Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: DNAJC21 Sequence: fasta or formatted (576aa) NCBI GI: 68077168
Description:

DnaJ homology subfamily A member 5 isoform 1

Referenced in:

Heat-Shock Proteins and Chaperonins

Other entries for this name:
alt prot [531aa] DnaJ homology subfamily A member 5 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         44           2
 C cysteine            1.7         10           1
 D aspartate           8.2         47           2
 E glutamate          12.8         74           5
 F phenylalanine       3.1         18           1
 G glycine             3.5         20           2
 H histidine           2.3         13           1
 I isoleucine          1.4          8           2
 K lysine             12.3         71           4
 L leucine             6.8         39           2
 M methionine          2.6         15           1
 N asparagine          4.5         26           1
 P proline             4.0         23           1
 Q glutamine           5.2         30           2
 R arginine            5.6         32           2
 S serine              6.2         36           4
 T threonine           3.0         17           2
 V valine              4.5         26           2
 W tryptophan          1.2          7           1
 Y tyrosine            3.5         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ homology subfamily A member 5 isoform 1 
DNAJC21               0.898   DnaJ homology subfamily A member 5 isoform 2 
DNAJC2                0.065   DnaJ (Hsp40) homolog, subfamily C, member 2 isoform...
DNAJC2                0.064   DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ...
DNAJB6                0.057   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.057   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
DNAJB3                0.055   DnaJ (Hsp40) homolog, subfamily B, member 3 
DNAJB8                0.055   DnaJ homolog, subfamily B, member 8 
DNAJB4                0.051   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJB7                0.050   DnaJ (Hsp40) homolog, subfamily B, member 7 
DNAJA4                0.050   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.050   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB5                0.049   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.049   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.049   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJB1                0.048   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJB2                0.047   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.047   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB12               0.047   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.047   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJA1                0.046   DnaJ (Hsp40) homolog, subfamily A, member 1 
DNAJC18               0.045   DnaJ (Hsp40) homolog, subfamily C, member 18 
DNAJB14               0.044   DnaJ (Hsp40) homolog, subfamily B, member 14 isoform...
DNAJB11               0.043   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...
DNAJB13               0.042   testis spermatogenesis apoptosis-related protein 6 [...
DNAJA2                0.041   DnaJ subfamily A member 2 
DNAJC16               0.040   DnaJ (Hsp40) homolog, subfamily C, member 16 
DNAJC11               0.039   DnaJ (Hsp40) homolog, subfamily C, member 11 
DNAJC5B               0.038   DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho...
DNAJC5                0.036   DnaJ (Hsp40) homolog, subfamily C, member 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press