LDOC1 34931

Name: LDOC1	Sequence: fasta or formatted (146aa)		NCBI GI: 6912480
Description: leucine zipper, down-regulated in cancer 1		Referenced in: NF-kappaB Pathway Kruppel-related Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 8 1 C cysteine 2.7 4 1 D aspartate 9.6 14 4 E glutamate 12.3 18 4 F phenylalanine 4.8 7 1 G glycine 2.7 4 1 H histidine 1.4 2 1 I isoleucine 3.4 5 1 K lysine 1.4 2 1 L leucine 13.7 20 3 M methionine 4.8 7 1 N asparagine 3.4 5 1 P proline 5.5 8 2 Q glutamine 3.4 5 1 R arginine 6.2 9 1 S serine 6.2 9 2 T threonine 2.1 3 1 V valine 6.8 10 2 W tryptophan 1.4 2 1 Y tyrosine 2.7 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine zipper, down-regulated in cancer 1 FAM127C 0.401 family with sequence similarity 127, member C [Homo... FAM127B 0.394 family with sequence similarity 127, member B isofo... LOC100292719 0.391 PREDICTED: similar to Family with sequence similari... FAM127A 0.387 family with sequence similarity 127, member A [Homo... LDOC1L 0.197 leucine zipper, down-regulated in cancer 1-like [Hom... FAM127B 0.153 family with sequence similarity 127, member B isofo... RGAG4 0.139 retrotransposon gag domain containing 4 PEG10 0.128 paternally expressed 10 isoform RF1 PEG10 0.128 paternally expressed 10 isoform RF1/2 RTL1 0.117 retrotransposon-like 1 ZCCHC5 0.109 zinc finger, CCHC domain containing 5 C22orf29 0.106 hypothetical protein LOC79680 RGAG1 0.040 retrotransposon gag domain containing 1 MTERFD2 0.022 MTERF domain containing 2 LOC100288514 0.022 PREDICTED: hypothetical protein LOC100288514 0.022 PREDICTED: hypothetical protein XP_002343198 LOC647020 0.022 PREDICTED: similar to acidic (leucine-rich) nuclear... LOC647020 0.022 PREDICTED: similar to acidic (leucine-rich) nuclear... ZBTB7C 0.022 zinc finger and BTB domain containing 7C ATAD2 0.018 ATPase family, AAA domain containing 2 HAP1 0.018 huntingtin-associated protein 1 isoform 4 HAP1 0.018 huntingtin-associated protein 1 isoform 3 HAP1 0.018 huntingtin-associated protein 1 isoform 2 DDX46 0.018 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 LOXHD1 0.018 lipoxygenase homology domains 1 isoform 2 NPM1 0.018 nucleophosmin 1 isoform 3 NPM1 0.018 nucleophosmin 1 isoform 2 NPM1 0.018 nucleophosmin 1 isoform 1 NCL 0.018 nucleolin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.