Guide to the Human Genome
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Name: ATCAY Sequence: fasta or formatted (371aa) NCBI GI: 29336043
Description:

caytaxin

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         18           2
 C cysteine            0.8          3           1
 D aspartate           7.8         29           2
 E glutamate          10.2         38           3
 F phenylalanine       3.0         11           1
 G glycine             5.4         20           2
 H histidine           2.2          8           1
 I isoleucine          6.5         24           2
 K lysine              3.5         13           2
 L leucine            10.5         39           2
 M methionine          3.0         11           1
 N asparagine          4.3         16           1
 P proline             6.7         25           2
 Q glutamine           2.7         10           1
 R arginine            5.9         22           3
 S serine              6.7         25           2
 T threonine           5.1         19           2
 V valine              6.5         24           2
 W tryptophan          1.3          5           1
 Y tyrosine            3.0         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   caytaxin 
PRUNE2                0.490   prune homolog 2 
BNIP2                 0.457   BCL2/adenovirus E1B 19kD interacting protein 2 [Hom...
BNIPL                 0.358   BCL2/adenovirus E1B 19kD interacting protein like i...
BNIPL                 0.313   BCL2/adenovirus E1B 19kD interacting protein like i...
ARHGAP1               0.110   Rho GTPase activating protein 1 
LOC553158             0.103   PRR5-ARHGAP8 fusion protein 
ARHGAP8               0.103   Rho GTPase activating protein 8 isoform 2 
ARHGAP8               0.083   Rho GTPase activating protein 8 isoform 1 
GDAP2                 0.052   ganglioside induced differentiation associated prot...
GDAP2                 0.050   ganglioside induced differentiation associated protei...
ACRC                  0.011   ACRC protein 
PPP1R8                0.010   protein phosphatase 1 regulatory inhibitor subunit 8...
PPP1R8                0.010   protein phosphatase 1 regulatory inhibitor subunit 8...
TTPAL                 0.010   tocopherol (alpha) transfer protein-like 
TTPAL                 0.010   tocopherol (alpha) transfer protein-like 
RLBP1                 0.010   retinaldehyde binding protein 1 
NLRP3                 0.008   NLR family, pyrin domain containing 3 isoform a [Ho...
NLRP3                 0.008   NLR family, pyrin domain containing 3 isoform c [Ho...
NLRP3                 0.008   NLR family, pyrin domain containing 3 isoform d [Ho...
NLRP3                 0.008   NLR family, pyrin domain containing 3 isoform a [Hom...
NLRP3                 0.008   NLR family, pyrin domain containing 3 isoform b [Hom...
FAM71B                0.008   family with sequence similarity 71, member B 
TTN                   0.008   titin isoform N2-A 
MLL                   0.007   myeloid/lymphoid or mixed-lineage leukemia protein [...
LOC100293317          0.007   PREDICTED: hypothetical protein 
LOC100289719          0.007   PREDICTED: hypothetical protein XP_002347085 
LOC100288715          0.007   PREDICTED: hypothetical protein XP_002342930 
DST                   0.007   dystonin isoform 1eB precursor 
CEP97                 0.007   centrosomal protein 97kDa 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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