Guide to the Human Genome
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Name: PRKCH Sequence: fasta or formatted (683aa) NCBI GI: 28557781
Description:

protein kinase C, eta

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         34           2
 C cysteine            3.5         24           2
 D aspartate           5.1         35           3
 E glutamate           6.1         42           2
 F phenylalanine       6.1         42           2
 G glycine             7.3         50           2
 H histidine           4.0         27           2
 I isoleucine          5.4         37           2
 K lysine              5.7         39           2
 L leucine             8.9         61           2
 M methionine          2.8         19           1
 N asparagine          4.5         31           2
 P proline             4.2         29           2
 Q glutamine           4.5         31           1
 R arginine            6.0         41           3
 S serine              4.4         30           2
 T threonine           6.1         42           2
 V valine              6.6         45           2
 W tryptophan          1.2          8           2
 Y tyrosine            2.3         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase C, eta 
PRKCE                 0.639   protein kinase C, epsilon 
PRKCD                 0.380   protein kinase C, delta 
PRKCD                 0.380   protein kinase C, delta 
PRKCQ                 0.369   protein kinase C, theta 
PRKCB                 0.276   protein kinase C, beta isoform 1 
PRKCA                 0.271   protein kinase C, alpha 
PRKCB                 0.270   protein kinase C, beta isoform 2 
PRKCI                 0.263   protein kinase C, iota 
PRKCG                 0.257   protein kinase C, gamma 
PRKCZ                 0.254   protein kinase C, zeta isoform 1 
PRKCZ                 0.237   protein kinase C, zeta isoform 2 
PRKCZ                 0.237   protein kinase C, zeta isoform 2 
PKN2                  0.220   protein kinase N2 
PKN1                  0.217   protein kinase N1 isoform 1 
PKN1                  0.217   protein kinase N1 isoform 2 
AKT2                  0.215   AKT2 kinase 
AKT3                  0.215   AKT3 kinase isoform 1 
AKT1                  0.214   AKT1 kinase 
AKT1                  0.214   AKT1 kinase 
AKT1                  0.214   AKT1 kinase 
AKT3                  0.213   AKT3 kinase isoform 2 
SGK2                  0.189   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK2                  0.189   serum/glucocorticoid regulated kinase 2 isoform beta...
SGK3                  0.188   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.188   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK1                  0.187   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.187   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.187   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.187   serum/glucocorticoid regulated kinase 1 isoform 2 [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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