Guide to the Human Genome
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Name: N4BP1 Sequence: fasta or formatted (896aa) NCBI GI: 48928019
Description:

Nedd4 binding protein 1

Referenced in:

Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         54           2
 C cysteine            1.8         16           2
 D aspartate           5.0         45           2
 E glutamate           9.2         82           2
 F phenylalanine       4.4         39           2
 G glycine             4.9         44           2
 H histidine           2.3         21           1
 I isoleucine          4.9         44           2
 K lysine              5.6         50           2
 L leucine            10.5         94           4
 M methionine          2.0         18           1
 N asparagine          4.6         41           2
 P proline             6.8         61           2
 Q glutamine           5.2         47           2
 R arginine            5.0         45           2
 S serine              7.9         71           3
 T threonine           6.0         54           2
 V valine              5.7         51           2
 W tryptophan          0.7          6           1
 Y tyrosine            1.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Nedd4 binding protein 1 
KIAA0323              0.128   hypothetical protein LOC23351 
KIAA1305              0.101   hypothetical protein LOC57523 
ZC3H12C               0.085   zinc finger CCCH-type containing 12C 
ZC3H12A               0.084   zinc finger CCCH-type containing 12A 
ZC3H12B               0.083   zinc finger CCCH-type containing 12B 
ZC3H12D               0.077   zinc finger CCCH-type containing 12D 
C12orf35              0.008   hypothetical protein LOC55196 
CACNA2D2              0.008   calcium channel, voltage-dependent, alpha 2/delta su...
CACNA2D2              0.008   calcium channel, voltage-dependent, alpha 2/delta su...
LOC728503             0.008   PREDICTED: hypothetical protein 
LOC728503             0.008   PREDICTED: hypothetical protein 
LOC728503             0.008   PREDICTED: hypothetical protein 
CEP63                 0.008   centrosomal protein 63 isoform a 
MYH10                 0.007   myosin, heavy polypeptide 10, non-muscle 
PHF14                 0.007   PHD finger protein 14 isoform 2 
PHF14                 0.007   PHD finger protein 14 isoform 1 
GOLGB1                0.007   golgi autoantigen, golgin subfamily b, macrogolgin ...
CENPF                 0.006   centromere protein F 
MTUS1                 0.006   mitochondrial tumor suppressor 1 isoform 5 
MTUS1                 0.006   mitochondrial tumor suppressor 1 isoform 1 
MTUS1                 0.006   mitochondrial tumor suppressor 1 isoform 2 
MTUS1                 0.006   mitochondrial tumor suppressor 1 isoform 4 
EEA1                  0.006   early endosome antigen 1, 162kD 
CGNL1                 0.006   cingulin-like 1 
POM121C               0.006   POM121 membrane glycoprotein (rat)-like 
PRL                   0.006   prolactin precursor 
MLL5                  0.006   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.006   myeloid/lymphoid or mixed-lineage leukemia 5 
SAP130                0.006   Sin3A-associated protein, 130kDa isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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