ZMAT1 33655

Name: ZMAT1	Sequence: fasta or formatted (638aa)		NCBI GI: 58533176
Description: zinc finger, matrin type 1 isoform 1		Referenced in: Zinc Finger Proteins
Other entries for this name: alt prot [467aa] zinc finger, matrin type 1 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.9 25 2 C cysteine 2.8 18 1 D aspartate 5.0 32 1 E glutamate 10.0 64 3 F phenylalanine 3.8 24 1 G glycine 3.6 23 1 H histidine 5.0 32 1 I isoleucine 3.1 20 1 K lysine 9.4 60 4 L leucine 5.5 35 1 M methionine 3.3 21 2 N asparagine 3.0 19 2 P proline 4.2 27 1 Q glutamine 6.7 43 2 R arginine 7.2 46 2 S serine 10.2 65 2 T threonine 3.9 25 2 V valine 5.2 33 2 W tryptophan 0.5 3 1 Y tyrosine 3.6 23 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 zinc finger, matrin type 1 isoform 1 ZMAT1 0.726 zinc finger, matrin type 1 isoform 3 KRCC1 0.242 lysine-rich coiled-coil 1 ZMAT4 0.082 zinc finger, matrin type 4 isoform b ZMAT4 0.063 zinc finger, matrin type 4 isoform a ZNF346 0.058 zinc finger protein 346 FAM76A 0.032 hypothetical protein LOC199870 isoform 2 FAM76A 0.032 hypothetical protein LOC199870 isoform 1 ADRA1A 0.030 alpha-1A-adrenergic receptor isoform 2 NKAP 0.029 NFKB activating protein ZMAT3 0.027 p53 target zinc finger protein isoform 1 ZMAT3 0.027 p53 target zinc finger protein isoform 2 C11orf80 0.026 hypothetical protein LOC79703 LOC100133599 0.025 PREDICTED: hypothetical protein LOC100133599 0.025 PREDICTED: hypothetical protein BAZ1A 0.023 bromodomain adjacent to zinc finger domain, 1A isofo... BAZ1A 0.023 bromodomain adjacent to zinc finger domain, 1A isofo... BCAS4 0.023 breast carcinoma amplified sequence 4 isoform a [Hom... MAP4K1 0.023 mitogen-activated protein kinase kinase kinase kinase... ANKRD11 0.023 ankyrin repeat domain 11 ARGFX 0.023 arginine-fifty homeobox LOC100131202 0.023 PREDICTED: hypothetical protein LOC100294088 0.023 PREDICTED: hypothetical protein, partial SORBS1 0.022 sorbin and SH3 domain containing 1 isoform 4 LOC100131202 0.021 PREDICTED: hypothetical protein EIF5B 0.021 eukaryotic translation initiation factor 5B RPGRIP1L 0.021 RPGRIP1-like isoform a SLC36A3 0.021 solute carrier family 36, member 3 isoform 1 FAM133A 0.021 hypothetical protein LOC286499 IFT20 0.020 intraflagellar transport protein IFT20 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.