CALCOCO2 31493

Name: CALCOCO2	Sequence: fasta or formatted (446aa)		NCBI GI: 5031937
Description: calcium binding and coiled-coil domain 2		Referenced in: Coiled-Coil Proteins Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.7 12 1 C cysteine 2.9 13 1 D aspartate 6.3 28 2 E glutamate 11.4 51 2 F phenylalanine 4.0 18 1 G glycine 3.6 16 2 H histidine 2.0 9 1 I isoleucine 4.9 22 2 K lysine 9.2 41 2 L leucine 9.4 42 2 M methionine 2.5 11 1 N asparagine 4.7 21 2 P proline 4.0 18 2 Q glutamine 10.1 45 3 R arginine 3.1 14 2 S serine 5.8 26 3 T threonine 4.9 22 2 V valine 4.3 19 2 W tryptophan 0.9 4 1 Y tyrosine 3.1 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calcium binding and coiled-coil domain 2 TAX1BP1 0.152 Tax1 (human T-cell leukemia virus type I) binding p... TAX1BP1 0.152 Tax1 (human T-cell leukemia virus type I) binding pr... CALCOCO1 0.117 coiled-coil transcriptional coactivator isoform 1 [H... CALCOCO1 0.063 coiled-coil transcriptional coactivator isoform 2 [... CCDC88A 0.056 coiled-coil domain containing 88A isoform 2 CCDC88A 0.056 coiled-coil domain containing 88A isoform 1 LOC100133758 0.053 PREDICTED: hypothetical protein, partial LOC400352 0.050 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.050 PREDICTED: similar to Putative golgin subfamily A m... MYH4 0.050 myosin, heavy polypeptide 4, skeletal muscle LOC283685 0.050 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC283685 0.048 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC645202 0.048 PREDICTED: hypothetical protein LOC645202 MYH10 0.047 myosin, heavy polypeptide 10, non-muscle CENPF 0.047 centromere protein F MYH9 0.047 myosin, heavy polypeptide 9, non-muscle MYH11 0.047 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.047 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.047 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.047 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CCDC88C 0.046 DVL-binding protein DAPLE CEP290 0.045 centrosomal protein 290kDa CGN 0.044 cingulin MYH15 0.044 myosin, heavy polypeptide 15 MYH2 0.044 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.044 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH13 0.043 myosin, heavy polypeptide 13, skeletal muscle [Homo... CENPE 0.043 centromere protein E LOC727832 0.043 golgi autoantigen, golgin subfamily a-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.