394   protein kinase C, gamma 
AKT2                  0.354   AKT2 kinase 
PRKCD                 0.352   protein kinase C, delta 
PRKCD                 0.352   protein kinase C, delta 
PRKCQ                 0.348   protein kinase C, theta 
AKT1                  0.340   AKT1 kinase 
AKT1                  0.340   AKT1 kinase 
AKT1                  0.340   AKT1 kinase 
AKT3                  0.340   AKT3 kinase isoform 1 
AKT3                  0.337   AKT3 kinase isoform 2 
SGK2                  0.333   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK2                  0.333   serum/glucocorticoid regulated kinase 2 isoform beta...
SGK1                  0.326   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.326   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.326   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.326   serum/glucocorticoid regulated kinase 1 isoform 2 [...
PKN2                  0.325   protein kinase N2 
SGK3                  0.325   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.325   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
PKN1                  0.302   protein kinase N1 isoform 1 
PKN1                  0.302   protein kinase N1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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