UBR1 24685

Name: UBR1	Sequence: fasta or formatted (1749aa)		NCBI GI: 28372497
Description: ubiquitin protein ligase E3 component n-recognin 1		Referenced in: Ubiquitin and Related Protein Modifications Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 108 2 C cysteine 3.4 59 2 D aspartate 4.5 78 2 E glutamate 8.6 150 3 F phenylalanine 4.1 71 2 G glycine 4.5 78 3 H histidine 3.3 58 2 I isoleucine 6.2 109 2 K lysine 5.6 98 2 L leucine 11.2 196 3 M methionine 3.0 53 2 N asparagine 3.4 60 2 P proline 4.4 77 6 Q glutamine 5.2 91 2 R arginine 4.6 81 2 S serine 6.7 118 3 T threonine 4.3 76 2 V valine 5.9 103 2 W tryptophan 1.3 23 2 Y tyrosine 3.5 62 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin protein ligase E3 component n-recognin 1 [... UBR2 0.460 ubiquitin protein ligase E3 component n-recognin 2 [... UBR3 0.029 E3 ubiquitin-protein ligase UBR3 JAK2 0.004 Janus kinase 2 USPL1 0.003 ubiquitin specific peptidase like 1 EEA1 0.003 early endosome antigen 1, 162kD ZNF470 0.003 zinc finger protein 470 DLGAP4 0.003 disks large-associated protein 4 isoform c DLGAP4 0.003 disks large-associated protein 4 isoform b DLGAP4 0.003 disks large-associated protein 4 isoform a IKIP 0.003 IKK interacting protein isoform 1 LOC730429 0.002 PREDICTED: similar to ubiquitin protein ligase E3 c... LOC730429 0.002 PREDICTED: similar to ubiquitin protein ligase E3 c... ZNF99 0.002 zinc finger protein 99 C14orf135 0.002 hepatitis C virus F protein-binding protein 2 [Homo... TMCO5A 0.002 transmembrane and coiled-coil domains 5A TNNT3 0.002 troponin T3, skeletal, fast isoform 2 TNNT3 0.002 troponin T3, skeletal, fast isoform 3 TNNT3 0.002 troponin T3, skeletal, fast isoform 1 TNNT3 0.002 troponin T3, skeletal, fast isoform 4 UBR5 0.002 ubiquitin protein ligase E3 component n-recognin 5 [... ZBTB7C 0.002 zinc finger and BTB domain containing 7C HTT 0.002 huntingtin MYH10 0.002 myosin, heavy polypeptide 10, non-muscle KIAA1598 0.002 shootin1 isoform a KIAA1598 0.002 shootin1 isoform b ZNF253 0.002 zinc finger protein 253 AP3D1 0.002 adaptor-related protein complex 3, delta 1 subunit ... ZNF583 0.002 zinc finger protein 583 ZNF583 0.002 zinc finger protein 583 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.