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Search of human proteins with 6912480
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6912480 leucine zipper, down-regulated in cancer 1 [Homo
sapiens]
(146 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6912480 leucine zipper, down-regulated in cancer 1 [Homo sapi... 299 5e-82
gi|118200337 family with sequence similarity 127, member C [Homo... 135 9e-33
gi|118200333 family with sequence similarity 127, member B isofo... 133 6e-32
gi|239757911 PREDICTED: similar to Family with sequence similari... 132 8e-32
gi|118200335 family with sequence similarity 127, member A [Homo... 131 2e-31
gi|49355807 leucine zipper, down-regulated in cancer 1-like [Hom... 79 1e-15
gi|197245393 family with sequence similarity 127, member B isofo... 67 7e-12
gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens] 63 8e-11
gi|94421473 paternally expressed 10 isoform RF1 [Homo sapiens] 60 5e-10
gi|94421475 paternally expressed 10 isoform RF1/2 [Homo sapiens] 60 5e-10
gi|199562283 retrotransposon-like 1 [Homo sapiens] 57 6e-09
gi|22749387 zinc finger, CCHC domain containing 5 [Homo sapiens] 55 2e-08
gi|126157477 hypothetical protein LOC79680 [Homo sapiens] 54 6e-08
gi|24308215 retrotransposon gag domain containing 1 [Homo sapiens] 36 0.010
gi|42740903 MTERF domain containing 2 [Homo sapiens] 31 0.33
gi|239750268 PREDICTED: hypothetical protein [Homo sapiens] 31 0.33
gi|239744576 PREDICTED: hypothetical protein XP_002343198 [Homo ... 31 0.33
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear... 31 0.43
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear... 31 0.43
gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens] 31 0.43
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 30 0.56
gi|120431745 huntingtin-associated protein 1 isoform 4 [Homo sap... 30 0.56
gi|120431743 huntingtin-associated protein 1 isoform 3 [Homo sap... 30 0.56
gi|120431738 huntingtin-associated protein 1 isoform 2 [Homo sap... 30 0.56
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 30 0.56
gi|224458288 lipoxygenase homology domains 1 isoform 2 [Homo sap... 30 0.73
gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens] 30 0.73
gi|40353734 nucleophosmin 1 isoform 2 [Homo sapiens] 30 0.73
gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens] 30 0.73
gi|55956788 nucleolin [Homo sapiens] 30 0.73
>gi|6912480 leucine zipper, down-regulated in cancer 1 [Homo
sapiens]
Length = 146
Score = 299 bits (766), Expect = 5e-82
Identities = 146/146 (100%), Positives = 146/146 (100%)
Query: 1 MVDELVLLLHALLMRHRALSIENSQLMEQLRLLVCERASLLRQVRPPSCPVPFPETFNGE 60
MVDELVLLLHALLMRHRALSIENSQLMEQLRLLVCERASLLRQVRPPSCPVPFPETFNGE
Sbjct: 1 MVDELVLLLHALLMRHRALSIENSQLMEQLRLLVCERASLLRQVRPPSCPVPFPETFNGE 60
Query: 61 SSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLTGEAEEWVVPYIEMDSPILGDYRA 120
SSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLTGEAEEWVVPYIEMDSPILGDYRA
Sbjct: 61 SSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLTGEAEEWVVPYIEMDSPILGDYRA 120
Query: 121 FLDEMKQCFGWDDDEDDDDEEEEDDY 146
FLDEMKQCFGWDDDEDDDDEEEEDDY
Sbjct: 121 FLDEMKQCFGWDDDEDDDDEEEEDDY 146
>gi|118200337 family with sequence similarity 127, member C [Homo
sapiens]
Length = 113
Score = 135 bits (341), Expect = 9e-33
Identities = 63/104 (60%), Positives = 82/104 (78%), Gaps = 4/104 (3%)
Query: 37 RASLLRQVRPPSC----PVPFPETFNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFL 92
+A L R +RP + P+PFPETF+G++ RLPEFIVQT+SYM V+EN F NDA+KV FL
Sbjct: 9 KALLARPLRPAARRWRNPIPFPETFDGDTDRLPEFIVQTSSYMFVDENTFSNDALKVTFL 68
Query: 93 ISLLTGEAEEWVVPYIEMDSPILGDYRAFLDEMKQCFGWDDDED 136
I+ LTG A +WV+PYI+ +SP+L DYR FL EMK+ FGW++DED
Sbjct: 69 ITRLTGPALQWVIPYIKKESPLLSDYRGFLAEMKRVFGWEEDED 112
>gi|118200333 family with sequence similarity 127, member B isoform
1 [Homo sapiens]
Length = 113
Score = 133 bits (334), Expect = 6e-32
Identities = 58/87 (66%), Positives = 73/87 (83%)
Query: 50 PVPFPETFNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLTGEAEEWVVPYIE 109
P+PFPETF+G++ RLPEFIVQT+SYM V+EN F NDA+KV FLI+ LTG A +WV+PYI
Sbjct: 26 PIPFPETFDGDTDRLPEFIVQTSSYMFVDENTFSNDALKVTFLITRLTGPALQWVIPYIR 85
Query: 110 MDSPILGDYRAFLDEMKQCFGWDDDED 136
+SP+L DYR FL EMK+ FGW++DED
Sbjct: 86 KESPLLNDYRGFLAEMKRVFGWEEDED 112
>gi|239757911 PREDICTED: similar to Family with sequence similarity
127, member B [Homo sapiens]
Length = 113
Score = 132 bits (333), Expect = 8e-32
Identities = 58/87 (66%), Positives = 72/87 (82%)
Query: 50 PVPFPETFNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLTGEAEEWVVPYIE 109
P+PFPETF+G++ RLPEFIVQT SYM V+EN F NDA+KV FLI+ LTG A +WV+PYI
Sbjct: 26 PIPFPETFDGDTDRLPEFIVQTCSYMFVDENTFSNDALKVTFLITRLTGPALQWVIPYIR 85
Query: 110 MDSPILGDYRAFLDEMKQCFGWDDDED 136
+SP+L DYR FL EMK+ FGW++DED
Sbjct: 86 KESPLLNDYRGFLAEMKRVFGWEEDED 112
>gi|118200335 family with sequence similarity 127, member A [Homo
sapiens]
Length = 113
Score = 131 bits (330), Expect = 2e-31
Identities = 61/104 (58%), Positives = 80/104 (76%), Gaps = 4/104 (3%)
Query: 37 RASLLRQVRPPSC----PVPFPETFNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFL 92
+A L +RP + P+PFPETF+G++ RLPEFIVQT SYM V+EN F +DA+KV FL
Sbjct: 9 KALLALPIRPATRRWRNPIPFPETFDGDTDRLPEFIVQTGSYMFVDENTFSSDALKVTFL 68
Query: 93 ISLLTGEAEEWVVPYIEMDSPILGDYRAFLDEMKQCFGWDDDED 136
I+ LTG A +WV+PYI+ +SP+L DYR FL EMK+ FGW++DED
Sbjct: 69 ITRLTGPALQWVIPYIKKESPLLNDYRGFLAEMKRVFGWEEDED 112
>gi|49355807 leucine zipper, down-regulated in cancer 1-like [Homo
sapiens]
Length = 239
Score = 79.0 bits (193), Expect = 1e-15
Identities = 33/80 (41%), Positives = 55/80 (68%)
Query: 50 PVPFPETFNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLTGEAEEWVVPYIE 109
P PE F+G+ RL F++Q +M+ +RF +A +VAFL+S LTGEAE+W +P+++
Sbjct: 98 PTSLPEPFSGDPGRLAGFLMQMDRFMIFQASRFPGEAERVAFLVSRLTGEAEKWAIPHMQ 157
Query: 110 MDSPILGDYRAFLDEMKQCF 129
DSP+ +Y+ FL E+++ +
Sbjct: 158 PDSPLRNNYQGFLAELRRTY 177
>gi|197245393 family with sequence similarity 127, member B
isoform 2 [Homo sapiens]
Length = 83
Score = 66.6 bits (161), Expect = 7e-12
Identities = 28/39 (71%), Positives = 35/39 (89%)
Query: 50 PVPFPETFNGESSRLPEFIVQTASYMLVNENRFCNDAMK 88
P+PFPETF+G++ RLPEFIVQT+SYM V+EN F NDA+K
Sbjct: 26 PIPFPETFDGDTDRLPEFIVQTSSYMFVDENTFSNDALK 64
>gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens]
Length = 569
Score = 63.2 bits (152), Expect = 8e-11
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 45 RPPSCPVPFPET--FNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLTGEAEE 102
+PP P+ PE F+G+ L EF++Q +++ +E F A +VAFLIS TGEA++
Sbjct: 142 QPPLAPLERPEIEPFSGDPVYLAEFLMQLETFIADHEVHFPGGAERVAFLISFFTGEAKD 201
Query: 103 WVVPYIEMDSPILGDYRAFLDEMKQCF 129
W + + SP+ ++ FLDE+++ F
Sbjct: 202 WAISVTQEGSPLHANFPRFLDEIRKEF 228
>gi|94421473 paternally expressed 10 isoform RF1 [Homo sapiens]
Length = 325
Score = 60.5 bits (145), Expect = 5e-10
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 25/152 (16%)
Query: 3 DELVLLLHALLMRHRALSIENSQLMEQLRLLVCERASLLRQVRPP--------------- 47
DEL ++ L + S EN+ L Q++ L E +L QV P
Sbjct: 7 DELSEEINNLREKVMKQSEENNNLQSQVQKLTEENTTLREQVEPTPEDEDDDIELRGAAA 66
Query: 48 ----------SCPVPFPETFNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLT 97
CP PE F+G L F+ Q +M + F D ++V F+ S++T
Sbjct: 67 AAAPPPPIEEECPEDLPEKFDGNPDMLAPFMAQCQIFMEKSTRDFSVDRVRVCFVTSMMT 126
Query: 98 GEAEEWVVPYIEMDSPILGDYRAFLDEMKQCF 129
G A W +E ++ +Y AF+ EMK F
Sbjct: 127 GRAARWASAKLERSHYLMHNYPAFMMEMKHVF 158
>gi|94421475 paternally expressed 10 isoform RF1/2 [Homo sapiens]
Length = 708
Score = 60.5 bits (145), Expect = 5e-10
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 25/152 (16%)
Query: 3 DELVLLLHALLMRHRALSIENSQLMEQLRLLVCERASLLRQVRPP--------------- 47
DEL ++ L + S EN+ L Q++ L E +L QV P
Sbjct: 7 DELSEEINNLREKVMKQSEENNNLQSQVQKLTEENTTLREQVEPTPEDEDDDIELRGAAA 66
Query: 48 ----------SCPVPFPETFNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLT 97
CP PE F+G L F+ Q +M + F D ++V F+ S++T
Sbjct: 67 AAAPPPPIEEECPEDLPEKFDGNPDMLAPFMAQCQIFMEKSTRDFSVDRVRVCFVTSMMT 126
Query: 98 GEAEEWVVPYIEMDSPILGDYRAFLDEMKQCF 129
G A W +E ++ +Y AF+ EMK F
Sbjct: 127 GRAARWASAKLERSHYLMHNYPAFMMEMKHVF 158
>gi|199562283 retrotransposon-like 1 [Homo sapiens]
Length = 1358
Score = 57.0 bits (136), Expect = 6e-09
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 51 VPFPETFNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLTGEAEEWVVPYIEM 110
+P P+ F+G+ EFIV + F ND ++V ++I+ L+G A EW ++
Sbjct: 200 LPAPKHFSGDRREFHEFIVLCQLTLQSYPRMFYNDRLRVGYVINHLSGLALEWAKALLQE 259
Query: 111 DSPILGDYRAFLDEMKQCF 129
+SP++GD+ AFL+ M + F
Sbjct: 260 NSPLIGDFPAFLEAMSEVF 278
>gi|22749387 zinc finger, CCHC domain containing 5 [Homo sapiens]
Length = 475
Score = 55.5 bits (132), Expect = 2e-08
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 50 PVPFPETFNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLTGEAEEWVVPYIE 109
P+ + TF+G+S +LPEF+VQ SYM V + + +A V+F+ + +G A W ++
Sbjct: 237 PLQYTLTFSGDSQKLPEFLVQLYSYMRVRGHLYPTEAALVSFVGNCFSGRAGWWFQLLLD 296
Query: 110 MDSPILGDYRAFLDEMKQCFGWDDDEDDDDEEE 142
+ SP+L +F+ ++ F D+ E+ D +
Sbjct: 297 IQSPLLEQCESFIPVLQDTF--DNPENMKDANQ 327
>gi|126157477 hypothetical protein LOC79680 [Homo sapiens]
Length = 364
Score = 53.5 bits (127), Expect = 6e-08
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 42 RQVRPPSCPVPF--PETFNGESSRLPEFIVQTASYMLVNENRFCNDAMKVAFLISLLTGE 99
R R C VP P TF+G L F+ Q YM + + ++ +V ++ LTG
Sbjct: 90 RPHRVDFCWVPGSDPGTFDGSPWLLDRFLAQLGDYMSFHFEHYQDNISRVCEILRRLTGR 149
Query: 100 AEEWVVPYIEMDSPILGDYRAFLDEMKQ 127
A+ W PY++ D P+ DY F ++K+
Sbjct: 150 AQAWAAPYLDGDLPLPDDYELFCQDLKE 177
>gi|24308215 retrotransposon gag domain containing 1 [Homo sapiens]
Length = 1388
Score = 36.2 bits (82), Expect = 0.010
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 82 FCNDAMKVAFLISLLTGEAEEWVVPYIEMDSPILGDYRAFL 122
F +D+ ++AFL+SL G AE W + +E+ P+ + ++FL
Sbjct: 1179 FLDDSERMAFLVSLHLGAAERWFILQMEVGEPLSHENKSFL 1219
>gi|42740903 MTERF domain containing 2 [Homo sapiens]
Length = 381
Score = 31.2 bits (69), Expect = 0.33
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 17/80 (21%)
Query: 66 EFIVQTASYMLVNENRFCNDAMKVAFLISLLTGEAEEWVVPYIEMDSPILGDYRAFLDEM 125
EF+ +TA C + LL E EE +S D RA LDE
Sbjct: 300 EFLARTA----------CTSVEEFQVFKKLLAREEEE-------SESSTSDDKRASLDED 342
Query: 126 KQCFGWDDDEDDDDEEEEDD 145
+ +D+++DD++E++DD
Sbjct: 343 EDDDDEEDNDEDDNDEDDDD 362
Score = 26.9 bits (58), Expect = 6.2
Identities = 9/14 (64%), Positives = 13/14 (92%)
Query: 132 DDDEDDDDEEEEDD 145
DDD++DDDE E++D
Sbjct: 359 DDDDEDDDEAEDND 372
Score = 26.6 bits (57), Expect = 8.0
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 132 DDDEDDDDEEEEDD 145
DDDEDDD+ E+ D+
Sbjct: 360 DDDEDDDEAEDNDE 373
>gi|239750268 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1154
Score = 31.2 bits (69), Expect = 0.33
Identities = 10/23 (43%), Positives = 20/23 (86%)
Query: 123 DEMKQCFGWDDDEDDDDEEEEDD 145
+++K+ +DDD+DDDD++++DD
Sbjct: 15 EQVKRKKRYDDDDDDDDDDDDDD 37
>gi|239744576 PREDICTED: hypothetical protein XP_002343198 [Homo
sapiens]
Length = 1154
Score = 31.2 bits (69), Expect = 0.33
Identities = 10/23 (43%), Positives = 20/23 (86%)
Query: 123 DEMKQCFGWDDDEDDDDEEEEDD 145
+++K+ +DDD+DDDD++++DD
Sbjct: 15 EQVKRKKRYDDDDDDDDDDDDDD 37
>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 30.8 bits (68), Expect = 0.43
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 98 GEAEEWVVPYIEMDSPILGDYRAFLDEMKQCFGWDDDEDDDDEEEEDD 145
GE EE E + D + + E ++ FG D DEDD+DE+E+++
Sbjct: 205 GEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEE 252
>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
phosphoprotein 32 family, member B [Homo sapiens]
Length = 272
Score = 30.8 bits (68), Expect = 0.43
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 98 GEAEEWVVPYIEMDSPILGDYRAFLDEMKQCFGWDDDEDDDDEEEEDD 145
GE EE E + D + + E ++ FG D DEDD+DE+E+++
Sbjct: 205 GEEEELDEEEDEDEDVEGDDDKDEVSEEEEEFGLDKDEDDEDEDEDEE 252
>gi|86262149 zinc finger and BTB domain containing 7C [Homo sapiens]
Length = 619
Score = 30.8 bits (68), Expect = 0.43
Identities = 11/14 (78%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDDEDDDDEE+E++
Sbjct: 143 DDDEDDDDEEDEEE 156
Score = 28.9 bits (63), Expect = 1.6
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 132 DDDEDDDDEEEEDD 145
DD EDDDD+E++DD
Sbjct: 137 DDKEDDDDDEDDDD 150
Score = 28.5 bits (62), Expect = 2.1
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+D+DD++EED+
Sbjct: 141 DDDDDEDDDDEEDE 154
Score = 28.1 bits (61), Expect = 2.8
Identities = 9/16 (56%), Positives = 15/16 (93%)
Query: 130 GWDDDEDDDDEEEEDD 145
G +DD++DDD++E+DD
Sbjct: 134 GEEDDKEDDDDDEDDD 149
Score = 27.3 bits (59), Expect = 4.7
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDDE+D++EEEE++
Sbjct: 148 DDDEEDEEEEEEEE 161
Score = 26.9 bits (58), Expect = 6.2
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD++DDD+EE+++
Sbjct: 142 DDDDEDDDDEEDEE 155
Score = 26.6 bits (57), Expect = 8.0
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DD++DDD+E+EE++
Sbjct: 144 DDEDDDDEEDEEEE 157
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 30.4 bits (67), Expect = 0.56
Identities = 10/14 (71%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+DDDD+++EDD
Sbjct: 267 DDDDDDDDDDDEDD 280
Score = 30.0 bits (66), Expect = 0.73
Identities = 10/14 (71%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+DDDDE++ED+
Sbjct: 270 DDDDDDDDEDDEDE 283
Score = 29.3 bits (64), Expect = 1.2
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+DDDD++++DD
Sbjct: 264 DDDDDDDDDDDDDD 277
Score = 28.9 bits (63), Expect = 1.6
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
+DDEDDDD++++DD
Sbjct: 260 EDDEDDDDDDDDDD 273
Score = 28.9 bits (63), Expect = 1.6
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+DDDD++E+D+
Sbjct: 268 DDDDDDDDDDEDDE 281
Score = 28.9 bits (63), Expect = 1.6
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+DDDD+E+++D
Sbjct: 269 DDDDDDDDDEDDED 282
Score = 28.9 bits (63), Expect = 1.6
Identities = 10/13 (76%), Positives = 13/13 (100%)
Query: 132 DDDEDDDDEEEED 144
DDD+D+DDE+EED
Sbjct: 273 DDDDDEDDEDEED 285
Score = 28.5 bits (62), Expect = 2.1
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+DD+D+E+E+D
Sbjct: 272 DDDDDDEDDEDEED 285
Score = 27.7 bits (60), Expect = 3.6
Identities = 9/23 (39%), Positives = 18/23 (78%)
Query: 123 DEMKQCFGWDDDEDDDDEEEEDD 145
D+ + G D+D++DDD++++DD
Sbjct: 250 DQEHEDDGEDEDDEDDDDDDDDD 272
Score = 27.7 bits (60), Expect = 3.6
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DD++DDDD++++DD
Sbjct: 261 DDEDDDDDDDDDDD 274
Score = 27.7 bits (60), Expect = 3.6
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
D+D+DDDD++++DD
Sbjct: 262 DEDDDDDDDDDDDD 275
Score = 27.7 bits (60), Expect = 3.6
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
+DD+DDDD++++DD
Sbjct: 263 EDDDDDDDDDDDDD 276
Score = 27.7 bits (60), Expect = 3.6
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+DDDD++++D+
Sbjct: 265 DDDDDDDDDDDDDE 278
Score = 27.7 bits (60), Expect = 3.6
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+DDDD+++++D
Sbjct: 266 DDDDDDDDDDDDED 279
Score = 26.6 bits (57), Expect = 8.0
Identities = 9/14 (64%), Positives = 13/14 (92%)
Query: 132 DDDEDDDDEEEEDD 145
DDDEDD+DEE+ ++
Sbjct: 275 DDDEDDEDEEDGEE 288
>gi|120431745 huntingtin-associated protein 1 isoform 4 [Homo
sapiens]
Length = 594
Score = 30.4 bits (67), Expect = 0.56
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 123 DEMKQCFGWDDDEDDDDEEEEDD 145
DE+ Q + D+ED+D+EEEE++
Sbjct: 250 DELLQLYSDSDEEDEDEEEEEEE 272
>gi|120431743 huntingtin-associated protein 1 isoform 3 [Homo
sapiens]
Length = 602
Score = 30.4 bits (67), Expect = 0.56
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 123 DEMKQCFGWDDDEDDDDEEEEDD 145
DE+ Q + D+ED+D+EEEE++
Sbjct: 258 DELLQLYSDSDEEDEDEEEEEEE 280
>gi|120431738 huntingtin-associated protein 1 isoform 2 [Homo
sapiens]
Length = 619
Score = 30.4 bits (67), Expect = 0.56
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 123 DEMKQCFGWDDDEDDDDEEEEDD 145
DE+ Q + D+ED+D+EEEE++
Sbjct: 250 DELLQLYSDSDEEDEDEEEEEEE 272
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 30.4 bits (67), Expect = 0.56
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 115 LGDYRAFLDEMKQCFGWDDDEDDDDEEE 142
+G+ + ++EMKQ W ++DDDDE++
Sbjct: 182 IGELKKEIEEMKQGKKWSLEDDDDDEDD 209
>gi|224458288 lipoxygenase homology domains 1 isoform 2 [Homo
sapiens]
Length = 1114
Score = 30.0 bits (66), Expect = 0.73
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 97 TGEAEEWVVPYIEMDSPILGDYRAFLDEMKQCFGWDDDEDDD 138
TG+A W V ++E+D+P LG F C W +DD
Sbjct: 138 TGKAPGWFVDWVEVDAPSLGKCMTF-----PCGRWLAKNEDD 174
>gi|83641870 nucleophosmin 1 isoform 3 [Homo sapiens]
Length = 259
Score = 30.0 bits (66), Expect = 0.73
Identities = 10/14 (71%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDDE+DDDE+++DD
Sbjct: 166 DDDEEDDDEDDDDD 179
Score = 28.5 bits (62), Expect = 2.1
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
D+D+DDDDEE++D+
Sbjct: 161 DEDDDDDDEEDDDE 174
Score = 28.5 bits (62), Expect = 2.1
Identities = 8/15 (53%), Positives = 15/15 (100%)
Query: 132 DDDEDDDDEEEEDDY 146
DD+EDDD+++++DD+
Sbjct: 167 DDEEDDDEDDDDDDF 181
Score = 27.3 bits (59), Expect = 4.7
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+DD+++++EDD
Sbjct: 163 DDDDDDEEDDDEDD 176
Score = 27.3 bits (59), Expect = 4.7
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+D++D++E+DD
Sbjct: 164 DDDDDEEDDDEDDD 177
Score = 27.3 bits (59), Expect = 4.7
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+++DD+E++DD
Sbjct: 165 DDDDEEDDDEDDDD 178
Score = 26.9 bits (58), Expect = 6.2
Identities = 9/14 (64%), Positives = 13/14 (92%)
Query: 132 DDDEDDDDEEEEDD 145
DDDEDDDD++ +D+
Sbjct: 171 DDDEDDDDDDFDDE 184
>gi|40353734 nucleophosmin 1 isoform 2 [Homo sapiens]
Length = 265
Score = 30.0 bits (66), Expect = 0.73
Identities = 10/14 (71%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDDE+DDDE+++DD
Sbjct: 166 DDDEEDDDEDDDDD 179
Score = 28.5 bits (62), Expect = 2.1
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
D+D+DDDDEE++D+
Sbjct: 161 DEDDDDDDEEDDDE 174
Score = 28.5 bits (62), Expect = 2.1
Identities = 8/15 (53%), Positives = 15/15 (100%)
Query: 132 DDDEDDDDEEEEDDY 146
DD+EDDD+++++DD+
Sbjct: 167 DDEEDDDEDDDDDDF 181
Score = 27.3 bits (59), Expect = 4.7
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+DD+++++EDD
Sbjct: 163 DDDDDDEEDDDEDD 176
Score = 27.3 bits (59), Expect = 4.7
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+D++D++E+DD
Sbjct: 164 DDDDDEEDDDEDDD 177
Score = 27.3 bits (59), Expect = 4.7
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+++DD+E++DD
Sbjct: 165 DDDDEEDDDEDDDD 178
Score = 26.9 bits (58), Expect = 6.2
Identities = 9/14 (64%), Positives = 13/14 (92%)
Query: 132 DDDEDDDDEEEEDD 145
DDDEDDDD++ +D+
Sbjct: 171 DDDEDDDDDDFDDE 184
>gi|10835063 nucleophosmin 1 isoform 1 [Homo sapiens]
Length = 294
Score = 30.0 bits (66), Expect = 0.73
Identities = 10/14 (71%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDDE+DDDE+++DD
Sbjct: 166 DDDEEDDDEDDDDD 179
Score = 28.5 bits (62), Expect = 2.1
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
D+D+DDDDEE++D+
Sbjct: 161 DEDDDDDDEEDDDE 174
Score = 28.5 bits (62), Expect = 2.1
Identities = 8/15 (53%), Positives = 15/15 (100%)
Query: 132 DDDEDDDDEEEEDDY 146
DD+EDDD+++++DD+
Sbjct: 167 DDEEDDDEDDDDDDF 181
Score = 27.3 bits (59), Expect = 4.7
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+DD+++++EDD
Sbjct: 163 DDDDDDEEDDDEDD 176
Score = 27.3 bits (59), Expect = 4.7
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+D++D++E+DD
Sbjct: 164 DDDDDEEDDDEDDD 177
Score = 27.3 bits (59), Expect = 4.7
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+++DD+E++DD
Sbjct: 165 DDDDEEDDDEDDDD 178
Score = 26.9 bits (58), Expect = 6.2
Identities = 9/14 (64%), Positives = 13/14 (92%)
Query: 132 DDDEDDDDEEEEDD 145
DDDEDDDD++ +D+
Sbjct: 171 DDDEDDDDDDFDDE 184
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 30.0 bits (66), Expect = 0.73
Identities = 10/14 (71%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDDEDD+D+++EDD
Sbjct: 248 DDDEDDEDDDDEDD 261
Score = 28.9 bits (63), Expect = 1.6
Identities = 10/13 (76%), Positives = 13/13 (100%)
Query: 132 DDDEDDDDEEEED 144
+DDEDDDD+EE+D
Sbjct: 193 EDDEDDDDDEEDD 205
Score = 28.9 bits (63), Expect = 1.6
Identities = 10/14 (71%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDDEDD++EEEE++
Sbjct: 256 DDDEDDEEEEEEEE 269
Score = 28.5 bits (62), Expect = 2.1
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
+DDEDD+D+E++DD
Sbjct: 187 EDDEDDEDDEDDDD 200
Score = 28.5 bits (62), Expect = 2.1
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
D+D++DDD++EEDD
Sbjct: 192 DEDDEDDDDDEEDD 205
Score = 28.5 bits (62), Expect = 2.1
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
+DDED+DD+++EDD
Sbjct: 240 EDDEDEDDDDDEDD 253
Score = 28.5 bits (62), Expect = 2.1
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
D+DEDDDD+E+++D
Sbjct: 242 DEDEDDDDDEDDED 255
Score = 28.5 bits (62), Expect = 2.1
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
+D++DDDDE++EDD
Sbjct: 243 EDEDDDDDEDDEDD 256
Score = 28.1 bits (61), Expect = 2.8
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
D+DE++DDE+E+DD
Sbjct: 235 DEDEEEDDEDEDDD 248
Score = 28.1 bits (61), Expect = 2.8
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
+DDEDDDDE++E++
Sbjct: 251 EDDEDDDDEDDEEE 264
Score = 27.7 bits (60), Expect = 3.6
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
+DD+D+DDEEEE++
Sbjct: 254 EDDDDEDDEEEEEE 267
Score = 27.7 bits (60), Expect = 3.6
Identities = 9/14 (64%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD++DD+EEEE++
Sbjct: 255 DDDDEDDEEEEEEE 268
Score = 27.3 bits (59), Expect = 4.7
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DD++D+DDE+++DD
Sbjct: 188 DDEDDEDDEDDDDD 201
Score = 27.3 bits (59), Expect = 4.7
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
D+D+DDD+++E+DD
Sbjct: 244 DEDDDDDEDDEDDD 257
Score = 27.3 bits (59), Expect = 4.7
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
+DD+DD+D+E++DD
Sbjct: 245 EDDDDDEDDEDDDD 258
Score = 27.3 bits (59), Expect = 4.7
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
DDD+D+DDE+++D+
Sbjct: 246 DDDDDEDDEDDDDE 259
Score = 26.9 bits (58), Expect = 6.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 123 DEMKQCFGWDDDEDDDDEEEEDD 145
DE + +D+EDD+DE+E++D
Sbjct: 146 DEEEDDDSEEDEEDDEDEDEDED 168
Score = 26.9 bits (58), Expect = 6.2
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
+D++D+DDE++EDD
Sbjct: 185 EDEDDEDDEDDEDD 198
Score = 26.9 bits (58), Expect = 6.2
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
D++EDD+DE+++DD
Sbjct: 237 DEEEDDEDEDDDDD 250
Score = 26.6 bits (57), Expect = 8.0
Identities = 8/14 (57%), Positives = 14/14 (100%)
Query: 132 DDDEDDDDEEEEDD 145
D+D+DD+D+EEE++
Sbjct: 253 DEDDDDEDDEEEEE 266
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,857,097
Number of Sequences: 37866
Number of extensions: 252290
Number of successful extensions: 5013
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3841
Number of HSP's gapped (non-prelim): 912
length of query: 146
length of database: 18,247,518
effective HSP length: 92
effective length of query: 54
effective length of database: 14,763,846
effective search space: 797247684
effective search space used: 797247684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.