Guide to the Human Genome
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Name: RPS6KA3 Sequence: fasta or formatted (740aa) NCBI GI: 4759050
Description:

ribosomal protein S6 kinase, 90kDa, polypeptide 3

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         49           2
 C cysteine            0.8          6           1
 D aspartate           5.9         44           2
 E glutamate           7.2         53           3
 F phenylalanine       4.7         35           2
 G glycine             6.5         48           2
 H histidine           3.2         24           2
 I isoleucine          5.5         41           2
 K lysine              7.2         53           2
 L leucine            10.0         74           2
 M methionine          2.8         21           1
 N asparagine          2.8         21           1
 P proline             5.1         38           2
 Q glutamine           4.2         31           2
 R arginine            5.0         37           2
 S serine              6.1         45           1
 T threonine           5.5         41           1
 V valine              6.4         47           2
 W tryptophan          1.1          8           2
 Y tyrosine            3.2         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho... 
RPS6KA2               0.808   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.797   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA1               0.795   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.782   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA6               0.769   ribosomal protein S6 kinase polypeptide 6 
RPS6KA5               0.365   ribosomal protein S6 kinase, polypeptide 5 isoform a...
RPS6KA4               0.351   ribosomal protein S6 kinase, 90kDa, polypeptide 4 iso...
RPS6KA4               0.350   ribosomal protein S6 kinase, 90kDa, polypeptide 4 is...
RPS6KA5               0.274   ribosomal protein S6 kinase, polypeptide 5 isoform b...
RPS6KB1               0.240   ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...
RPS6KB2               0.232   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
AKT3                  0.182   AKT3 kinase isoform 1 
AKT3                  0.182   AKT3 kinase isoform 2 
AKT2                  0.181   AKT2 kinase 
SGK1                  0.177   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.177   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.177   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.177   serum/glucocorticoid regulated kinase 1 isoform 2 [...
AKT1                  0.177   AKT1 kinase 
AKT1                  0.177   AKT1 kinase 
AKT1                  0.177   AKT1 kinase 
SGK2                  0.173   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK2                  0.173   serum/glucocorticoid regulated kinase 2 isoform beta...
SGK3                  0.167   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.167   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
PRKCB                 0.163   protein kinase C, beta isoform 1 
PRKCB                 0.160   protein kinase C, beta isoform 2 
PKN2                  0.158   protein kinase N2 
PRKCA                 0.158   protein kinase C, alpha 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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