Guide to the Human Genome
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Name: ZNF407 Sequence: fasta or formatted (1660aa) NCBI GI: 226246537
Description:

zinc finger protein 407 isoform 3

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [2248aa] zinc finger protein 407 isoform 1
alt prot [1815aa] zinc finger protein 407 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         87           2
 C cysteine            3.8         63           2
 D aspartate           4.5         75           2
 E glutamate           9.5        157           3
 F phenylalanine       3.0         50           2
 G glycine             6.7        112           3
 H histidine           4.9         82           1
 I isoleucine          3.8         63           2
 K lysine              7.8        130           4
 L leucine             7.7        128           2
 M methionine          2.3         38           2
 N asparagine          5.0         83           2
 P proline             3.1         52           2
 Q glutamine           4.0         67           2
 R arginine            5.0         83           3
 S serine             11.1        185           3
 T threonine           5.7         94           3
 V valine              5.2         87           2
 W tryptophan          0.0          0           0
 Y tyrosine            1.4         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 407 isoform 3 
ZNF407                0.980   zinc finger protein 407 isoform 2 
ZNF407                0.980   zinc finger protein 407 isoform 1 
ZNF624                0.023   zinc finger protein 624 
ZNF699                0.022   zinc finger protein 699 
ZNF121                0.022   zinc finger protein 121 
CTCFL                 0.022   CCCTC-binding factor-like protein 
ZSCAN12               0.021   zinc finger and SCAN domain containing 12 
ZNF347                0.021   zinc finger protein 347 
ZNF700                0.021   zinc finger protein 700 
ZNF235                0.021   zinc finger protein 93 homolog 
ZNF846                0.020   zinc finger protein 846 
ZNF85                 0.020   zinc finger protein 85 
ZNF267                0.020   zinc finger protein 267 
ZNF329                0.020   zinc finger protein 329 
ZNF778                0.020   zinc finger protein 778 
ZNF41                 0.020   zinc finger protein 41 
ZNF41                 0.020   zinc finger protein 41 
ZNF569                0.020   zinc finger protein 569 
ZNF43                 0.020   zinc finger protein 43 
ZNF585B               0.020   zinc finger protein 585B 
LOC729747             0.020   similar to zinc finger protein 709 
ZNF782                0.020   zinc finger protein 782 
ZNF33B                0.020   zinc finger protein 33B 
ZNF146                0.020   zinc finger protein 146 
ZNF146                0.020   zinc finger protein 146 
ZNF146                0.020   zinc finger protein 146 
ZNF333                0.020   zinc finger protein 333 
LOC344065             0.019   PREDICTED: similar to zinc finger protein 570 [Homo...
LOC344065             0.019   PREDICTED: similar to zinc finger protein 570 [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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