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Search of human proteins with 6912440
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6912440 zinc finger protein 346 [Homo sapiens]
(294 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6912440 zinc finger protein 346 [Homo sapiens] 604 e-173
gi|13375887 zinc finger, matrin type 4 isoform a [Homo sapiens] 172 3e-43
gi|209180455 zinc finger, matrin type 4 isoform b [Homo sapiens] 115 4e-26
gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens] 100 2e-21
gi|11968019 p53 target zinc finger protein isoform 1 [Homo sapiens] 66 4e-11
gi|23199978 p53 target zinc finger protein isoform 2 [Homo sapiens] 66 4e-11
gi|13375981 zinc finger protein 385D [Homo sapiens] 55 7e-08
gi|164663780 zinc finger protein 385B isoform 3 [Homo sapiens] 50 2e-06
gi|164663778 zinc finger protein 385B isoform 2 [Homo sapiens] 50 2e-06
gi|63029928 zinc finger protein 385B isoform 1 [Homo sapiens] 50 2e-06
gi|195972905 zinc finger protein 385A isoform b [Homo sapiens] 42 5e-04
gi|195972903 zinc finger protein 385A isoform a [Homo sapiens] 42 5e-04
gi|24308079 zinc finger protein 385A isoform c [Homo sapiens] 42 5e-04
gi|34101286 zinc finger RNA binding protein [Homo sapiens] 39 0.004
gi|11968150 GDNF-inducible zinc finger protein 1 [Homo sapiens] 39 0.004
gi|71061446 zinc finger protein, X-linked [Homo sapiens] 39 0.007
gi|226246537 zinc finger protein 407 isoform 3 [Homo sapiens] 38 0.012
gi|226246535 zinc finger protein 407 isoform 2 [Homo sapiens] 38 0.012
gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 38 0.012
gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 38 0.012
gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 38 0.012
gi|134133288 zinc finger protein 407 isoform 1 [Homo sapiens] 38 0.012
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s... 38 0.012
gi|120587019 zinc finger protein 318 [Homo sapiens] 38 0.012
gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo s... 38 0.012
gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo s... 38 0.012
gi|33239440 zinc finger protein, Y-linked isoform 1 [Homo sapiens] 37 0.016
gi|223717973 zinc finger protein, Y-linked isoform 3 [Homo sapiens] 37 0.016
gi|223717965 zinc finger protein, Y-linked isoform 2 [Homo sapiens] 37 0.016
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 37 0.021
>gi|6912440 zinc finger protein 346 [Homo sapiens]
Length = 294
Score = 604 bits (1558), Expect = e-173
Identities = 294/294 (100%), Positives = 294/294 (100%)
Query: 1 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE 60
MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE
Sbjct: 1 MEYPAPATVQAADGGAAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQPVGREEVE 60
Query: 61 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL 120
HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL
Sbjct: 61 HMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKL 120
Query: 121 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREM 180
DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREM
Sbjct: 121 DSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREM 180
Query: 181 IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYP 240
IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYP
Sbjct: 181 IDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYP 240
Query: 241 CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED 294
CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED
Sbjct: 241 CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED 294
>gi|13375887 zinc finger, matrin type 4 isoform a [Homo sapiens]
Length = 229
Score = 172 bits (436), Expect = 3e-43
Identities = 96/219 (43%), Positives = 129/219 (58%), Gaps = 22/219 (10%)
Query: 66 NQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQK 125
+Q LFT++ CKVC A LISESQ++AHY+S+KHA+KV+ Y +H + K+L S+
Sbjct: 7 DQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDG-GCPAKRLRSENG 65
Query: 126 SSRSK-DKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLK--------LKQQSTKVEALHQ 176
S DKN+CC +CNM+F+S VVA SHY GK HAK LK LK +T + L
Sbjct: 66 SDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPLSPLKP 125
Query: 177 NR-----------EMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRL 225
R + D D++C LC A FN+P+MAQQHY GKKH+K ++ L+ + G
Sbjct: 126 PRMDTAPVVASPYQRRDSDRYCGLCAAWFNNPLMAQQHYDGKKHKKNAARVALLEQLGTT 185
Query: 226 ADPAVTDFPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHK 264
D + Y C C + LNSIEQY AH+ G KH+
Sbjct: 186 LDMGELR-GLRRNYRCTICSVSLNSIEQYHAHLKGSKHQ 223
Score = 50.4 bits (119), Expect = 2e-06
Identities = 40/160 (25%), Positives = 60/160 (37%), Gaps = 26/160 (16%)
Query: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLKL------KQQSTKVEALHQNR----EMIDPDK 185
C +C+ S +HY + HA ++L + + L +M+D +K
Sbjct: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKNK 75
Query: 186 FCSLCHATFNDPVMAQQHYVGKKHRK-------QETKLKLMARYGRLADPAVTDFPAGKG 238
C+LC+ +F V+A HY GK H K ++T LK A P D
Sbjct: 76 CCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPLSPLKPPRMDTAPVVA 135
Query: 239 YP---------CKTCKIVLNSIEQYQAHVSGFKHKNQSPK 269
P C C N+ Q H G KHK + +
Sbjct: 136 SPYQRRDSDRYCGLCAAWFNNPLMAQQHYDGKKHKKNAAR 175
Score = 38.1 bits (87), Expect = 0.009
Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 8/91 (8%)
Query: 75 CKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQ 134
C +C A + HY KKH R + + T D R +N
Sbjct: 147 CGLCAAWFNNPLMAQQHYDGKKHKKNAARVALLEQLGTTL--------DMGELRGLRRNY 198
Query: 135 CCPICNMTFSSPVVAQSHYLGKTHAKNLKLK 165
C IC+++ +S +H G H NLK K
Sbjct: 199 RCTICSVSLNSIEQYHAHLKGSKHQTNLKNK 229
>gi|209180455 zinc finger, matrin type 4 isoform b [Homo sapiens]
Length = 153
Score = 115 bits (289), Expect = 4e-26
Identities = 67/156 (42%), Positives = 91/156 (58%), Gaps = 15/156 (9%)
Query: 66 NQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQK 125
+Q LFT++ CKVC A LISESQ++AHY+S+KHA+KV+ Y +H + K+L S+
Sbjct: 7 DQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDG-GCPAKRLRSENG 65
Query: 126 SSRSK-DKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKL---KQQSTKVEALHQNREMI 181
S DKN+CC +CNM+F+S VVA SHY GK HAK LKL ++ K L +N
Sbjct: 66 SDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYR-- 123
Query: 182 DPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLK 217
C++C + N H G KH +T LK
Sbjct: 124 -----CTICSVSLNSIEQYHAHLKGSKH---QTNLK 151
Score = 71.2 bits (173), Expect = 1e-12
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLKL------KQQSTKVEALHQNR----EMIDPDK 185
C +C+ S +HY + HA ++L + + L +M+D +K
Sbjct: 16 CKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKRLRSENGSDADMVDKNK 75
Query: 186 FCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYPCKTCK 245
C+LC+ +F V+A HY GK H K +LKL+ G T + Y C C
Sbjct: 76 CCTLCNMSFTSAVVADSHYQGKIHAK---RLKLLL--GEKTPLKTTGLR--RNYRCTICS 128
Query: 246 IVLNSIEQYQAHVSGFKHK 264
+ LNSIEQY AH+ G KH+
Sbjct: 129 VSLNSIEQYHAHLKGSKHQ 147
>gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens]
Length = 638
Score = 100 bits (249), Expect = 2e-21
Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 49 SGAQPVGREEVEHMIQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIH 108
S +Q G + Q+ LFT+ C+VC +L ESQ+++HY+ +KHA V Y +H
Sbjct: 32 SASQIAGTTDAIWNEQEKAELFTDKFCQVCGVMLQFESQRISHYEGEKHAQNVSFYFQMH 91
Query: 109 GMET-LKGETKKLDSDQ---KSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLK- 163
G + + G+ K+ + DKN+ C +CNM FSSP++AQSHY+GK HAK LK
Sbjct: 92 GEQNEVPGKKMKMHVENFQVHRYEGVDKNKFCDLCNMMFSSPLIAQSHYVGKVHAKKLKQ 151
Query: 164 LKQQSTKVEALHQNREMIDPDK--FCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMAR 221
L ++ + EM + C +C F M + H G +H+ +E+ + + +
Sbjct: 152 LMEEHDQASPSGFQPEMAFSMRTYVCHICSIAFTSLDMFRSHMQGSEHQIKESIVINLVK 211
Query: 222 YGRLADPAVTDFPA-------GKGYPCKTC 244
R + + A +G KTC
Sbjct: 212 NSRKTQDSYQNECADYINVQKARGLEAKTC 241
Score = 72.8 bits (177), Expect = 3e-13
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 20/146 (13%)
Query: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLKL-------------KQQSTKVEALHQNR-EMI 181
C +C + SHY G+ HA+N+ K+ VE +R E +
Sbjct: 58 CQVCGVMLQFESQRISHYEGEKHAQNVSFYFQMHGEQNEVPGKKMKMHVENFQVHRYEGV 117
Query: 182 DPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAG---KG 238
D +KFC LC+ F+ P++AQ HYVGK H K KLK + A P+ +
Sbjct: 118 DKNKFCDLCNMMFSSPLIAQSHYVGKVHAK---KLKQLMEEHDQASPSGFQPEMAFSMRT 174
Query: 239 YPCKTCKIVLNSIEQYQAHVSGFKHK 264
Y C C I S++ +++H+ G +H+
Sbjct: 175 YVCHICSIAFTSLDMFRSHMQGSEHQ 200
>gi|11968019 p53 target zinc finger protein isoform 1 [Homo sapiens]
Length = 289
Score = 65.9 bits (159), Expect = 4e-11
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 30/212 (14%)
Query: 75 CKVCCALLISESQKLAHYQSKKHANKVKRYLAIHG----------METLKGETKKLDSDQ 124
CK+C L S Q AHYQ K H K++ Y A + +E +
Sbjct: 72 CKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAATPVVPVPPQM 131
Query: 125 KSSRSKDK------NQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQS----TKVEAL 174
S + + N C +C+ +FSSP VAQ+HY GK HAK L+L + ++ L
Sbjct: 132 GSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSNSFSESSEL 191
Query: 175 HQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFP 234
Q R + ++F + P + V + R R D A+ P
Sbjct: 192 GQRRARKEGNEFKMM-------PNRRNMYTVQNNSAGPYFNPRSRQRIPR--DLAMCVTP 242
Query: 235 AGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQ 266
+G+ Y C C + +++ H+ +HK++
Sbjct: 243 SGQFY-CSMCNVGAGEEMEFRQHLESKQHKSK 273
Score = 39.3 bits (90), Expect = 0.004
Identities = 29/101 (28%), Positives = 36/101 (35%), Gaps = 23/101 (22%)
Query: 186 FCSLCHATFNDPVMAQQHYVGKKHRKQ------ETKLKLMARYGRLADPAVTDF------ 233
+C LC+ T N AQ HY GK H K+ AR + +PA T
Sbjct: 71 YCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAATPVVPVPPQ 130
Query: 234 -----PAGK------GYPCKTCKIVLNSIEQYQAHVSGFKH 263
P G+ CK C +S QAH G H
Sbjct: 131 MGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNH 171
Score = 32.0 bits (71), Expect = 0.67
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 17/143 (11%)
Query: 72 NTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKD 131
N CK+C A S + AHYQ K HA KR E+ +L Q+ +R K+
Sbjct: 146 NDYCKLCDASFSSPAVAQAHYQGKNHA---KRLRLAEAQSNSFSESSEL--GQRRAR-KE 199
Query: 132 KNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDK--FCSL 189
N+ + N + Q++ G N + +Q+ + A+ + P +CS+
Sbjct: 200 GNEFKMMPNR--RNMYTVQNNSAGPYF--NPRSRQRIPRDLAM-----CVTPSGQFYCSM 250
Query: 190 CHATFNDPVMAQQHYVGKKHRKQ 212
C+ + + +QH K+H+ +
Sbjct: 251 CNVGAGEEMEFRQHLESKQHKSK 273
>gi|23199978 p53 target zinc finger protein isoform 2 [Homo sapiens]
Length = 288
Score = 65.9 bits (159), Expect = 4e-11
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 31/212 (14%)
Query: 75 CKVCCALLISESQKLAHYQSKKHANKVKRYLAIHG----------METLKGETKKLDSDQ 124
CK+C L S Q AHYQ K H K++ Y A + +E +
Sbjct: 72 CKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAATPVVPVPPQM 131
Query: 125 KSSRSKDK------NQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQS----TKVEAL 174
S + + N C +C+ +FSSP VAQ+HY GK HAK L+L + ++ L
Sbjct: 132 GSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNHAKRLRLAEAQSNSFSESSEL 191
Query: 175 HQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFP 234
Q R + ++F +M + + +R D A+ P
Sbjct: 192 GQRRARKEGNEF----------KMMPNRRNMYTVQNNSGPYFNPRSRQRIPRDLAMCVTP 241
Query: 235 AGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQ 266
+G+ Y C C + +++ H+ +HK++
Sbjct: 242 SGQFY-CSMCNVGAGEEMEFRQHLESKQHKSK 272
Score = 39.3 bits (90), Expect = 0.004
Identities = 29/101 (28%), Positives = 36/101 (35%), Gaps = 23/101 (22%)
Query: 186 FCSLCHATFNDPVMAQQHYVGKKHRKQ------ETKLKLMARYGRLADPAVTDF------ 233
+C LC+ T N AQ HY GK H K+ AR + +PA T
Sbjct: 71 YCKLCNVTLNSAQQAQAHYQGKNHGKKLRNYYAANSCPPPARMSNVVEPAATPVVPVPPQ 130
Query: 234 -----PAGK------GYPCKTCKIVLNSIEQYQAHVSGFKH 263
P G+ CK C +S QAH G H
Sbjct: 131 MGSFKPGGRVILATENDYCKLCDASFSSPAVAQAHYQGKNH 171
Score = 31.6 bits (70), Expect = 0.87
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 72 NTQCKVCCALLISESQKLAHYQSKKHANKVK 102
N CK+C A S + AHYQ K HA +++
Sbjct: 146 NDYCKLCDASFSSPAVAQAHYQGKNHAKRLR 176
>gi|13375981 zinc finger protein 385D [Homo sapiens]
Length = 395
Score = 55.1 bits (131), Expect = 7e-08
Identities = 56/236 (23%), Positives = 87/236 (36%), Gaps = 25/236 (10%)
Query: 75 CKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGME---TLKGETK------KLDSDQK 125
C +C S+SQ AHY+ KHA K+K A+ + T K K ++
Sbjct: 82 CNICQLRFNSDSQAAAHYKGTKHAKKLKALEAMKNKQKSVTAKDSAKTTFTSITTNTINT 141
Query: 126 SSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQST---KVEALHQNREMID 182
SS D P + T + + S + +K K +T + E
Sbjct: 142 SSDKTDGTAGTPAISTTTTVEIRKSSVMTTEITSKVEKSPTTATGNSSCPSTETEEEKAK 201
Query: 183 PDKFCSLCHATFNDPVMAQQHYVGKKH------RKQETKLKLMARYGRLADPAVTDFPAG 236
+CSLC N + H G KH R +K R G V G
Sbjct: 202 RLLYCSLCKVAVNSASQLEAHNSGTKHKTMLEARNGSGTIKAFPRAGVKGKGPVNKGNTG 261
Query: 237 ---KGYPCKTCKIVLNSIEQYQAHVSGFKHKNQS----PKTVASSLGQIPMQRQPI 285
K + C+ C + +NS Q + H+S +HK+++ PK S ++ P+
Sbjct: 262 LQNKTFHCEICDVHVNSETQLKQHISSRRHKDRAAGKPPKPKYSPYNKLQKTAHPL 317
Score = 42.0 bits (97), Expect = 6e-04
Identities = 46/187 (24%), Positives = 71/187 (37%), Gaps = 32/187 (17%)
Query: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLKL------KQQS--------TKVEALHQNREMI 181
C IC + F+S A +HY G HAK LK KQ+S T ++ N
Sbjct: 82 CNICQLRFNSDSQAAAHYKGTKHAKKLKALEAMKNKQKSVTAKDSAKTTFTSITTNTINT 141
Query: 182 DPDKFCSLCHATFNDPVMAQQHYVG-KKHRKQETKLKLMARYGRLADPAVTDFP------ 234
DK T P ++ V +K T++ + P
Sbjct: 142 SSDK----TDGTAGTPAISTTTTVEIRKSSVMTTEITSKVEKSPTTATGNSSCPSTETEE 197
Query: 235 --AGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQ-SPKTVASSLGQIPMQ----RQPIQK 287
A + C CK+ +NS Q +AH SG KHK + + ++ P + P+ K
Sbjct: 198 EKAKRLLYCSLCKVAVNSASQLEAHNSGTKHKTMLEARNGSGTIKAFPRAGVKGKGPVNK 257
Query: 288 DSTTLED 294
+T L++
Sbjct: 258 GNTGLQN 264
>gi|164663780 zinc finger protein 385B isoform 3 [Homo sapiens]
Length = 369
Score = 50.4 bits (119), Expect = 2e-06
Identities = 36/154 (23%), Positives = 59/154 (38%), Gaps = 27/154 (17%)
Query: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFN 195
C +C + F+S A++HY G HAK +K + + +++ + CS+ T N
Sbjct: 57 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGN 116
Query: 196 DPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAG---------KGYP------ 240
+ ++ GK ++ L T P G G P
Sbjct: 117 NSDKSEDK--GKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPGTVVES 174
Query: 241 ----------CKTCKIVLNSIEQYQAHVSGFKHK 264
C CK+ +NS+ Q +AH +G KHK
Sbjct: 175 EEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHK 208
Score = 50.1 bits (118), Expect = 2e-06
Identities = 55/233 (23%), Positives = 86/233 (36%), Gaps = 57/233 (24%)
Query: 75 CKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQ 134
C VC S+SQ AHY+ KHA KVK ++ K + K + S KD +
Sbjct: 57 CNVCQLRFNSDSQAEAHYKGSKHAKKVK------ALDATKNKPKMVPS-------KDSAK 103
Query: 135 CCPICNMTFSSPVVA----QSHYLGKTHAKNLK-----------LKQQSTKVE------- 172
P C++T P+ +S GK A + LK +T +
Sbjct: 104 ANPSCSIT---PITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSP 160
Query: 173 ----------ALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKH------RKQETKL 216
+ E +CSLC N + H G KH R +
Sbjct: 161 SKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPI 220
Query: 217 KLMARYG---RLADPAVTDFPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQ 266
K R G ++ + + K + C+ C + +NS Q + H+S +HK++
Sbjct: 221 KSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDR 273
>gi|164663778 zinc finger protein 385B isoform 2 [Homo sapiens]
Length = 395
Score = 50.4 bits (119), Expect = 2e-06
Identities = 36/154 (23%), Positives = 59/154 (38%), Gaps = 27/154 (17%)
Query: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFN 195
C +C + F+S A++HY G HAK +K + + +++ + CS+ T N
Sbjct: 83 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGN 142
Query: 196 DPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAG---------KGYP------ 240
+ ++ GK ++ L T P G G P
Sbjct: 143 NSDKSEDK--GKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPGTVVES 200
Query: 241 ----------CKTCKIVLNSIEQYQAHVSGFKHK 264
C CK+ +NS+ Q +AH +G KHK
Sbjct: 201 EEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHK 234
Score = 50.1 bits (118), Expect = 2e-06
Identities = 55/233 (23%), Positives = 86/233 (36%), Gaps = 57/233 (24%)
Query: 75 CKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQ 134
C VC S+SQ AHY+ KHA KVK ++ K + K + S KD +
Sbjct: 83 CNVCQLRFNSDSQAEAHYKGSKHAKKVK------ALDATKNKPKMVPS-------KDSAK 129
Query: 135 CCPICNMTFSSPVVA----QSHYLGKTHAKNLK-----------LKQQSTKVE------- 172
P C++T P+ +S GK A + LK +T +
Sbjct: 130 ANPSCSIT---PITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSP 186
Query: 173 ----------ALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKH------RKQETKL 216
+ E +CSLC N + H G KH R +
Sbjct: 187 SKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPI 246
Query: 217 KLMARYG---RLADPAVTDFPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQ 266
K R G ++ + + K + C+ C + +NS Q + H+S +HK++
Sbjct: 247 KSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDR 299
>gi|63029928 zinc finger protein 385B isoform 1 [Homo sapiens]
Length = 471
Score = 50.4 bits (119), Expect = 2e-06
Identities = 36/154 (23%), Positives = 59/154 (38%), Gaps = 27/154 (17%)
Query: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFN 195
C +C + F+S A++HY G HAK +K + + +++ + CS+ T N
Sbjct: 159 CNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKPKMVPSKDSAKANPSCSITPITGN 218
Query: 196 DPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAG---------KGYP------ 240
+ ++ GK ++ L T P G G P
Sbjct: 219 NSDKSEDK--GKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKSTNGAPGTVVES 276
Query: 241 ----------CKTCKIVLNSIEQYQAHVSGFKHK 264
C CK+ +NS+ Q +AH +G KHK
Sbjct: 277 EEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHK 310
Score = 50.1 bits (118), Expect = 2e-06
Identities = 55/233 (23%), Positives = 86/233 (36%), Gaps = 57/233 (24%)
Query: 75 CKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQ 134
C VC S+SQ AHY+ KHA KVK ++ K + K + S KD +
Sbjct: 159 CNVCQLRFNSDSQAEAHYKGSKHAKKVK------ALDATKNKPKMVPS-------KDSAK 205
Query: 135 CCPICNMTFSSPVVA----QSHYLGKTHAKNLK-----------LKQQSTKVE------- 172
P C++T P+ +S GK A + LK +T +
Sbjct: 206 ANPSCSIT---PITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSP 262
Query: 173 ----------ALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKH------RKQETKL 216
+ E +CSLC N + H G KH R +
Sbjct: 263 SKSTNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPI 322
Query: 217 KLMARYG---RLADPAVTDFPAGKGYPCKTCKIVLNSIEQYQAHVSGFKHKNQ 266
K R G ++ + + K + C+ C + +NS Q + H+S +HK++
Sbjct: 323 KSYPRPGSRLKMQNGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDR 375
Score = 37.7 bits (86), Expect = 0.012
Identities = 44/174 (25%), Positives = 66/174 (37%), Gaps = 29/174 (16%)
Query: 116 ETKKLDSDQKSSR-SKDKNQC----CPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTK 170
E K + +D+ + SK+K + C +CN+ +S AQ H GK+H K ++KQ S
Sbjct: 11 EEKGIKNDRPEDQLSKEKKKILFSFCEVCNIQLNSAAQAQVHSNGKSHRK--RVKQLSDG 68
Query: 171 VEALHQNREMIDPDKFCSLCHAT-----FNDPVMAQQHYVGKK-----HRKQETKLKLMA 220
S CH T P + Q + K + + L
Sbjct: 69 QPPPPAQASPSSNSSTGSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVGLFP 128
Query: 221 RYGRLADP---AVTDFPAGKGYP--------CKTCKIVLNSIEQYQAHVSGFKH 263
+ + DP AV + G P C C++ NS Q +AH G KH
Sbjct: 129 NFNTM-DPVQKAVINHTFGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKH 181
Score = 31.6 bits (70), Expect = 0.87
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 241 CKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDST 290
C+ C I LNS Q Q H +G H+ + K ++ P Q P ST
Sbjct: 36 CEVCNIQLNSAAQAQVHSNGKSHRKR-VKQLSDGQPPPPAQASPSSNSST 84
>gi|195972905 zinc finger protein 385A isoform b [Homo sapiens]
Length = 305
Score = 42.4 bits (98), Expect = 5e-04
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 11/136 (8%)
Query: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFN 195
C IC + F+S A++HY G HA+ +K + + RE DP S T
Sbjct: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGST--PTNG 133
Query: 196 DPVMAQQHYVGKKHR---KQETKLKLMARYGRLADPAVTDFPA---GKGYPCKTCKIVLN 249
D V + G KH+ + + L + Y RL P + A + + C+ C + +N
Sbjct: 134 DGVAPRP---GTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNVKVN 190
Query: 250 SIEQYQAHVSGFKHKN 265
S Q + H+S +H++
Sbjct: 191 SEVQLKQHISSRRHRD 206
Score = 37.7 bits (86), Expect = 0.012
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 6/136 (4%)
Query: 75 CKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQ 134
C +C S+SQ AHY+ +HA +VK A G + D S + +
Sbjct: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDG 135
Query: 135 CCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATF 194
P + + A+S LG A + EA Q+R C +C+
Sbjct: 136 VAPRPGTKHKTILEARSG-LGPIKAYPRLGPPTPGEPEAPAQDRTF-----HCEICNVKV 189
Query: 195 NDPVMAQQHYVGKKHR 210
N V +QH ++HR
Sbjct: 190 NSEVQLKQHISSRRHR 205
>gi|195972903 zinc finger protein 385A isoform a [Homo sapiens]
Length = 386
Score = 42.4 bits (98), Expect = 5e-04
Identities = 46/212 (21%), Positives = 78/212 (36%), Gaps = 21/212 (9%)
Query: 75 CKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQ 134
C +C S+SQ AHY+ +HA +VK A G + D S + +
Sbjct: 76 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDG 135
Query: 135 CCP----ICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEA-----------LHQNRE 179
P + N +P + + + Q TK E + E
Sbjct: 136 VAPRPVSMENGLGPAPGSPEKQPGSPSPPSIPETGQGVTKGEGGTPAPASLPGGSKEEEE 195
Query: 180 MIDPDKFCSLCHATFNDPVMAQQHYVGKKHR---KQETKLKLMARYGRLADPAVTDFPA- 235
+C+LC N + H G KH+ + + L + Y RL P + A
Sbjct: 196 KAKRLLYCALCKVAVNSLSQLEAHNKGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAP 255
Query: 236 --GKGYPCKTCKIVLNSIEQYQAHVSGFKHKN 265
+ + C+ C + +NS Q + H+S +H++
Sbjct: 256 AQDRTFHCEICNVKVNSEVQLKQHISSRRHRD 287
>gi|24308079 zinc finger protein 385A isoform c [Homo sapiens]
Length = 366
Score = 42.4 bits (98), Expect = 5e-04
Identities = 46/212 (21%), Positives = 78/212 (36%), Gaps = 21/212 (9%)
Query: 75 CKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQ 134
C +C S+SQ AHY+ +HA +VK A G + D S + +
Sbjct: 56 CNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDG 115
Query: 135 CCP----ICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEA-----------LHQNRE 179
P + N +P + + + Q TK E + E
Sbjct: 116 VAPRPVSMENGLGPAPGSPEKQPGSPSPPSIPETGQGVTKGEGGTPAPASLPGGSKEEEE 175
Query: 180 MIDPDKFCSLCHATFNDPVMAQQHYVGKKHR---KQETKLKLMARYGRLADPAVTDFPA- 235
+C+LC N + H G KH+ + + L + Y RL P + A
Sbjct: 176 KAKRLLYCALCKVAVNSLSQLEAHNKGTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAP 235
Query: 236 --GKGYPCKTCKIVLNSIEQYQAHVSGFKHKN 265
+ + C+ C + +NS Q + H+S +H++
Sbjct: 236 AQDRTFHCEICNVKVNSEVQLKQHISSRRHRD 267
>gi|34101286 zinc finger RNA binding protein [Homo sapiens]
Length = 1074
Score = 39.3 bits (90), Expect = 0.004
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 186 FCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYPCKTCK 245
+C +C + P ++H G+KH+K+E LK A + + T + C+ C
Sbjct: 332 YCDVCKISCAGPQTYKEHLEGQKHKKKEAALK--ASQNTSSSNSSTRGTQNQ-LRCELCD 388
Query: 246 IVLNSIEQYQAHVSGFKHK 264
+ + Y AH+ G KH+
Sbjct: 389 VSCTGADAYAAHIRGAKHQ 407
Score = 34.7 bits (78), Expect = 0.10
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 187 CSLCHATFNDPVMAQQHYVGKKHRKQETK 215
C LC +FNDP + H G++HR Q K
Sbjct: 584 CKLCECSFNDPNAKEMHLKGRRHRLQYKK 612
Score = 32.0 bits (71), Expect = 0.67
Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFN 195
C +C ++ + P + H G+ H K + S + + + C LC +
Sbjct: 333 CDVCKISCAGPQTYKEHLEGQKHKKKEAALKASQNTSSSNSSTRGTQNQLRCELCDVSCT 392
Query: 196 DPVMAQQHYVGKKHRKQETKLKLMARYGR 224
H G KH+K +KL + G+
Sbjct: 393 GADAYAAHIRGAKHQK---VVKLHTKLGK 418
Score = 29.6 bits (65), Expect = 3.3
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 13/90 (14%)
Query: 75 CKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKNQ 134
CK+ CA H + +KH K E ++ S S+R
Sbjct: 336 CKISCA---GPQTYKEHLEGQKHKKK----------EAALKASQNTSSSNSSTRGTQNQL 382
Query: 135 CCPICNMTFSSPVVAQSHYLGKTHAKNLKL 164
C +C+++ + +H G H K +KL
Sbjct: 383 RCELCDVSCTGADAYAAHIRGAKHQKVVKL 412
>gi|11968150 GDNF-inducible zinc finger protein 1 [Homo sapiens]
Length = 711
Score = 39.3 bits (90), Expect = 0.004
Identities = 48/208 (23%), Positives = 79/208 (37%), Gaps = 25/208 (12%)
Query: 16 AAGPYSSSELLEGQEPDGVRFDRERARRLWEAVSGAQ---------PVGREEVEHMIQKN 66
A G + Q PD V + E+ + +GA+ P EE E ++
Sbjct: 251 AEGDVGDYRCPQDQSPDRVGTEMEQVSKNEGCQAGAELEELSKKAGPEEEEEEEEEDEEG 310
Query: 67 QCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGET----KKLDS 122
+ +N +C +C + E L H KH + V + ++ +T G+T L S
Sbjct: 311 EKKKSNFKCSICEKAFLYEKSFLKH---SKHRHGVATEV-VYRCDTC-GQTFANRCNLKS 365
Query: 123 DQKSSRSKDKNQCCPICNMTFSSPVVAQSHYL------GKTHAKNLKLKQQSTKVE-ALH 175
Q+ S +++ C +C F + H L G+ H K S+K LH
Sbjct: 366 HQRHVHSSERHFPCELCGKKFKRKKDVKRHVLQVHEGGGERHRCGQCGKGLSSKTALRLH 425
Query: 176 QNREMIDPDKFCSLCHATFNDPVMAQQH 203
+ D C+ C A F+ P + H
Sbjct: 426 ERTHTGDRPYGCTECGARFSQPSALKTH 453
>gi|71061446 zinc finger protein, X-linked [Homo sapiens]
Length = 805
Score = 38.5 bits (88), Expect = 0.007
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 96 KHANKVKRYLAIHG---------METLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSP 146
+H +++K+++ IH E ++ L + K+ SK+ C IC +TFS
Sbjct: 558 RHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDT 617
Query: 147 VVAQSHYL----GKTHAKNLKLKQQSTKVEALHQNREMIDPDKF---CSLCHATFNDPVM 199
Q H L KTH + L +S+ L ++ + + C +C F+ P
Sbjct: 618 KEVQQHALIHQESKTH-QCLHCDHKSSNSSDLKRHIISVHTKDYPHKCDMCDKGFHRPSE 676
Query: 200 AQQHYVGKKHRK 211
++H K +K
Sbjct: 677 LKKHVAAHKGKK 688
>gi|226246537 zinc finger protein 407 isoform 3 [Homo sapiens]
Length = 1660
Score = 37.7 bits (86), Expect = 0.012
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 3/104 (2%)
Query: 71 TNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSK 130
T +C +C L S S H +S H + K + H + + L K +
Sbjct: 184 TVLKCSICGHLFSSCSDLEKHAES--HMQQPKEHTCCHCSHKAESSSA-LHMHIKQAHGP 240
Query: 131 DKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEAL 174
K C +C S + +HYLGKTH + L + V+ L
Sbjct: 241 QKVFSCDLCGFQCSEENLLNAHYLGKTHLRRQNLAARGGFVQIL 284
Score = 30.4 bits (67), Expect = 1.9
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLK------LKQQSTKVEALHQN-REMIDPDKF-- 186
C IC FSS + H ++H + K ++ ALH + ++ P K
Sbjct: 188 CSICGHLFSSCSDLEKH--AESHMQQPKEHTCCHCSHKAESSSALHMHIKQAHGPQKVFS 245
Query: 187 CSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYG 223
C LC ++ + HY+GK H +++ L AR G
Sbjct: 246 CDLCGFQCSEENLLNAHYLGKTHLRRQ---NLAARGG 279
>gi|226246535 zinc finger protein 407 isoform 2 [Homo sapiens]
Length = 1815
Score = 37.7 bits (86), Expect = 0.012
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 3/104 (2%)
Query: 71 TNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSK 130
T +C +C L S S H +S H + K + H + + L K +
Sbjct: 184 TVLKCSICGHLFSSCSDLEKHAES--HMQQPKEHTCCHCSHKAESSSA-LHMHIKQAHGP 240
Query: 131 DKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEAL 174
K C +C S + +HYLGKTH + L + V+ L
Sbjct: 241 QKVFSCDLCGFQCSEENLLNAHYLGKTHLRRQNLAARGGFVQIL 284
Score = 30.4 bits (67), Expect = 1.9
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLK------LKQQSTKVEALHQN-REMIDPDKF-- 186
C IC FSS + H ++H + K ++ ALH + ++ P K
Sbjct: 188 CSICGHLFSSCSDLEKH--AESHMQQPKEHTCCHCSHKAESSSALHMHIKQAHGPQKVFS 245
Query: 187 CSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYG 223
C LC ++ + HY+GK H +++ L AR G
Sbjct: 246 CDLCGFQCSEENLLNAHYLGKTHLRRQ---NLAARGG 279
>gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2790
Score = 37.7 bits (86), Expect = 0.012
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 74 QCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKN 133
+C VC ++ L HY S H +K+K+ AI +GE + ++ + DK
Sbjct: 1410 KCTVCKESFTQKNILLVHYNSVSHLHKMKK-AAIDPSAPARGEA---GAPPTTTAATDKP 1465
Query: 134 QCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNRE 179
C +C ++++ + H H + + +K+E +++E
Sbjct: 1466 FKCTVCRVSYNQSSTLEIHMRSVLHQTRSRGTKTDSKIEGPERSQE 1511
Score = 36.2 bits (82), Expect = 0.035
Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 3/108 (2%)
Query: 187 CSLCHATFNDPVMAQQHYVGKKHRKQETKLKL---MARYGRLADPAVTDFPAGKGYPCKT 243
C++C +F + HY H + K + G P T K + C
Sbjct: 1411 CTVCKESFTQKNILLVHYNSVSHLHKMKKAAIDPSAPARGEAGAPPTTTAATDKPFKCTV 1470
Query: 244 CKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTT 291
C++ N + H+ H+ +S T S + P + Q K+ T
Sbjct: 1471 CRVSYNQSSTLEIHMRSVLHQTRSRGTKTDSKIEGPERSQEEPKEGET 1518
>gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 37.7 bits (86), Expect = 0.012
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 74 QCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKN 133
+C VC ++ L HY S H +K+K+ AI +GE + ++ + DK
Sbjct: 1326 KCTVCKESFTQKNILLVHYNSVSHLHKMKK-AAIDPSAPARGEA---GAPPTTTAATDKP 1381
Query: 134 QCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNRE 179
C +C ++++ + H H + + +K+E +++E
Sbjct: 1382 FKCTVCRVSYNQSSTLEIHMRSVLHQTRSRGTKTDSKIEGPERSQE 1427
Score = 36.2 bits (82), Expect = 0.035
Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 3/108 (2%)
Query: 187 CSLCHATFNDPVMAQQHYVGKKHRKQETKLKL---MARYGRLADPAVTDFPAGKGYPCKT 243
C++C +F + HY H + K + G P T K + C
Sbjct: 1327 CTVCKESFTQKNILLVHYNSVSHLHKMKKAAIDPSAPARGEAGAPPTTTAATDKPFKCTV 1386
Query: 244 CKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTT 291
C++ N + H+ H+ +S T S + P + Q K+ T
Sbjct: 1387 CRVSYNQSSTLEIHMRSVLHQTRSRGTKTDSKIEGPERSQEEPKEGET 1434
>gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
Length = 2706
Score = 37.7 bits (86), Expect = 0.012
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 74 QCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKN 133
+C VC ++ L HY S H +K+K+ AI +GE + ++ + DK
Sbjct: 1326 KCTVCKESFTQKNILLVHYNSVSHLHKMKK-AAIDPSAPARGEA---GAPPTTTAATDKP 1381
Query: 134 QCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNRE 179
C +C ++++ + H H + + +K+E +++E
Sbjct: 1382 FKCTVCRVSYNQSSTLEIHMRSVLHQTRSRGTKTDSKIEGPERSQE 1427
Score = 36.2 bits (82), Expect = 0.035
Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 3/108 (2%)
Query: 187 CSLCHATFNDPVMAQQHYVGKKHRKQETKLKL---MARYGRLADPAVTDFPAGKGYPCKT 243
C++C +F + HY H + K + G P T K + C
Sbjct: 1327 CTVCKESFTQKNILLVHYNSVSHLHKMKKAAIDPSAPARGEAGAPPTTTAATDKPFKCTV 1386
Query: 244 CKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTT 291
C++ N + H+ H+ +S T S + P + Q K+ T
Sbjct: 1387 CRVSYNQSSTLEIHMRSVLHQTRSRGTKTDSKIEGPERSQEEPKEGET 1434
>gi|134133288 zinc finger protein 407 isoform 1 [Homo sapiens]
Length = 2248
Score = 37.7 bits (86), Expect = 0.012
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 3/104 (2%)
Query: 71 TNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSK 130
T +C +C L S S H +S H + K + H + + L K +
Sbjct: 184 TVLKCSICGHLFSSCSDLEKHAES--HMQQPKEHTCCHCSHKAESSSA-LHMHIKQAHGP 240
Query: 131 DKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEAL 174
K C +C S + +HYLGKTH + L + V+ L
Sbjct: 241 QKVFSCDLCGFQCSEENLLNAHYLGKTHLRRQNLAARGGFVQIL 284
Score = 30.4 bits (67), Expect = 1.9
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 14/97 (14%)
Query: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLK------LKQQSTKVEALHQN-REMIDPDKF-- 186
C IC FSS + H ++H + K ++ ALH + ++ P K
Sbjct: 188 CSICGHLFSSCSDLEKH--AESHMQQPKEHTCCHCSHKAESSSALHMHIKQAHGPQKVFS 245
Query: 187 CSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYG 223
C LC ++ + HY+GK H +++ L AR G
Sbjct: 246 CDLCGFQCSEENLLNAHYLGKTHLRRQ---NLAARGG 279
>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
sapiens]
Length = 939
Score = 37.7 bits (86), Expect = 0.012
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 186 FCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVTDFPAGKGYPCKTCK 245
+C +C + P ++H G+KHRK+E K + P + C C
Sbjct: 272 YCDICKISCAGPQTYREHLGGQKHRKKEAAQKTGVQ------PNGSPRGVQAQLHCDLCA 325
Query: 246 IVLNSIEQYQAHVSGFKHK 264
+ + Y AH+ G KH+
Sbjct: 326 VSCTGADAYAAHIRGSKHQ 344
Score = 33.5 bits (75), Expect = 0.23
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Query: 136 CPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMIDPDKFCSLCHATFN 195
C IC ++ + P + H G+ H K K Q T V+ R + C LC +
Sbjct: 273 CDICKISCAGPQTYREHLGGQKHRK--KEAAQKTGVQPNGSPRG-VQAQLHCDLCAVSCT 329
Query: 196 DPVMAQQHYVGKKHRKQETKLKLMARYGR---LADPAV-TDFPAG 236
H G KH+K KL A+ G+ +PA+ T+ P G
Sbjct: 330 GADAYAAHIRGSKHQK---VFKLHAKLGKPIPTLEPALATESPPG 371
Score = 30.0 bits (66), Expect = 2.5
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 239 YPCKTCKIVLNSIEQYQAHVSGFKHKNQSPKTVASSLGQIPMQRQPIQKDSTTLED 294
+ CK C+ N + HV G +H+ Q K V L P+ +P + LE+
Sbjct: 468 FHCKLCECSFNDLNAKDLHVRGRRHRLQYRKKVNPDL---PIATEPSSRARKVLEE 520
Score = 28.9 bits (63), Expect = 5.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 187 CSLCHATFNDPVMAQQHYVGKKHRKQETK 215
C LC +FND H G++HR Q K
Sbjct: 470 CKLCECSFNDLNAKDLHVRGRRHRLQYRK 498
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 37.7 bits (86), Expect = 0.012
Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 20/125 (16%)
Query: 111 ETLKGETKKLDSDQKSSRSKDK-NQCCPICNMTFSSPVVAQSHYLGKTHAKNL------- 162
E+ + TK+LD + D N C CN + +H K H + L
Sbjct: 1042 ESPQSATKQLDQPTAAYEYYDAGNHWCKDCNTICGTMFDFFTHMHNKKHTQTLDPYNRPW 1101
Query: 163 -KLKQQSTKVEALHQNREMIDPDK-----------FCSLCHATFNDPVMAQQHYVGKKHR 210
Q K +A+ + ++ P K +C LC DP+ +QH G +H
Sbjct: 1102 ASKTQSEAKQDAIKRTDKITVPAKGSEFLVPISGFYCQLCEEFLGDPISGEQHVKGHQHN 1161
Query: 211 KQETK 215
++ K
Sbjct: 1162 EKYKK 1166
>gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo
sapiens]
Length = 576
Score = 37.7 bits (86), Expect = 0.012
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 113 LKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVE 172
LK E DSD+ + CP C+ +F + ++H K H + + L +Q + E
Sbjct: 293 LKDEEDGKDSDEAEDAELYDDLYCPACDKSFKTEKAMKNHEKSKKHREMVALLKQQLEEE 352
Query: 173 ALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETK 215
+ +R ID + D A + + KK +K++ K
Sbjct: 353 EENFSRPQIDENPLDDNSEEEMED---APKQKLSKKQKKKKQK 392
>gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo
sapiens]
Length = 531
Score = 37.7 bits (86), Expect = 0.012
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 113 LKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVE 172
LK E DSD+ + CP C+ +F + ++H K H + + L +Q + E
Sbjct: 293 LKDEEDGKDSDEAEDAELYDDLYCPACDKSFKTEKAMKNHEKSKKHREMVALLKQQLEEE 352
Query: 173 ALHQNREMIDPDKFCSLCHATFNDPVMAQQHYVGKKHRKQETK 215
+ +R ID + D A + + KK +K++ K
Sbjct: 353 EENFSRPQIDENPLDDNSEEEMED---APKQKLSKKQKKKKQK 392
>gi|33239440 zinc finger protein, Y-linked isoform 1 [Homo sapiens]
Length = 801
Score = 37.4 bits (85), Expect = 0.016
Identities = 45/210 (21%), Positives = 82/210 (39%), Gaps = 51/210 (24%)
Query: 96 KHANKVKRYLAIHG---------METLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSP 146
+H +++++++ IH E ++ L + K+ SK+ C IC +TFS
Sbjct: 554 RHPSELRKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDT 613
Query: 147 VVAQSHYL----GKTHAKNLKLKQQSTKVEALHQNREMIDPDKF---CSLCHATFNDPVM 199
Q H L KTH + L +S+ L ++ + + C +C F+ P
Sbjct: 614 KEVQQHTLVHQESKTH-QCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSE 672
Query: 200 AQQHYVGKKHRKQETKLKLMARY--GRLADPAV----------TDFPAGKGYPCKTCKIV 247
++H K +K R+ ++ADP V D P + CK C+
Sbjct: 673 LKKHVAVHKGKKMH-----QCRHCDFKIADPFVLSRHILSVHTKDLP----FRCKRCR-- 721
Query: 248 LNSIEQYQAHVSGFKHKNQSPKTVASSLGQ 277
GF+ +N+ K + + G+
Sbjct: 722 -----------KGFRQQNELKKHMKTHSGR 740
>gi|223717973 zinc finger protein, Y-linked isoform 3 [Homo sapiens]
Length = 610
Score = 37.4 bits (85), Expect = 0.016
Identities = 45/210 (21%), Positives = 82/210 (39%), Gaps = 51/210 (24%)
Query: 96 KHANKVKRYLAIHG---------METLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSP 146
+H +++++++ IH E ++ L + K+ SK+ C IC +TFS
Sbjct: 363 RHPSELRKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDT 422
Query: 147 VVAQSHYL----GKTHAKNLKLKQQSTKVEALHQNREMIDPDKF---CSLCHATFNDPVM 199
Q H L KTH + L +S+ L ++ + + C +C F+ P
Sbjct: 423 KEVQQHTLVHQESKTH-QCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSE 481
Query: 200 AQQHYVGKKHRKQETKLKLMARY--GRLADPAV----------TDFPAGKGYPCKTCKIV 247
++H K +K R+ ++ADP V D P + CK C+
Sbjct: 482 LKKHVAVHKGKKMH-----QCRHCDFKIADPFVLSRHILSVHTKDLP----FRCKRCR-- 530
Query: 248 LNSIEQYQAHVSGFKHKNQSPKTVASSLGQ 277
GF+ +N+ K + + G+
Sbjct: 531 -----------KGFRQQNELKKHMKTHSGR 549
>gi|223717965 zinc finger protein, Y-linked isoform 2 [Homo sapiens]
Length = 724
Score = 37.4 bits (85), Expect = 0.016
Identities = 45/210 (21%), Positives = 82/210 (39%), Gaps = 51/210 (24%)
Query: 96 KHANKVKRYLAIHG---------METLKGETKKLDSDQKSSRSKDKNQCCPICNMTFSSP 146
+H +++++++ IH E ++ L + K+ SK+ C IC +TFS
Sbjct: 477 RHPSELRKHMRIHTGEKPYQCQYCEYRSADSSNLKTHIKTKHSKEMPFKCDICLLTFSDT 536
Query: 147 VVAQSHYL----GKTHAKNLKLKQQSTKVEALHQNREMIDPDKF---CSLCHATFNDPVM 199
Q H L KTH + L +S+ L ++ + + C +C F+ P
Sbjct: 537 KEVQQHTLVHQESKTH-QCLHCDHKSSNSSDLKRHVISVHTKDYPHKCEMCEKGFHRPSE 595
Query: 200 AQQHYVGKKHRKQETKLKLMARY--GRLADPAV----------TDFPAGKGYPCKTCKIV 247
++H K +K R+ ++ADP V D P + CK C+
Sbjct: 596 LKKHVAVHKGKKMH-----QCRHCDFKIADPFVLSRHILSVHTKDLP----FRCKRCR-- 644
Query: 248 LNSIEQYQAHVSGFKHKNQSPKTVASSLGQ 277
GF+ +N+ K + + G+
Sbjct: 645 -----------KGFRQQNELKKHMKTHSGR 663
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 37.0 bits (84), Expect = 0.021
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 74 QCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDSDQKSSRSKDKN 133
+C VC ++ L HY S H +K+K+ L E + +S + +K
Sbjct: 1497 KCTVCKESFTQKNILLVHYNSVSHLHKLKKVLQ---------EASSPVPQETNSNTDNKP 1547
Query: 134 QCCPICNMTFSSPVVAQSH---YLGKTHAKNLKLK 165
C ICN+ +S + H L +T A+ KL+
Sbjct: 1548 YKCSICNVAYSQSSTLEIHMRSVLHQTKARAAKLE 1582
Score = 34.7 bits (78), Expect = 0.10
Identities = 48/209 (22%), Positives = 76/209 (36%), Gaps = 20/209 (9%)
Query: 68 CLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGME----TLKGETKKLDSD 123
C + +C+VC ++ H QS KH N V+ +G + + L
Sbjct: 694 CGYKPFRCEVCNYSTTTKGNLSIHMQSDKHLNNVQNLQNGNGEQVFGHSAPAPNTSLSGC 753
Query: 124 QKSSRSKDKNQ---CCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTK--VEALHQNR 178
S SK K + C +C+ + + H + H N+ L QQ+ K LH
Sbjct: 754 GTPSPSKPKQKPTWRCEVCDYETNVARNLRIHMTSEKHMHNMMLLQQNMKQIQHNLHLGL 813
Query: 179 EMIDPDKF-------CSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLADPAVT 231
+ + + L +P Q + T L G L+ P ++
Sbjct: 814 APAEAELYQYYLAQNIGLTGMKLENPA-DPQLMINPFQLDPATAAALAPGLGELS-PYIS 871
Query: 232 DFPAGKGYPCKTC-KIVLNSIEQYQAHVS 259
D PA K + C C K +S+E HVS
Sbjct: 872 D-PALKLFQCAVCNKFTSDSLEALSVHVS 899
Score = 31.2 bits (69), Expect = 1.1
Identities = 54/227 (23%), Positives = 81/227 (35%), Gaps = 21/227 (9%)
Query: 4 PAPATVQAADGGAAGPYSSSELLE-GQEPDGVRFDRERARRLWEAVSGAQPVGREEVEHM 62
PA A A G PY S L+ Q +F + L VS + + EE +
Sbjct: 853 PATAAALAPGLGELSPYISDPALKLFQCAVCNKFTSDSLEALSVHVSSERSLPEEEWRAV 912
Query: 63 IQKNQCLFTNTQCKVCCALLISESQKLAHYQSKKHANKVKRYLAIHGMETLKGETKKLDS 122
I QCK+C ++ H ++ KH K + L H E K +L
Sbjct: 913 IGDIY------QCKLCNYNTQLKANFQLHCKTDKHMQKYQ--LVAHIKEGGKSNEWRLKC 964
Query: 123 DQKSSRSKDKNQCCPICNMTFSSPVVAQSHYLGKTHAKNLKLKQQSTKVEALHQNREMID 182
+ K C C+ +S + H H LKL + K E ++
Sbjct: 965 IAIGNPVHLK---CNACDYYTNSVDKLRLHTTNHRHEAALKLYKHLQKQEGA------VN 1015
Query: 183 PDK---FCSLCHATFNDPVMAQQHYVGKKHRKQETKLKLMARYGRLA 226
P+ +C++C T + QH KH++ E KL LA
Sbjct: 1016 PESCYYYCAVCDYTTKVKLNLVQHVRSVKHQQTEGLRKLQLHQQGLA 1062
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.128 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,532,043
Number of Sequences: 37866
Number of extensions: 501698
Number of successful extensions: 2317
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 1899
Number of HSP's gapped (non-prelim): 393
length of query: 294
length of database: 18,247,518
effective HSP length: 101
effective length of query: 193
effective length of database: 14,423,052
effective search space: 2783649036
effective search space used: 2783649036
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.